Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq205 235 4e-56
seq609 111 1e-18
seq294 100 2e-15
seq314 98.7 6e-15
seq245 98.7 6e-15
seq244 98.7 6e-15
seq157 98.7 6e-15
>seq205
Length=39400
Score = 235 bits (260), Expect = 4e-56
Identities = 535/795 (67%), Gaps = 10/795 (1%)
Strand=Plus/Minus
Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546
|||||| | ||||||||||||||||||||||| | | ||||||||| ||||||| ||
Sbjct 4268 CGTCTTCGTACTGCTTGTGAACGTGCTAAGCGTACCTTGTCTTCTGCTGCTCAAACCACC 4209
Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGA-TTATAATACTCTTATTACAAGGGCTAA 475605
| ||| | || ||||| || ||||| |||| || || ||||| | || | |||
Sbjct 4208 ATCGAAATCGACTCTCTCTTCGAAGGTGTTGACTTCTACACCTCTT-TGACTCGTGCTCG 4150
Query 475606 ATTTGAAGATATTTGTTCT-GATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTC 475664
|| ||||| ||| | |||||||| | || || || ||||| || ||| | || |
Sbjct 4149 TTTCGAAGA-ATTGAACCAAGATCTCTTCCGTAATACCATGGAACCTGTCGAAAAGGTCC 4091
Query 475665 TCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAA 475724
| | || || || ||||||| || ||||| || || ||||| || || || ||||| |
Sbjct 4090 TTCGTGACTCCAAGATTGACAAGTCTCAAGTTCACGATATTGTCCTCGTCGGTGGTTCCA 4031
Query 475725 CAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG 475784
| | ||||| || | | | || |||| | || || ||||| | ||
Sbjct 4030 CCCGTATTCCCAAGGTTCAAAAGTTGGTTTCTGACTTCTTCAACGGTAAGGAACCCAAC- 3972
Query 475785 AAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTT 475842
|||| | || ||||||||||||||||| ||||| |||||||||||||| || ||| |
Sbjct 3971 -AAGTCCATCAACCCTGATGAAGCTGTTGCCTATGGTGCTGCTGTCCAAGCTGCCATTCT 3913
Query 475843 ATCAGGTCAATCAGACGAGAA-ACTAAATAATATTGTACTTGTTGACGTAACTCCACTTT 475901
|| ||| | | ||| || || || | || | ||| | ||||| |||| ||||
Sbjct 3912 CTCTGGTGACACTTCCGAAAAGACCCAAGACC-TTCTTCTTTTGGACGTTGCTCCTCTTT 3854
Query 475902 CATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTA 475961
| | ||| ||||||| | ||| || | |||||| |||||| | | || || ||
Sbjct 3853 CCCTCGGTATTGAAACCGCTGGTGGTGTCATGACTGCTCTTATCAAGCGTAACACCACTG 3794
Query 475962 TCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCA 476021
| || ||| || || || | || || || || | ||||| ||| | ||| ||
Sbjct 3793 TTCCCACCAAGAAGTCCGAAATCTTCTCTACCTACGCCGATAACCAACCTGGTGTCCTCA 3734
Query 476022 TCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTA 476081
||||| | | ||||||||| | || || ||||| ||| || || | ||
Sbjct 3733 TCCAAGTTTACGAAGGTGAACGTGCTCGTACCAAGGATAACAACCTTCTCGGTAAGTTCG 3674
Query 476082 ATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATA 476141
| ||| |||||||||||||| || | || ||||||||||| ||||||||||| |||
Sbjct 3673 AACTTACTGGTATTCCTCCTGCCCCTCGTGGTGTTCCTCAAATCGAAGTTACTTTCGATG 3614
Query 476142 TTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAGAGTAAAA 476201
||||||| || ||||| | || || ||||| ||| || ||| | ||| ||| |
Sbjct 3613 TTGATGCCAACGGTATCTTGAACGTCTCTGCTCTTGACAAGACTACTGGTAAGTCTAACA 3554
Query 476202 ATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGTTG 476261
| || || || || ||| | ||| | | | | ||| | || ||||||||||
Sbjct 3553 AGATCACCATCACCAACGACAAGGGTCGTCTCTCCAAGGAAGATATCGAACGTATGGTCA 3494
Query 476262 ATGAAGCCAAAGAGT 476276
| ||||| || |||
Sbjct 3493 ACGAAGCTGAAAAGT 3479
Score = 113 bits (124), Expect = 3e-19
Identities = 239/350 (68%), Gaps = 10/350 (3%)
Strand=Plus/Minus
Query 474361 TTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAG 474420
|||||| | |||||||||||| | | || ||||| |||||||| || || ||||| |
Sbjct 5061 TTGTGTTGGTGTTTGGCAAAACGATCGTGTTGAAATCATTGCCAACGATCAGGGTAACCG 5002
Query 474421 AACAACACCATCATATGTTTCTTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAA 474480
|| || || || |||||| ||| || || ||||||| ||| ||||| || ||||| ||
Sbjct 5001 TACCACCCCCTCTTATGTTGGTTTCACCGACACTGAACGTCTCATTGGTGACGCTGCCAA 4942
Query 474481 ATATCAAGCTGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCG 474540
| |||| || || ||| ||||| | ||||| || || | ||||| |||||
Sbjct 4941 GAACCAAGTCGCCATGAACCCTTACAATACCGTCTTTGACGCCAAGCGTTTGATCGGTCG 4882
Query 474541 TAATTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAA 474600
| || | || || || |||||||| ||| || ||||| || ||||| || |
Sbjct 4881 TCGCTTCAACGAACCCGAAGTTCAATCTGACATGAAGCACTGGCCCTTCAAGGTCATTGA 4822
Query 474601 TGTTGGTGGTAAACCATAT-ATAGAAG--CAATACACGCAGGTGAAACTAAACAATTTTC 474657
| | || || || ||| || ||| |||||| | ||||| || || | ||||
Sbjct 4821 TAAGGAAGGCAAGCC-TATCATCCAAGTTGAATACAAG--GGTGAGACCAA--GACTTTC 4767
Query 474658 A--CCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC 474705
| || ||| |||| ||||| ||||| | ||| ||||| |||| ||
Sbjct 4766 ACTCCCGAAGAAATCTCTTCTATGGTCCTTATCAAGATGAAGGAAACTGC 4717
>seq609
Length=32548
Score = 111 bits (122), Expect = 1e-18
Identities = 123/164 (75%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||||||||| || | ||||| ||| ||| || || || |||||| | ||
Sbjct 21014 ACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGT 20955
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||||| ||||| || || || ||||| |||||||||||||||||||| || ||
Sbjct 20954 ACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACC 20895
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG 480714
|||||| ||||| |||||||| |||||| ||||| || ||||
Sbjct 20894 TTCCTTATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCAG 20851
>seq294
Length=30982
Score = 100 bits (110), Expect = 2e-15
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || || ||||| || || || || || ||| ||||||||||||| || || ||||
Sbjct 26424 ATGCTGTCATCACTGTCCCTGCCTACTTCAACGATGCTCAACGTCAAGCTACCAAGGATG 26365
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| || | ||||| |||||| |||| || ||| | || || ||||| || || || ||
Sbjct 26364 CTGGTAAGATTGCCGGTCTTGATGTCTTGCGTGTCATCAACGAACCTACTGCCGCTGCCT 26305
Query 474855 TTGCTTATGGTCTTGATAAG 474874
| ||||| |||||||| |||
Sbjct 26304 TGGCTTACGGTCTTGACAAG 26285
>seq314
Length=23708
Score = 98.7 bits (108), Expect = 6e-15
Identities = 168/241 (70%), Gaps = 2/241 (1%)
Strand=Plus/Plus
Query 698736 GCTTGTTTGTATGCTGGAATAAAAATATCAGGAACAAATGTTGAGGTTGCGCCAGGTCAA 698795
||||| |||||||| || | || || ||||| |||| ||| || || |||||||||
Sbjct 18811 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 18870
Query 698796 CACGAATTTCAAATTGGACCAGTTGAAGGTATTGATGTTGCAGATCAATTATGGATTGCA 698855
||||||||| | || ||| ||||||||||| | | | |||||| | |||||| |
Sbjct 18871 TTTGAATTTCAAGTAGGTCCATGTGAAGGTATTGGTATGGGAGATCATCTTTGGATTTCT 18930
Query 698856 AGATATATTTTGGAAAAATTATCAGAAAATCATGGGAAATATATTGTTTA-TGATCCAAA 698914
| ||||| |||||| | |||||| | | | || | || | | || | |||| ||
Sbjct 18931 CGTTATATCTTGGAACGTGTTTCAGAAGA-CTTTGGTATCATTGTCTCTATTCATCCTAA 18989
Query 698915 ACCTCTTAAAGGAGATTGGAATGGATCAGGATGTCATACTAATTTCAGTACAGAATCAAT 698974
||| | || || |||||||| || | || ||||| || || || ||| ||| |||
Sbjct 18990 GCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAGAAAT 19049
Query 698975 G 698975
|
Sbjct 19050 G 19050
>seq245
Length=22460
Score = 98.7 bits (108), Expect = 6e-15
Identities = 168/241 (70%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 698736 GCTTGTTTGTATGCTGGAATAAAAATATCAGGAACAAATGTTGAGGTTGCGCCAGGTCAA 698795
||||| |||||||| || | || || ||||| |||| ||| || || |||||||||
Sbjct 3650 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 3591
Query 698796 CACGAATTTCAAATTGGACCAGTTGAAGGTATTGATGTTGCAGATCAATTATGGATTGCA 698855
||||||||| | || ||| ||||||||||| | | | |||||| | |||||| |
Sbjct 3590 TTTGAATTTCAAGTAGGTCCATGTGAAGGTATTGGTATGGGAGATCATCTTTGGATTTCT 3531
Query 698856 AGATATATTTTGGAAAAATTATCAGAAAATCATGGGAAATATATTGTTTA-TGATCCAAA 698914
| ||||| |||||| | |||||| | | | || | || | | || | |||| ||
Sbjct 3530 CGTTATATCTTGGAACGTGTTTCAGAAGA-CTTTGGTATCATTGTCTCTATTCATCCTAA 3472
Query 698915 ACCTCTTAAAGGAGATTGGAATGGATCAGGATGTCATACTAATTTCAGTACAGAATCAAT 698974
||| | || || |||||||| || | || ||||| || || || ||| ||| |||
Sbjct 3471 GCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAGAAAT 3412
Query 698975 G 698975
|
Sbjct 3411 G 3411
>seq244
Length=22460
Score = 98.7 bits (108), Expect = 6e-15
Identities = 168/241 (70%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 698736 GCTTGTTTGTATGCTGGAATAAAAATATCAGGAACAAATGTTGAGGTTGCGCCAGGTCAA 698795
||||| |||||||| || | || || ||||| |||| ||| || || |||||||||
Sbjct 3650 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 3591
Query 698796 CACGAATTTCAAATTGGACCAGTTGAAGGTATTGATGTTGCAGATCAATTATGGATTGCA 698855
||||||||| | || ||| ||||||||||| | | | |||||| | |||||| |
Sbjct 3590 TTTGAATTTCAAGTAGGTCCATGTGAAGGTATTGGTATGGGAGATCATCTTTGGATTTCT 3531
Query 698856 AGATATATTTTGGAAAAATTATCAGAAAATCATGGGAAATATATTGTTTA-TGATCCAAA 698914
| ||||| |||||| | |||||| | | | || | || | | || | |||| ||
Sbjct 3530 CGTTATATCTTGGAACGTGTTTCAGAAGA-CTTTGGTATCATTGTCTCTATTCATCCTAA 3472
Query 698915 ACCTCTTAAAGGAGATTGGAATGGATCAGGATGTCATACTAATTTCAGTACAGAATCAAT 698974
||| | || || |||||||| || | || ||||| || || || ||| ||| |||
Sbjct 3471 GCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAGAAAT 3412
Query 698975 G 698975
|
Sbjct 3411 G 3411
>seq157
Length=40733
Score = 98.7 bits (108), Expect = 6e-15
Identities = 168/241 (70%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 698736 GCTTGTTTGTATGCTGGAATAAAAATATCAGGAACAAATGTTGAGGTTGCGCCAGGTCAA 698795
||||| |||||||| || | || || ||||| |||| ||| || || |||||||||
Sbjct 21923 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 21864
Query 698796 CACGAATTTCAAATTGGACCAGTTGAAGGTATTGATGTTGCAGATCAATTATGGATTGCA 698855
||||||||| | || ||| ||||||||||| | | | |||||| | |||||| |
Sbjct 21863 TTTGAATTTCAAGTAGGTCCATGTGAAGGTATTGGTATGGGAGATCATCTTTGGATTTCT 21804
Query 698856 AGATATATTTTGGAAAAATTATCAGAAAATCATGGGAAATATATTGTTTA-TGATCCAAA 698914
| ||||| |||||| | |||||| | | | || | || | | || | |||| ||
Sbjct 21803 CGTTATATCTTGGAACGTGTTTCAGAAGA-CTTTGGTATCATTGTCTCTATTCATCCTAA 21745
Query 698915 ACCTCTTAAAGGAGATTGGAATGGATCAGGATGTCATACTAATTTCAGTACAGAATCAAT 698974
||| | || || |||||||| || | || ||||| || || || ||| ||| |||
Sbjct 21744 GCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAGAAAT 21685
Query 698975 G 698975
|
Sbjct 21684 G 21684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268143039639764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |