Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq205 221 1e-51 seq180 107 2e-17 seq78 105 5e-17 seq609 100 2e-15 seq294 93.3 3e-13 seq812 87.8 1e-11 seq23 87.8 1e-11 >seq205 Length=39400 Score = 221 bits (244), Expect = 1e-51 Identities = 483/713 (68%), Gaps = 18/713 (3%) Strand=Plus/Minus Query 551895 GCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACT 551954 ||| | |||||||| | |||||||| ||| | || || || | | || |||| | || Sbjct 4277 GCTGTCCGTCGTCTTCGTACTGCTTGTGAACGTGCTAAGCGTACCTTGTCTTCTGCTGCT 4218 Query 551955 CAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTT-- 552012 |||||||| || ||| | || || | || || || |||| | ||| ||| ||| Sbjct 4217 CAAACCACCATCGAAATCGACTCTCTCTTCGAAGGTGTTGACTTC--TACACCTCTTTGA 4160 Query 552013 CGAGGGCCAAATTTGAAGATATTTGTTCT-GATCTCTTTAGAAAAACAATTGAACCAGTA 552071 | | || || ||||| ||| | |||||||| | || || || ||||| || Sbjct 4159 CTCGTGCTCGTTTCGAAGA-ATTGAACCAAGATCTCTTCCGTAATACCATGGAACCTGTC 4101 Query 552072 GAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTT 552131 ||| | || | | || || |||||||| || || |||| || || ||||| || || Sbjct 4100 GAAAAGGTCCTTCGTGACTCCAAGATTGACAAGTCTCAAGTTCACGATATTGTCCTCGTC 4041 Query 552132 GGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGT 552188 ||||| || || | ||||| || ||| ||| ||| |||| | ||| || ||| Sbjct 4040 GGTGGTTCCACCCGTATTCCCAAGGTTC---AAAAGTTGGTTTCTGACTTCTTCAACGGT 3984 Query 552189 AAAAAATTAAATGAAAGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTC 552246 || || || |||| | || || ||||| ||||||||||||||||| || | | Sbjct 3983 AAGGAACCCAAC--AAGTCCATCAACCCTGATGAAGCTGTTGCCTATGGTGCTGCTGTCC 3926 Query 552247 AAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATG 552306 |||| || ||||| ||||| | ||| ||||| ||| | || | ||| | || | Sbjct 3925 AAGCTGCCATTCTCTCTGGTGACACTTCCGAAAAGACCCAAGACCTTCTTCTTTTGGACG 3866 Query 552307 TTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATA 552366 || ||||||| || || ||| | ||||| | ||| ||| | |||||| ||||||| | Sbjct 3865 TTGCTCCTCTTTCCCTCGGTATTGAAACCGCTGGTGGTGTCATGACTGCTCTTATCAAGC 3806 Query 552367 GAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAA 552426 | || || ||| |||| || || || | || ||||| || | ||||| ||| Sbjct 3805 GTAACACCACTGTTCCCACCAAGAAGTCCGAAATCTTCTCTACCTACGCCGATAACCAAC 3746 Query 552427 CTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAAC 552486 ||| ||| || ||| ||| ||||| ||| | || || ||||| || | | Sbjct 3745 CTGGTGTCCTCATCCAAGTTTACGAAGGTGAACGTGCTCGTACCAAGGATAACAACCTTC 3686 Query 552487 TTGGT-ACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAA 552545 | ||| | || || ||| |||||||||||||| |||||||| || || ||||| ||| Sbjct 3685 TCGGTAAGTTCGAACTTA-CTGGTATTCCTCCTGCCCCTCGTGGTGTTCCTCAAATCGAA 3627 Query 552546 GTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 |||||||||||| | |||||||| || || ||||| || ||||| ||| || Sbjct 3626 GTTACTTTCGATGTTGATGCCAACGGTATCTTGAACGTCTCTGCTCTTGACAA 3574 Score = 129 bits (142), Expect = 5e-24 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 550024 TTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAG 550083 ||||||||||||||||||||| | | |||||||| |||||||| ||||| |||||| | Sbjct 5061 TTGTGTTGGTGTTTGGCAAAACGATCGTGTTGAAATCATTGCCAACGATCAGGGTAACCG 5002 Query 550084 AACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAA 550143 || || || ||||||||| |||||| || ||||||| | | ||||||| || || || Sbjct 5001 TACCACCCCCTCTTATGTTGGTTTCACCGACACTGAACGTCTCATTGGTGACGCTGCCAA 4942 Query 550144 ATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAG 550203 | |||| | | || ||| |||||| | ||||| || || ||||| || || | Sbjct 4941 GAACCAAGTCGCCATGAACCCTTACAATACCGTCTTTGACGCCAAGCGTTTGATCGGTCG 4882 Query 550204 AAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTC 550252 | || || || | ||||| | || |||||||| ||||| ||| Sbjct 4881 TCGCTTCAACGAACCCGAAGTTCAATCTGACATGAAGCACTGGCCCTTC 4833 >seq180 Length=12114 Score = 107 bits (118), Expect = 2e-17 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 550024 TTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAG 550083 |||||||||||| ||| || | |||||||| |||||||| || ||||||||| | Sbjct 993 TTGTGTTGGTGTCTGGGAATCCGAACGTGTTGAAATCATTGCCAACGAGCAAGGTAACCG 934 Query 550084 AACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAA 550143 |||||||| || ||||| ||||| | || | || | | | |||||||||| || || Sbjct 933 TACTACTCCCTCCTATGTCGCTTTCTCTGACAAGGAGCGTCTCATTGGTGATGCTGCCAA 874 Query 550144 ATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAG 550203 | ||||| | || || | || || | || |||||||| ||||| || || | Sbjct 873 GAACCAAGCTGCCATGAACCCCAAGAACACCGTCTTCGATGCTAAGCGTTTGATCGGTCG 814 Query 550204 AAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTC 550252 |||| ||||| | ||| |||| || |||||||| ||||| ||| Sbjct 813 TCGTTTCGATGATGCCGATGTCAAGGCTGACATGAAGCACTGGCCCTTC 765 >seq78 Length=13793 Score = 105 bits (116), Expect = 5e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 550025 TGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGA 550084 ||||||||||||||| || | ||||||||||||||||| || ||||||||| | Sbjct 10405 TGTGTTGGTGTTTGGGAATCCGAACGTGTTGAAATTATTGCCAACGAACAAGGTAACCGT 10346 Query 550085 ACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAA 550144 || ||||| || ||||| ||||| | || | || | | | |||||||||| || || Sbjct 10345 ACCACTCCCTCCTATGTCGCTTTCTCTGATAAGGAGCGTCTCATTGGTGATGCTGCCAAG 10286 Query 550145 TATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGA 550204 | ||||| | || || | || || |||| || || || ||||| || || | Sbjct 10285 AACCAAGCTGCCATGAACCCCAAGAACACCGTTTTCGACGCCAAGCGTTTGATCGGTCGT 10226 Query 550205 AGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTC 550252 |||| ||||| | ||| |||| || |||||| | ||||||||| Sbjct 10225 CGTTTCGATGATCCTGATGTCAAGGCTGACATGAAGAACTGGCCTTTC 10178 Score = 93.3 bits (102), Expect = 3e-13 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 550436 CAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATC 550495 ||||||||||||||||| ||||| || |||||||| ||| ||||||||||||| ||| Sbjct 9886 CAACGTCAAGCTACTAAGGATGCCGGTGTCATTGCTGGTCTTGATGTTCTTCGTATCATC 9827 Query 550496 AATGAACCTACTGCTGCTG 550514 || ||||| |||||||||| Sbjct 9826 AACGAACCCACTGCTGCTG 9808 >seq609 Length=32548 Score = 100 bits (110), Expect = 2e-15 Identities = 118/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| || | ||||||||| ||| || ||| ||||||||| | || | Sbjct 21010 AGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGA 20951 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| |||||||| ||||| ||||| || | ||| ||||||||||| || ||||| Sbjct 20950 CCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCC 20891 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG 563416 |||||||| || ||||| || || ||||| || |||| Sbjct 20890 TTATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCAG 20851 >seq294 Length=30982 Score = 93.3 bits (102), Expect = 3e-13 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || || ||||| || || || || || || | |||||||||||||| || |||| Sbjct 26424 ATGCTGTCATCACTGTCCCTGCCTACTTCAACGATGCTCAACGTCAAGCTACCAAGGATG 26365 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| ||||| || ||| |||| | ||| | ||||| ||||||||||| ||||| Sbjct 26364 CTGGTAAGATTGCCGGTCTTGATGTCTTGCGTGTCATCAACGAACCTACTGCCGCTGCCT 26305 Query 550518 TTGCATATGGACTTGATAA 550536 | || || || ||||| || Sbjct 26304 TGGCTTACGGTCTTGACAA 26286 >seq812 Length=913560 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 || ||||| ||||| || || ||| || || ||| |||||||| | | || | Sbjct 528762 AGGCGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGG 528821 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | || || || ||||| ||||| | ||||| || ||||| || |||||| Sbjct 528822 CCATCTTCCAACTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCT 528881 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 |||||||| || || || || || || ||||| | || | | ||| ||||| Sbjct 528882 TTATCTTGGATCTTGCTCTTGACGTTATCGATGGTATCTG-ACGATTCGACTTCCAGAGT 528940 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || ||| || || || ||||| || |||||||| |||||| Sbjct 528941 AATAGTCTTGCCGGTCAGAGTCTTGACGAAAATCTGCATA 528980 >seq23 Length=29979 Score = 87.8 bits (96), Expect = 1e-11 Identities = 142/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 993859 ATCAACTTCAAGAGTTCGATCATATCTAACAGAATCTTTACCCAAAAAATCTAATCTAAT 993918 ||||||||| | ||| | ||||| || ||||||||||||||| ||||| || || Sbjct 10829 ATCAACTTCGACAGTATTTTGATATCGAATAGAATCTTTACCCAAGAAATCAAAATGAAG 10770 Query 993919 TTTATCA--TTATTCAATAAATCAATATGTTCCACACGTAAAGATGTTACA-CCTACTGT 993975 ||| | ||| | | || || ||||| ||| | ||| | ||| || ||||| Sbjct 10769 GGTATTTGGTGGTTCCA--ATTCGATGTGTTCATAACGAAGAGA-GCAACAGCCAACTGT 10713 Query 993976 ATCAGTTTCGTCTTCTCCTTTTTCATTACCAACACGCAATGCAAATTTATCAATAAAATA 994035 ||| | |||||| || || |||||||||||| | | || || ||| | ||||| ||||| Sbjct 10712 ATCCGCTTCGTCCTCGCCCTTTTCATTACCAGCTCTTAAAGCTAATCTGTCAATTAAATA 10653 Query 994036 TAATGCTGTTGCTATTTGTC 994055 | ||||| ||| |||||| Sbjct 10652 CATGGCTGTGGCTCTTTGTC 10633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029251418358070