Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq578 156 8e-33
seq657 125 1e-23
>seq578
Length=440600
Score = 156 bits (172), Expect = 8e-33
Identities = 398/597 (67%), Gaps = 18/597 (3%)
Strand=Plus/Minus
Query 222037 CTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTG--CTCC 222094
|| ||||||||| || || |||| || || | ||||| || | || | ||| |||
Sbjct 115918 CTTCATGAAGAGATCGGGAGTCCAGAGGGCATAGAAGAGGTCAC--GTGCTCTGACCTCT 115861
Query 222095 TCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCC 222154
||| |||| ||| || | || ||||| |||||||| ||||| | |||||| ||||||
Sbjct 115860 TCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCC 115801
Query 222155 AGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGA 222214
|| |||| || | ||| || || |||||||| || ||||| || || || | |||
Sbjct 115800 AGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGCCCTGGTCAACGTATCT-TGCAGT 115742
Query 222215 GC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAAT 222273
| |||||| | ||||| | || || || |||||||| ||||| || || ||
Sbjct 115741 GTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGGAAGTTCCGTTAGTACCACCGAT 115682
Query 222274 GTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATG----CCGATACCACCGGCGTGTT 222329
||| | ||| || | || ||| || ||| | || |||||||| || |
Sbjct 115681 GTAAGAACCTGTAGCAC---GGATAC-GGTGGACGTTGAGACCAATACCACCCGCAGTCT 115626
Query 222330 TCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGA 222389
| ||||||||||| || |||| | ||||| ||| ||||| || ||||||||| |
Sbjct 115625 TGGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACCCTCAATGCTGTCCTCCTTCA 115566
Query 222390 CGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGG 222449
| | || || || || | || ||| | | | | || |||||| ||||| || |
Sbjct 115565 TATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGTACCGGCGTTGAACAGAGTCG 115506
Query 222450 GACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGA 222509
| |||||| || ||||| | |||||||||| ||| ||||| | || | |||
Sbjct 115505 GCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTAGGTCTCGATAACCTTCTCGA 115446
Query 222510 TGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACAG 222569
|| || ||||| || | || | ||| ||||| ||| || | ||| ||
Sbjct 115445 GGTCATCACCGTGGATTCCGACCGCAACACGCATAATCATGTGCTGAGGACGCTCAGCA- 115387
Query 222570 GACCCTTGGA--GCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTA 222624
||| || | | || |||||| |||||| ||||||||||||||| || |||||
Sbjct 115386 -ACCTTTCCATTGATGCGGAGCAGATACGATCGTTCCAGAGTCTTGAATCCGAAGTA 115331
Score = 91.5 bits (100), Expect = 3e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| || || ||||| ||||||| || || | | ||| | ||| |||||| | ||
Sbjct 116870 GTTAACGACCTGGAACTCTCCCGCAAGGACACGACGAGAGTAGATGTTCGAAGTGTATGG 116811
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
||||| || |||||| ||||||||||||| || ||||| ||||||||||| || ||
Sbjct 116810 TTCGAAGCATTCGTTGAAGCCCAGGATCTGACTGGTACTGGCCGTGGGCATGGGAGCAAC 116751
Query 221236 CAGCAGACTGTTGCG 221250
|||| ||||||||
Sbjct 116750 GAGCAAGCTGTTGCG 116736
>seq657
Length=446211
Score = 125 bits (138), Expect = 1e-23
Identities = 292/447 (65%), Gaps = 7/447 (2%)
Strand=Plus/Minus
Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936
|||| |||| ||||| |||||||| ||||| ||||| ||| || || || || | |
Sbjct 212225 AGCGCTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTA 212166
Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996
|||||||||| ||| || || |||||| || ||| ||| || |||||||| |||
Sbjct 212165 TCTTCTGGCTGAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCTAACGAGCTGATCT 212106
Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056
| || |||||||| |||| || || || || ||||| | | | |||| || |
Sbjct 212105 CTCGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTC---CCACCTGAACA 212049
Query 26057 ACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGG 26116
|| || || | ||| ||| | | |||||| || || || || || ||| |||
Sbjct 212048 ACCGCCCCTCACCTGAGGTTGTCGAGAAGATCATCGTTGATGCCGTCGACATTGAGCAGG 211989
Query 26117 AGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCC 26176
|||| | | || |||||| || |||||| |||
Sbjct 211988 AGTTCCTGACGGACGCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCAAGCTCATGTGCC 211929
Query 26177 AATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACA 26236
| ||||| |||| || ||||||| |||||| | || || | | |||||
Sbjct 211928 AGTACATCGAGTTCGTTGCCGACCGCCTGCTGGTCTCTCTTGGCAACAAGAAGTACTACA 211869
Query 26237 GTACGC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTT 26294
|||| | ||||| |||||||| ||||| ||||| ||| | | || |||||||||||
Sbjct 211868 --ACGCCACAAACCCCTTCGACTTCATGGACAACATCTCGCTCGCTGGCAAGACCAACTT 211811
Query 26295 CTTTGAAAAGAGGGTCGGCGACTATCA 26321
||| || ||| | ||||| ||||| ||
Sbjct 211810 CTTCGAGAAGCGTGTCGGTGACTACCA 211784
Score = 98.7 bits (108), Expect = 2e-15
Identities = 171/246 (70%), Gaps = 7/246 (3%)
Strand=Plus/Minus
Query 25465 ACACACAAAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAA 25524
||||||| |||| | || |||||||||||||||| | || |||||| || ||
Sbjct 212697 ACACACACAGATCT--GGCAGATGTACAAGAAGGCAGAGGCTTCCTTCTGGACTGCTGAG 212640
Query 25525 GAGATTGATCTGGCCAAGGACATGGACGGCTGGTA----CGCTCTATCCAAAGACGAGCA 25580
||||| |||||| |||||||| || ||| |||| | ||| || ||| |||||||
Sbjct 212639 GAGATCGATCTGTCCAAGGACCTGCACGACTGGAACAACCGC-CTCAACAATGACGAGCG 212581
Query 25581 GCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAA 25640
| || || | || |||| ||||| || || ||||| || || || ||||||||
Sbjct 212580 CTACTTCATCTCCCATGTCCTGGCTTTCTTCGCCGCGTCTGACGGCATCGTCAACGAGAA 212521
Query 25641 TCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTT 25700
|| |||| | |||| | || || ||| | ||||| || |||||||||||
Sbjct 212520 CCTCGTCGAGCGTTTCAGTGGCGAGGTCCAGGTCCCTGAGGCTCGTTGCTTCTACGGTTT 212461
Query 25701 CCAGAT 25706
||||||
Sbjct 212460 CCAGAT 212455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928835012297920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |