Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq812 132 4e-26
seq609 98.7 8e-16
>seq812
Length=913560
Score = 132 bits (146), Expect = 4e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| || ||||| || || || || |||||||||| | || | | |||| ||||| |||
Sbjct 528777 TGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCTTCCAACTGC 528836
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| ||||| || | |||||| || ||||| || ||||||||||||||||| || ||
Sbjct 528837 TTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTGGATCTTG 528896
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | || || |||| ||| ||||| ||||| | || ||||||||
Sbjct 528897 CTCTTGACGTTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGTCTTGCCGGTC 528956
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||| || || || ||||||||
Sbjct 528957 AGAGTCTTGACGAAAATCTGCAT 528979
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||||||||| || || || ||||| |||| | || | | || |||| |||
Sbjct 528549 TGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCGTCCTCCAGCTGC 528608
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| ||||| |||| ||||| || || || || || ||||| || |||||||| ||
Sbjct 528609 TTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCTTG 528668
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | ||||| | ||| || || | |||| || ||||| ||
Sbjct 528669 CTCTTCACGTTGTCAATTGTGTCGCTGGATTCAACCTCCAATGTGATAGTCTTGCCAGTC 528728
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
||||| || ||||| ||||||||
Sbjct 528729 AAAGTCTTAACAAAAATCTGCAT 528751
>seq609
Length=32548
Score = 98.7 bits (108), Expect = 8e-16
Identities = 117/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| || |||||||||||||| ||||| || |||||||| | || | |
Sbjct 21008 ACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACC 20949
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
|| || | ||| ||||| || || || | ||| |||||||| || || || ||||| ||
Sbjct 20948 GTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTT 20889
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGA 101412
|||||| || ||||| || ||| | || | ||||||||
Sbjct 20888 ATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCAGA 20850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396274328610951
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |