Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq812 168 1e-36
seq609 127 5e-24
seq810 120 7e-22
seq799 93.3 9e-14
>seq812
Length=913560
Score = 168 bits (186), Expect = 1e-36
Identities = 165/210 (79%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990
|||||||| ||||| ||||| || ||||| |||||||||| |||| || | ||||||||
Sbjct 528771 ACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAG-GTGCGGCCATCTTC 528829
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
| ||||||||| || |||||||| || || ||||| ||||| ||||||||||| |||||
Sbjct 528830 CAACTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTG 528889
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || ||||||||| || ||||| || || ||| ||||| || |||| |||||
Sbjct 528890 GATCTTGCTCTTGACGTTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGTCTT 528949
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| ||| || ||||| | |||||
Sbjct 528950 GCCGGTCAGAGTCTTGACGAAAATCTGCAT 528979
Score = 123 bits (136), Expect = 6e-23
Identities = 161/220 (73%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTC 194980
||||| || ||| ||||| || || || || || || || ||||| |||| |||| || |
Sbjct 528533 GAGTCGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACAAG-GTAC 528591
Query 194981 TCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTT 195040
|| || || ||||||||||| || ||||| || || || ||||| ||||| || ||||
Sbjct 528592 GACCGTCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACCTT 528651
Query 195041 CTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGG 195100
| ||||||||||| || ||| ||||| ||||| ||||| ||| || || | |
Sbjct 528652 CCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATTGTGTCGCTGGATTCAACCTCCAATG 528711
Query 195101 TAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| | ||||| || |||||||| || || || | |||||
Sbjct 528712 TGATAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751
Score = 118 bits (130), Expect = 2e-21
Identities = 137/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || |||||||| || || || ||||| || | || || | || || ||
Sbjct 529227 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCGTCCTCA 529286
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || ||||| ||||| || || || ||||| ||
Sbjct 529287 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGG 529346
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || ||||||||||| || || || ||||| | ||||||
Sbjct 529347 ATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTT 529406
Query 195112 CCTGT 195116
|| ||
Sbjct 529407 CCAGT 529411
>seq609
Length=32548
Score = 127 bits (140), Expect = 5e-24
Identities = 124/157 (79%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTT 194989
||| | |||||| || || || |||||||| |||||||| |||| || | || ||||
Sbjct 21002 AACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAG-GTACGACCGTCTT 20944
Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049
|||| || ||||| ||||| || || |||||||| || ||||| || ||||| || ||||
Sbjct 20943 CGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTT 20884
Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT 195086
| || ||||||||||| || ||||||||||| || ||
Sbjct 20883 GGATCTTTTGCTTGACATTGTCAATGGTGTCAGAGCT 20847
>seq810
Length=1034423
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| ||| ||||| | ||||||||||||||||| || ||||||||
Sbjct 583009 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATC 582950
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || ||||| || |||||||| || ||||| || || || ||||||||| ||
Sbjct 582949 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 582890
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| ||||| || || || || ||||||| ||||| || |||| || || |||||
Sbjct 582889 ATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 582831
>seq799
Length=343686
Score = 93.3 bits (102), Expect = 9e-14
Identities = 93/121 (77%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| || ||||| || || || ||||| || | ||||| | || || |||
Sbjct 28783 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGACCGTCCTCG 28842
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| |||||||| || || || ||||| || || || || || |||||| ||
Sbjct 28843 AGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTGGA 28902
Query 195052 A 195052
|
Sbjct 28903 A 28903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109469616558581
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |