Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq522 122 1e-22 seq680 116 4e-21 >seq522 Length=10261 Score = 122 bits (134), Expect = 1e-22 Identities = 489/755 (65%), Gaps = 29/755 (4%) Strand=Plus/Minus Query 159046 TATCATAGTGAGACTGACATGATGAGATATATCTATGAGTTAGCATCAAAAGATTTCTCA 159105 ||||| |||||| || ||| | |||| || || | | | | || ||| |||| Sbjct 5154 TATCACTCTGAGACCGAGATGCTTCGATACATTCATCACCTCGAAAGCAAGGATCTCTCC 5095 Query 159106 TTAGTAAATGGTATGGTTCCACTTGGTAGTTGTACTATGAAACTAAACGCAGCATCAGAA 159165 || || || ||| |||| || || || |||||||||||| | ||||| || | ||| Sbjct 5094 TTGGTCCATTCCATGATTCCTCTCGGCAGCTGTACTATGAAATTGAACGCCACAACCGAA 5035 Query 159166 CTGATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCTAT-GATACA 159224 |||| ||||| | ||| || ||| ||||| | || ||| ||||| | ||| || Sbjct 5034 ATGATTCCTGTCACCTGGCCCGAATTTTCTAACATTCACCCATTCGCACCTGTTGAT-CA 4976 Query 159225 GACCATGGGTTATCAAAAAATTATAGATGA-CTTACAGAAATGGTTATGTGATATCACAG 159283 ||| ||||||| || | ||||| ||| |||| | | | || ||||| | Sbjct 4975 GACACGCGGTTATCTCGCCATGCTGGATGAGCTTGCAGATGACTTGAAG-GAAATCACTG 4917 Query 159284 GGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGT 159343 | |||||| | | || | ||||| || |||| | || ||||| ||||| || || Sbjct 4916 GCTTTGATGGTGTCTCTCTTCAACCCAATTCAGGCGCTCAAGGTGAATATGCTGGTCTTC 4857 Query 159344 TAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATA---AAAGAAATGTATGTTTGA 159400 | |||| || ||||| || | || | | ||| | | | ||||| ||||||| Sbjct 4856 GTGTCATCCGTGCCTACCACCATGC-TC--GTGGTGAAAGCCACCGTAATGTGTGTTTGA 4800 Query 159401 TACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTG 159460 | || ||||| || || || || |||||||| |||| ||| || ||| | ||| Sbjct 4799 TCCCTATCTCAGCTCACGGCACCAACCCTGCATCTGCAGCCATGTGTGGTATGGACATTG 4740 Query 159461 TAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAA 159520 | | ||||||| | || ||| | ||||| | ||| | |||||||| Sbjct 4739 TGATCATTCAGTGTGACAGCAAGGGTAACTTGGACATGGAGGATTT------GAAAGCAA 4686 Query 159521 T--CATGAA--TACATTTGAACTGTCATGT---ATTATGATTACATATCCATCTACACAT 159573 || || |||| || | | || || ||||| |||||||| |||| | Sbjct 4685 AGGCAGAAAAGTACAAG-GACCGATTGGGTGCTATCATGATCACATATCCTAGTACATTT 4627 Query 159574 GGTGTATTTGAAACAAACATCAGACAGAT--ATGTAAGATTGTTCATGAGAATGGTGGTC 159631 ||| | |||||| || || | ||| ||| ||| | || || | | || |||| Sbjct 4626 GGTATGTTTGAAGCAGGTGTCT--CTGATGCATGCAAGGTCGTACACCAACACGGCGGTC 4569 Query 159632 AGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACT 159691 || |||||||| ||||| || | ||||| ||| | ||| || | || || || Sbjct 4568 TCGTTTATCTTGACGGTGCCAACTTGAATGCCCAGATCGGTTTAACCAAGCCTGCAGAGA 4509 Query 159692 ATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTG 159751 ||||| || || ||||| | ||||| || ||||| ||||||||||| ||||| |||| Sbjct 4508 TCGGTGCTGACGTCTGTCACATGAACTTGCACAAGACCTTCTGTATTCCTCATGGTGGTG 4449 Query 159752 GAGGTCCTGGCGTAGGTCCTATTG-GTGTAGCAAA 159785 | || || || | || ||||| | |||| |||| Sbjct 4448 GTGGACCAGGTATGGGCCCTATCGCATGTACCAAA 4414 >seq680 Length=136445 Score = 116 bits (128), Expect = 4e-21 Identities = 175/247 (71%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 159547 ATTATGATTACATATCCATCTACACAT--GGTGTATTTGAAACAAACATCAGACAGATAT 159604 |||||| | |||||||| | ||| | ||||| || || | ||||| | || | | Sbjct 30680 ATTATGGTCACATATCC--CAGCACTTTCGGTGTCTTCGAGCCCGGCATCAAAGAGGTCT 30737 Query 159605 GTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCAC 159664 | ||||| || || || |||| |||||||| ||| | || ||||| || | ||||||| Sbjct 30738 GCAAGATCGTGCACGAATATGGCGGTCAGGTCTATATGGACGGTGCCAACATGAATGCAC 30797 Query 159665 AGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATA 159724 || | || || || | || ||| |||||||| || || | ||| |||| | Sbjct 30798 AGATTGGACTTTGCTCTCCTGGAGAGATTGGAGCAGATGTCTGCCACTTGAACCTACACA 30857 Query 159725 AGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAA 159784 |||| ||||||||||| || || ||||| || |||||||| || || |||||||| || Sbjct 30858 AGACCTTCTGTATTCCTCACGGCGGTGGTGGCCCTGGCGTGGGACCCATTGGTGTTGCTG 30917 Query 159785 AACATCT 159791 | ||||| Sbjct 30918 AGCATCT 30924 Score = 109 bits (120), Expect = 6e-19 Identities = 186/270 (69%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 158421 TGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCA 158480 ||||||||| | || || || || | ||| |||| ||||| | |||||| ||||| Sbjct 29503 TGACATTGCATTTGGAAGCGCTCAGAGACTGGGTGTTCCCATGGGCTTCGGAGGCCCTCA 29562 Query 158481 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 158540 |||||| ||||| | | || ||||| ||| | ||||| ||||| | |||| || Sbjct 29563 TGCTGCTTTCTTCTCTTGTGCGGATAAGTACAAGCGTAAGATCCCTGGACGCCTTGTTGG 29622 Query 158541 TCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 158600 | ||| ||||| || || || ||| | || || |||||||||||||| Sbjct 29623 TGTCTCAAAGGATAGACTGGGAAACCGTGCTCTTAGACTGGCGCTCCAGACTAGAGAGCA 29682 Query 158601 GCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAA 158660 ||| || | | || || |||||||| ||||| |||||||| ||||| |||| || || Sbjct 29683 GCACATTCGTCGTGAAAAGGCAACCAGCAACATTTGCACAGCGCAAGCCTTGCTCGCCAA 29742 Query 158661 TATGTCTGGGTTCTATGCAGCATATCATGG 158690 ||| || | ||||||| || ||||| Sbjct 29743 CATGAGTGCCATGTATGCAGTCTACCATGG 29772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588045003410480