Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq578 156 8e-33 seq657 125 1e-23 >seq578 Length=440600 Score = 156 bits (172), Expect = 8e-33 Identities = 398/597 (67%), Gaps = 18/597 (3%) Strand=Plus/Minus Query 222037 CTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTG--CTCC 222094 || ||||||||| || || |||| || || | ||||| || | || | ||| ||| Sbjct 115918 CTTCATGAAGAGATCGGGAGTCCAGAGGGCATAGAAGAGGTCAC--GTGCTCTGACCTCT 115861 Query 222095 TCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCC 222154 ||| |||| ||| || | || ||||| |||||||| ||||| | |||||| |||||| Sbjct 115860 TCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCC 115801 Query 222155 AGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGA 222214 || |||| || | ||| || || |||||||| || ||||| || || || | ||| Sbjct 115800 AGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGCCCTGGTCAACGTATCT-TGCAGT 115742 Query 222215 GC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAAT 222273 | |||||| | ||||| | || || || |||||||| ||||| || || || Sbjct 115741 GTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGGAAGTTCCGTTAGTACCACCGAT 115682 Query 222274 GTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATG----CCGATACCACCGGCGTGTT 222329 ||| | ||| || | || ||| || ||| | || |||||||| || | Sbjct 115681 GTAAGAACCTGTAGCAC---GGATAC-GGTGGACGTTGAGACCAATACCACCCGCAGTCT 115626 Query 222330 TCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGA 222389 | ||||||||||| || |||| | ||||| ||| ||||| || ||||||||| | Sbjct 115625 TGGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACCCTCAATGCTGTCCTCCTTCA 115566 Query 222390 CGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGG 222449 | | || || || || | || ||| | | | | || |||||| ||||| || | Sbjct 115565 TATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGTACCGGCGTTGAACAGAGTCG 115506 Query 222450 GACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGA 222509 | |||||| || ||||| | |||||||||| ||| ||||| | || | ||| Sbjct 115505 GCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTAGGTCTCGATAACCTTCTCGA 115446 Query 222510 TGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACAG 222569 || || ||||| || | || | ||| ||||| ||| || | ||| || Sbjct 115445 GGTCATCACCGTGGATTCCGACCGCAACACGCATAATCATGTGCTGAGGACGCTCAGCA- 115387 Query 222570 GACCCTTGGA--GCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTA 222624 ||| || | | || |||||| |||||| ||||||||||||||| || ||||| Sbjct 115386 -ACCTTTCCATTGATGCGGAGCAGATACGATCGTTCCAGAGTCTTGAATCCGAAGTA 115331 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| ||||||| || || | | ||| | ||| |||||| | || Sbjct 116870 GTTAACGACCTGGAACTCTCCCGCAAGGACACGACGAGAGTAGATGTTCGAAGTGTATGG 116811 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 ||||| || |||||| ||||||||||||| || ||||| ||||||||||| || || Sbjct 116810 TTCGAAGCATTCGTTGAAGCCCAGGATCTGACTGGTACTGGCCGTGGGCATGGGAGCAAC 116751 Query 221236 CAGCAGACTGTTGCG 221250 |||| |||||||| Sbjct 116750 GAGCAAGCTGTTGCG 116736 >seq657 Length=446211 Score = 125 bits (138), Expect = 1e-23 Identities = 292/447 (65%), Gaps = 7/447 (2%) Strand=Plus/Minus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| |||| ||||| |||||||| ||||| ||||| ||| || || || || | | Sbjct 212225 AGCGCTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTA 212166 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996 |||||||||| ||| || || |||||| || ||| ||| || |||||||| ||| Sbjct 212165 TCTTCTGGCTGAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCTAACGAGCTGATCT 212106 Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056 | || |||||||| |||| || || || || ||||| | | | |||| || | Sbjct 212105 CTCGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTC---CCACCTGAACA 212049 Query 26057 ACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGG 26116 || || || | ||| ||| | | |||||| || || || || || ||| ||| Sbjct 212048 ACCGCCCCTCACCTGAGGTTGTCGAGAAGATCATCGTTGATGCCGTCGACATTGAGCAGG 211989 Query 26117 AGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCC 26176 |||| | | || |||||| || |||||| ||| Sbjct 211988 AGTTCCTGACGGACGCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCAAGCTCATGTGCC 211929 Query 26177 AATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACA 26236 | ||||| |||| || ||||||| |||||| | || || | | ||||| Sbjct 211928 AGTACATCGAGTTCGTTGCCGACCGCCTGCTGGTCTCTCTTGGCAACAAGAAGTACTACA 211869 Query 26237 GTACGC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTT 26294 |||| | ||||| |||||||| ||||| ||||| ||| | | || ||||||||||| Sbjct 211868 --ACGCCACAAACCCCTTCGACTTCATGGACAACATCTCGCTCGCTGGCAAGACCAACTT 211811 Query 26295 CTTTGAAAAGAGGGTCGGCGACTATCA 26321 ||| || ||| | ||||| ||||| || Sbjct 211810 CTTCGAGAAGCGTGTCGGTGACTACCA 211784 Score = 98.7 bits (108), Expect = 2e-15 Identities = 171/246 (70%), Gaps = 7/246 (3%) Strand=Plus/Minus Query 25465 ACACACAAAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAA 25524 ||||||| |||| | || |||||||||||||||| | || |||||| || || Sbjct 212697 ACACACACAGATCT--GGCAGATGTACAAGAAGGCAGAGGCTTCCTTCTGGACTGCTGAG 212640 Query 25525 GAGATTGATCTGGCCAAGGACATGGACGGCTGGTA----CGCTCTATCCAAAGACGAGCA 25580 ||||| |||||| |||||||| || ||| |||| | ||| || ||| ||||||| Sbjct 212639 GAGATCGATCTGTCCAAGGACCTGCACGACTGGAACAACCGC-CTCAACAATGACGAGCG 212581 Query 25581 GCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAA 25640 | || || | || |||| ||||| || || ||||| || || || |||||||| Sbjct 212580 CTACTTCATCTCCCATGTCCTGGCTTTCTTCGCCGCGTCTGACGGCATCGTCAACGAGAA 212521 Query 25641 TCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTT 25700 || |||| | |||| | || || ||| | ||||| || ||||||||||| Sbjct 212520 CCTCGTCGAGCGTTTCAGTGGCGAGGTCCAGGTCCCTGAGGCTCGTTGCTTCTACGGTTT 212461 Query 25701 CCAGAT 25706 |||||| Sbjct 212460 CCAGAT 212455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928835012297920