Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq744 210 3e-49
>seq744
Length=38458
Score = 210 bits (232), Expect = 3e-49
Identities = 314/444 (71%), Gaps = 4/444 (1%)
Strand=Plus/Plus
Query 37165 TAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAG 37224
|||| || | ||| ||||| ||| ||| | |||||||| | || |||||||||||
Sbjct 30822 TAAATAAAAGACAAGCAAAGTCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGC 30881
Query 37225 AAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATC 37284
|| || || || ||||| ||||| | ||| || | |||||| || | ||||| || |
Sbjct 30882 TGAATGTCAAACCAGGCATCAAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAAC 30941
Query 37285 CAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAAC 37344
|||| |||||||||||||| || || ||||| || |||||||| | | |||| |||
Sbjct 30942 CAGAGAAGAAAATACCTTCGACAGCAGCAAAGGCAACAAGACGCTCAGCAAAAG---AAC 30998
Query 37345 TATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTT 37404
| | |||||||| || | |||||| |||||| ||| | ||| || || |
Sbjct 30999 CGTTAGAGGAAATCCACTTGAAGGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGT 31058
Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464
|||| || ||||| | | ||| |||| ||||| | |||||||| ||||| | |
Sbjct 31059 CAATAGCAGAAAAGAGCATTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAA 31118
Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524
||| || |||| | ||||||||||||||| || ||||| ||||| ||||| |||
Sbjct 31119 GACTGTAAGTTTCTGCGTGAATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAG 31178
Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584
|||||| | | || || | | |||| | | | | |||||||||||||| || ||||
Sbjct 31179 CTTCAGGAATCTTGACTTCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCAT 31238
Query 37585 CACTAGCTGCAAAGAAAGC-AAGA 37607
| | | |||||||| || ||||
Sbjct 31239 CTGAACCAGCAAAGAAGGCTAAGA 31262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592310558461720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |