Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq812 132 4e-26 seq609 98.7 8e-16 >seq812 Length=913560 Score = 132 bits (146), Expect = 4e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || ||||| || || || || |||||||||| | || | | |||| ||||| ||| Sbjct 528777 TGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCTTCCAACTGC 528836 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| || | |||||| || ||||| || ||||||||||||||||| || || Sbjct 528837 TTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTGGATCTTG 528896 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | || || |||| ||| ||||| ||||| | || |||||||| Sbjct 528897 CTCTTGACGTTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGTCTTGCCGGTC 528956 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||| || || || |||||||| Sbjct 528957 AGAGTCTTGACGAAAATCTGCAT 528979 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||||||||| || || || ||||| |||| | || | | || |||| ||| Sbjct 528549 TGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCGTCCTCCAGCTGC 528608 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| |||| ||||| || || || || || ||||| || |||||||| || Sbjct 528609 TTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCTTG 528668 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| | ||| || || | |||| || ||||| || Sbjct 528669 CTCTTCACGTTGTCAATTGTGTCGCTGGATTCAACCTCCAATGTGATAGTCTTGCCAGTC 528728 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 ||||| || ||||| |||||||| Sbjct 528729 AAAGTCTTAACAAAAATCTGCAT 528751 >seq609 Length=32548 Score = 98.7 bits (108), Expect = 8e-16 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || |||||||||||||| ||||| || |||||||| | || | | Sbjct 21008 ACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACC 20949 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 || || | ||| ||||| || || || | ||| |||||||| || || || ||||| || Sbjct 20948 GTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTT 20889 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGA 101412 |||||| || ||||| || ||| | || | |||||||| Sbjct 20888 ATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCAGA 20850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396274328610951