Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq744 210 3e-49 >seq744 Length=38458 Score = 210 bits (232), Expect = 3e-49 Identities = 314/444 (71%), Gaps = 4/444 (1%) Strand=Plus/Plus Query 37165 TAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAG 37224 |||| || | ||| ||||| ||| ||| | |||||||| | || ||||||||||| Sbjct 30822 TAAATAAAAGACAAGCAAAGTCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGC 30881 Query 37225 AAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATC 37284 || || || || ||||| ||||| | ||| || | |||||| || | ||||| || | Sbjct 30882 TGAATGTCAAACCAGGCATCAAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAAC 30941 Query 37285 CAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAAC 37344 |||| |||||||||||||| || || ||||| || |||||||| | | |||| ||| Sbjct 30942 CAGAGAAGAAAATACCTTCGACAGCAGCAAAGGCAACAAGACGCTCAGCAAAAG---AAC 30998 Query 37345 TATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTT 37404 | | |||||||| || | |||||| |||||| ||| | ||| || || | Sbjct 30999 CGTTAGAGGAAATCCACTTGAAGGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGT 31058 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 |||| || ||||| | | ||| |||| ||||| | |||||||| ||||| | | Sbjct 31059 CAATAGCAGAAAAGAGCATTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAA 31118 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 ||| || |||| | ||||||||||||||| || ||||| ||||| ||||| ||| Sbjct 31119 GACTGTAAGTTTCTGCGTGAATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAG 31178 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||||| | | || || | | |||| | | | | |||||||||||||| || |||| Sbjct 31179 CTTCAGGAATCTTGACTTCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCAT 31238 Query 37585 CACTAGCTGCAAAGAAAGC-AAGA 37607 | | | |||||||| || |||| Sbjct 31239 CTGAACCAGCAAAGAAGGCTAAGA 31262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592310558461720