Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq205 221 1e-51
seq180 107 2e-17
seq78 105 5e-17
seq609 100 2e-15
seq294 93.3 3e-13
seq812 87.8 1e-11
seq23 87.8 1e-11
>seq205
Length=39400
Score = 221 bits (244), Expect = 1e-51
Identities = 483/713 (68%), Gaps = 18/713 (3%)
Strand=Plus/Minus
Query 551895 GCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACT 551954
||| | |||||||| | |||||||| ||| | || || || | | || |||| | ||
Sbjct 4277 GCTGTCCGTCGTCTTCGTACTGCTTGTGAACGTGCTAAGCGTACCTTGTCTTCTGCTGCT 4218
Query 551955 CAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTT-- 552012
|||||||| || ||| | || || | || || || |||| | ||| ||| |||
Sbjct 4217 CAAACCACCATCGAAATCGACTCTCTCTTCGAAGGTGTTGACTTC--TACACCTCTTTGA 4160
Query 552013 CGAGGGCCAAATTTGAAGATATTTGTTCT-GATCTCTTTAGAAAAACAATTGAACCAGTA 552071
| | || || ||||| ||| | |||||||| | || || || ||||| ||
Sbjct 4159 CTCGTGCTCGTTTCGAAGA-ATTGAACCAAGATCTCTTCCGTAATACCATGGAACCTGTC 4101
Query 552072 GAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTT 552131
||| | || | | || || |||||||| || || |||| || || ||||| || ||
Sbjct 4100 GAAAAGGTCCTTCGTGACTCCAAGATTGACAAGTCTCAAGTTCACGATATTGTCCTCGTC 4041
Query 552132 GGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGT 552188
||||| || || | ||||| || ||| ||| ||| |||| | ||| || |||
Sbjct 4040 GGTGGTTCCACCCGTATTCCCAAGGTTC---AAAAGTTGGTTTCTGACTTCTTCAACGGT 3984
Query 552189 AAAAAATTAAATGAAAGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTC 552246
|| || || |||| | || || ||||| ||||||||||||||||| || | |
Sbjct 3983 AAGGAACCCAAC--AAGTCCATCAACCCTGATGAAGCTGTTGCCTATGGTGCTGCTGTCC 3926
Query 552247 AAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATG 552306
|||| || ||||| ||||| | ||| ||||| ||| | || | ||| | || |
Sbjct 3925 AAGCTGCCATTCTCTCTGGTGACACTTCCGAAAAGACCCAAGACCTTCTTCTTTTGGACG 3866
Query 552307 TTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATA 552366
|| ||||||| || || ||| | ||||| | ||| ||| | |||||| ||||||| |
Sbjct 3865 TTGCTCCTCTTTCCCTCGGTATTGAAACCGCTGGTGGTGTCATGACTGCTCTTATCAAGC 3806
Query 552367 GAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAA 552426
| || || ||| |||| || || || | || ||||| || | ||||| |||
Sbjct 3805 GTAACACCACTGTTCCCACCAAGAAGTCCGAAATCTTCTCTACCTACGCCGATAACCAAC 3746
Query 552427 CTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAAC 552486
||| ||| || ||| ||| ||||| ||| | || || ||||| || | |
Sbjct 3745 CTGGTGTCCTCATCCAAGTTTACGAAGGTGAACGTGCTCGTACCAAGGATAACAACCTTC 3686
Query 552487 TTGGT-ACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAA 552545
| ||| | || || ||| |||||||||||||| |||||||| || || ||||| |||
Sbjct 3685 TCGGTAAGTTCGAACTTA-CTGGTATTCCTCCTGCCCCTCGTGGTGTTCCTCAAATCGAA 3627
Query 552546 GTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598
|||||||||||| | |||||||| || || ||||| || ||||| ||| ||
Sbjct 3626 GTTACTTTCGATGTTGATGCCAACGGTATCTTGAACGTCTCTGCTCTTGACAA 3574
Score = 129 bits (142), Expect = 5e-24
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 550024 TTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAG 550083
||||||||||||||||||||| | | |||||||| |||||||| ||||| |||||| |
Sbjct 5061 TTGTGTTGGTGTTTGGCAAAACGATCGTGTTGAAATCATTGCCAACGATCAGGGTAACCG 5002
Query 550084 AACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAA 550143
|| || || ||||||||| |||||| || ||||||| | | ||||||| || || ||
Sbjct 5001 TACCACCCCCTCTTATGTTGGTTTCACCGACACTGAACGTCTCATTGGTGACGCTGCCAA 4942
Query 550144 ATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAG 550203
| |||| | | || ||| |||||| | ||||| || || ||||| || || |
Sbjct 4941 GAACCAAGTCGCCATGAACCCTTACAATACCGTCTTTGACGCCAAGCGTTTGATCGGTCG 4882
Query 550204 AAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTC 550252
| || || || | ||||| | || |||||||| ||||| |||
Sbjct 4881 TCGCTTCAACGAACCCGAAGTTCAATCTGACATGAAGCACTGGCCCTTC 4833
>seq180
Length=12114
Score = 107 bits (118), Expect = 2e-17
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 550024 TTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAG 550083
|||||||||||| ||| || | |||||||| |||||||| || ||||||||| |
Sbjct 993 TTGTGTTGGTGTCTGGGAATCCGAACGTGTTGAAATCATTGCCAACGAGCAAGGTAACCG 934
Query 550084 AACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAA 550143
|||||||| || ||||| ||||| | || | || | | | |||||||||| || ||
Sbjct 933 TACTACTCCCTCCTATGTCGCTTTCTCTGACAAGGAGCGTCTCATTGGTGATGCTGCCAA 874
Query 550144 ATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAG 550203
| ||||| | || || | || || | || |||||||| ||||| || || |
Sbjct 873 GAACCAAGCTGCCATGAACCCCAAGAACACCGTCTTCGATGCTAAGCGTTTGATCGGTCG 814
Query 550204 AAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTC 550252
|||| ||||| | ||| |||| || |||||||| ||||| |||
Sbjct 813 TCGTTTCGATGATGCCGATGTCAAGGCTGACATGAAGCACTGGCCCTTC 765
>seq78
Length=13793
Score = 105 bits (116), Expect = 5e-17
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 550025 TGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGA 550084
||||||||||||||| || | ||||||||||||||||| || ||||||||| |
Sbjct 10405 TGTGTTGGTGTTTGGGAATCCGAACGTGTTGAAATTATTGCCAACGAACAAGGTAACCGT 10346
Query 550085 ACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAA 550144
|| ||||| || ||||| ||||| | || | || | | | |||||||||| || ||
Sbjct 10345 ACCACTCCCTCCTATGTCGCTTTCTCTGATAAGGAGCGTCTCATTGGTGATGCTGCCAAG 10286
Query 550145 TATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGA 550204
| ||||| | || || | || || |||| || || || ||||| || || |
Sbjct 10285 AACCAAGCTGCCATGAACCCCAAGAACACCGTTTTCGACGCCAAGCGTTTGATCGGTCGT 10226
Query 550205 AGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTC 550252
|||| ||||| | ||| |||| || |||||| | |||||||||
Sbjct 10225 CGTTTCGATGATCCTGATGTCAAGGCTGACATGAAGAACTGGCCTTTC 10178
Score = 93.3 bits (102), Expect = 3e-13
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 550436 CAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATC 550495
||||||||||||||||| ||||| || |||||||| ||| ||||||||||||| |||
Sbjct 9886 CAACGTCAAGCTACTAAGGATGCCGGTGTCATTGCTGGTCTTGATGTTCTTCGTATCATC 9827
Query 550496 AATGAACCTACTGCTGCTG 550514
|| ||||| ||||||||||
Sbjct 9826 AACGAACCCACTGCTGCTG 9808
>seq609
Length=32548
Score = 100 bits (110), Expect = 2e-15
Identities = 118/160 (74%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|||||||| || | ||||||||| ||| || ||| ||||||||| | || |
Sbjct 21010 AGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGA 20951
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
||||| |||||||| ||||| ||||| || | ||| ||||||||||| || |||||
Sbjct 20950 CCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCC 20891
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG 563416
|||||||| || ||||| || || ||||| || ||||
Sbjct 20890 TTATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCAG 20851
>seq294
Length=30982
Score = 93.3 bits (102), Expect = 3e-13
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
|||| || || ||||| || || || || || || | |||||||||||||| || ||||
Sbjct 26424 ATGCTGTCATCACTGTCCCTGCCTACTTCAACGATGCTCAACGTCAAGCTACCAAGGATG 26365
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
|||| ||||| || ||| |||| | ||| | ||||| ||||||||||| |||||
Sbjct 26364 CTGGTAAGATTGCCGGTCTTGATGTCTTGCGTGTCATCAACGAACCTACTGCCGCTGCCT 26305
Query 550518 TTGCATATGGACTTGATAA 550536
| || || || ||||| ||
Sbjct 26304 TGGCTTACGGTCTTGACAA 26286
>seq812
Length=913560
Score = 87.8 bits (96), Expect = 1e-11
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|| ||||| ||||| || || ||| || || ||| |||||||| | | || |
Sbjct 528762 AGGCGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGG 528821
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
|||||| | || || || ||||| ||||| | ||||| || ||||| || ||||||
Sbjct 528822 CCATCTTCCAACTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCT 528881
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435
|||||||| || || || || || || ||||| | || | | ||| |||||
Sbjct 528882 TTATCTTGGATCTTGCTCTTGACGTTATCGATGGTATCTG-ACGATTCGACTTCCAGAGT 528940
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|| ||| || || || ||||| || |||||||| ||||||
Sbjct 528941 AATAGTCTTGCCGGTCAGAGTCTTGACGAAAATCTGCATA 528980
>seq23
Length=29979
Score = 87.8 bits (96), Expect = 1e-11
Identities = 142/200 (71%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 993859 ATCAACTTCAAGAGTTCGATCATATCTAACAGAATCTTTACCCAAAAAATCTAATCTAAT 993918
||||||||| | ||| | ||||| || ||||||||||||||| ||||| || ||
Sbjct 10829 ATCAACTTCGACAGTATTTTGATATCGAATAGAATCTTTACCCAAGAAATCAAAATGAAG 10770
Query 993919 TTTATCA--TTATTCAATAAATCAATATGTTCCACACGTAAAGATGTTACA-CCTACTGT 993975
||| | ||| | | || || ||||| ||| | ||| | ||| || |||||
Sbjct 10769 GGTATTTGGTGGTTCCA--ATTCGATGTGTTCATAACGAAGAGA-GCAACAGCCAACTGT 10713
Query 993976 ATCAGTTTCGTCTTCTCCTTTTTCATTACCAACACGCAATGCAAATTTATCAATAAAATA 994035
||| | |||||| || || |||||||||||| | | || || ||| | ||||| |||||
Sbjct 10712 ATCCGCTTCGTCCTCGCCCTTTTCATTACCAGCTCTTAAAGCTAATCTGTCAATTAAATA 10653
Query 994036 TAATGCTGTTGCTATTTGTC 994055
| ||||| ||| ||||||
Sbjct 10652 CATGGCTGTGGCTCTTTGTC 10633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029251418358070
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |