Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq578 230 4e-55 seq657 203 6e-47 >seq578 Length=440600 Score = 230 bits (254), Expect = 4e-55 Identities = 722/1107 (65%), Gaps = 46/1107 (4%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| ||| ||||||| | ||||| || ||||||||||||||||| Sbjct 117211 ACGGTGAACTGAATAGGAGCAGAAGCAGCCATAGTGCGAAGGTAGTACATGCCGGTCTTC 117152 Query 212613 AGGCCCTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGG 212672 || ||| | ||| || | |||||| |||| |||| | || || || Sbjct 117151 AGACCCATCTTCCATCCAGCGAAGTGCATACTGGTGA---TCTTGCCCATAGTAGGCTC- 117096 Query 212673 TCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTG 212732 |||| || || | ||| ||||||||| |||||| ||| | | | | | | Sbjct 117095 ----CCTCATG-------TGGATGTTAAGGGACTGAGACTGGTCAATGTACGCGCCACGG 117047 Query 212733 TCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCT 212792 || || ||||| | | ||| | ||| |||| |||||||| |||||| | | | Sbjct 117046 TCTGCAGCCATCTGAAGGATGGTACGCTGAGAGATTTCCCACACAGTCTTGTACAGAGCC 116987 Query 212793 TTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCC--CCTGTGTA-TGGTCAGC 212849 |||| ||| | || | | |||||||||||| || || || ||| | | || | | Sbjct 116986 TTGATGTCGGCAGGAATGTTGGGGATGTTCTGGACGGAACCTCCCTCGGCAATGATACGG 116927 Query 212850 TGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCC-AGGCACTTGACCAGGTGAGG 212908 | | ||||| || ||| | ||| |||| | || ||| | ||| ||| Sbjct 116926 TTCTT---CATGTTGTCAGACCACAAGCCGA-GGTCGACGAGATCCTTCAGCAGCCAAGG 116871 Query 212909 GTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGG 212968 ||| || | |||||| || || | || || | | ||| | ||| |||||||| || Sbjct 116870 GTTAACGACCTGGAACTCTCCCGCAAGGACACGACGAGAGTAGATGTTCGAAGTGTATGG 116811 Query 212969 CTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCAC 213028 |||| || |||||| ||||| ||||| || ||||| |||||||||||||| || Sbjct 116810 TTCGAAGCATTCGTTGAAGCCCAGGATCTGACTGGTACTGGCCGTGGGCATGGGAGCAAC 116751 Query 213029 CAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGC-CCAGTCCC 213087 || | ||||| | || || |||| | | || |||| | | |||||||| Sbjct 116750 GAGCAAGCTGTTGCGGACACCATGCTTGGCAATCTC-CGCCTTCAGTGAACTCCAGTCCC 116692 Query 213088 ATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGC 213147 | | ||| || || |||| |||||||| |||| | |||||| | Sbjct 116691 AAAGGTCAGTAGGGGTCTTGTCC---------CACATGTCGTACTGAAGGATGCCCTGAG 116641 Query 213148 TCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACG 213207 | ||| ||| | ||||||||||| | ||| ||||||||||| || ||| ||| | Sbjct 116640 AGATGGGAGAGCCTTCATAAGAGGAGTATGTGCCCTGCTCCTTGGCAAGTTCGACGGATG 116581 Query 213208 CCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTG 213267 | || ||| ||| ||||||||| ||||| |||| ||||||||| ||||||||| | Sbjct 116580 CAGTCAAAGCACCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGCTGCTTGGCCTCCG 116521 Query 213268 GGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGC 213327 | || ||| |||| | |||| | ||||| || || | || || | | Sbjct 116520 GAGAGTCGAACGGCAGACGGAGAGCCAGGAAGGCGTCAGCAAGACCGTTAACACCAACGG 116461 Query 213328 CGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGT 213387 | ||||| | ||| | || ||| ||| | |||| | |||||| ||||| || Sbjct 116460 CAATGGGGCGGTGGCGCAAGTTGCTCTTCTTGGCCTCCGGAACGGGGTAGTAGTTGATGT 116401 Query 213388 CGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGAT 213447 |||| |||||||| |||||||| | || | |||||| | || | | || || Sbjct 116400 CGATAATCTTGTTCAGGTTGCGAACCACAACCTGGGTGACTT----CATGCAGTC-TG-C 116347 Query 213448 TGAACACGTA--GCCCCCGTCCTGCACAAACTCA----GGCAGGGCGATGCTGGCCAGGT 213501 || |||| || || | ||| ||| | ||||| || | ||||| || Sbjct 116346 CAAAGTCGTACTCGCCACGAGCAGCATCAACGAAAGTGGGCAGAGCAAGAGAGGCCAAGT 116287 Query 213502 TGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGC 213561 |||||||||| ||||| | | | | |||||||| |||||||| ||||| ||||| || Sbjct 116286 TGCAAACGGCGACCTCATCGGGGGCAGTGTACTCGATGATCTCAGTGCAGAGGTTAGAGC 116227 Query 213562 ATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCA 213621 ||||| || |||||||||| ||||| ||| |||| | ||||||||| |||| Sbjct 116226 TGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCACGCATCCTTGTACAGCA 116167 Query 213622 TGTAGGGGGACCCGGTCTCTAGCTGGG 213648 || ||||| |||||||| ||||| Sbjct 116166 TGAAGGGGTTACCGGTCTCGGTCTGGG 116140 Score = 98.7 bits (108), Expect = 2e-15 Identities = 253/380 (67%), Gaps = 9/380 (2%) Strand=Plus/Minus Query 213789 AGGCTCCAGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGC 213847 ||| ||||||| |||| | ||| || | || |||||| || || || ||| || || Sbjct 115947 AGGGTCCAGTCACCGTTAGACTCA-ACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGC 115889 Query 213848 GGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAA 213907 ||| ||||| | | || ||| ||| || ||| ||||| || || | || Sbjct 115888 ATAGAAGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAA 115829 Query 213908 GTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG-- 213965 ||||||||||| | |||||| ||||||| |||||| || || || || || | |||| Sbjct 115828 CTCAAAGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTT 115769 Query 213966 -CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCC 214024 ||||||||||| || || || ||||||| | || || | || || ||||| Sbjct 115768 CCCGCCCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCC 115709 Query 214025 GTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCTCATG 214082 |||||| |||||| || || | || || || || | || | | | || | | Sbjct 115708 GTTGGAAGTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGATACGGTGGACGTT 115649 Query 214083 GAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142 |||| || || ||||| || ||||||||||||||| || | ||| || || | Sbjct 115648 GAGA--CCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCATAG 115591 Query 214143 ATGCCGGCCATGCTGTCATC 214162 || || | |||||||| || Sbjct 115590 ATACCCTCAATGCTGTCCTC 115571 >seq657 Length=446211 Score = 203 bits (224), Expect = 6e-47 Identities = 358/518 (69%), Gaps = 13/518 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | ||||||||| || Sbjct 211783 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGCGAGATGTTGTC 211842 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| ||||||||| | | ||| || | | ||| ||| | ||||| Sbjct 211843 CATGAAGTCGAAGGGGTTTGTGGCGTTGTAGTACTTCTTGTT--GCCAAGAGAGACCAGC 211900 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 ||| | || || ||| |||||||||| | ||||||| || |||||| || | |||| Sbjct 211901 AGGCGGTCGGCAACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATACCAAGGAGG 211960 Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 | ||||| | || | || || ||||||| ||| || | ||||| || | | ||| Sbjct 211961 GCAACGGGGAGGGCGTCCGTCAGGAACTCCTGCTCAATGTCGACGGCATCAACGATGATC 212020 Query 48077 TGCTTAACGCGGGACTC---TGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 | || || ||| |||||| |||| |||||| || | |||| || Sbjct 212021 TTCTCGACAAC---CTCAGGTGAGGGGCGGTTGTTCAGGTG---GGAGAACAGCAGACAA 212074 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || ||||| |||||| || || || || ||| ||| |||| |||||| |||||| Sbjct 212075 GCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAGAAGGTCAGACCA 212134 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||||| || | || || |||||||| || | ||||||||||||||||||||||| Sbjct 212135 GGCATGAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATA 212194 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || ||||| || | | || |||||| | | |||||| |||| Sbjct 212195 CCCTCAACAGCAGCGAAGGCAACCAAGCGCTGGGCGAAAGTGGACTCCTTGTCCTGGATC 212254 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||| || |||||||| |||||||| |||||| || Sbjct 212255 CAGCGAATGGCCCAGTCGGCCTTCTTGCGGATGCAGGG 212292 Score = 96.9 bits (106), Expect = 6e-15 Identities = 173/251 (69%), Gaps = 5/251 (2%) Strand=Plus/Plus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || ||||||||| ||||||||| | |||||| | Sbjct 212429 TCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCAGGGA 212488 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 |||| || || ||| | ||| | || ||||| ||||| || || || || || | Sbjct 212489 CCTGGACCTCGCCACTGAAACGCTCGACGAGGTTCTCGTTGACGATGCCGTCAGACGCGG 212548 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCA----TTC 48604 | ||||| || |||||||| | ||| | |||||||| | | |||| || ||| Sbjct 212549 CGAAGAAAGCCAGGACATGGGAGATGAAGTAGCGCTCGTCATTGTTGAG-GCGGTTGTTC 212607 Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664 ||| | || | ||| ||| ||| || | || || ||||||||||||| || ||| Sbjct 212608 CAGTCGTGCAGGTCCTTGGACAGATCGATCTCCTCAGCAGTCCAGAAGGAAGCCTCTGCC 212667 Query 48665 TTTTTGTACAT 48675 || |||||||| Sbjct 212668 TTCTTGTACAT 212678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931522983973120