Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq205 235 4e-56 seq609 111 1e-18 seq294 100 2e-15 seq314 98.7 6e-15 seq245 98.7 6e-15 seq244 98.7 6e-15 seq157 98.7 6e-15 >seq205 Length=39400 Score = 235 bits (260), Expect = 4e-56 Identities = 535/795 (67%), Gaps = 10/795 (1%) Strand=Plus/Minus Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 |||||| | ||||||||||||||||||||||| | | ||||||||| ||||||| || Sbjct 4268 CGTCTTCGTACTGCTTGTGAACGTGCTAAGCGTACCTTGTCTTCTGCTGCTCAAACCACC 4209 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGA-TTATAATACTCTTATTACAAGGGCTAA 475605 | ||| | || ||||| || ||||| |||| || || ||||| | || | ||| Sbjct 4208 ATCGAAATCGACTCTCTCTTCGAAGGTGTTGACTTCTACACCTCTT-TGACTCGTGCTCG 4150 Query 475606 ATTTGAAGATATTTGTTCT-GATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTC 475664 || ||||| ||| | |||||||| | || || || ||||| || ||| | || | Sbjct 4149 TTTCGAAGA-ATTGAACCAAGATCTCTTCCGTAATACCATGGAACCTGTCGAAAAGGTCC 4091 Query 475665 TCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAA 475724 | | || || || ||||||| || ||||| || || ||||| || || || ||||| | Sbjct 4090 TTCGTGACTCCAAGATTGACAAGTCTCAAGTTCACGATATTGTCCTCGTCGGTGGTTCCA 4031 Query 475725 CAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG 475784 | | ||||| || | | | || |||| | || || ||||| | || Sbjct 4030 CCCGTATTCCCAAGGTTCAAAAGTTGGTTTCTGACTTCTTCAACGGTAAGGAACCCAAC- 3972 Query 475785 AAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTT 475842 |||| | || ||||||||||||||||| ||||| |||||||||||||| || ||| | Sbjct 3971 -AAGTCCATCAACCCTGATGAAGCTGTTGCCTATGGTGCTGCTGTCCAAGCTGCCATTCT 3913 Query 475843 ATCAGGTCAATCAGACGAGAA-ACTAAATAATATTGTACTTGTTGACGTAACTCCACTTT 475901 || ||| | | ||| || || || | || | ||| | ||||| |||| |||| Sbjct 3912 CTCTGGTGACACTTCCGAAAAGACCCAAGACC-TTCTTCTTTTGGACGTTGCTCCTCTTT 3854 Query 475902 CATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTA 475961 | | ||| ||||||| | ||| || | |||||| |||||| | | || || || Sbjct 3853 CCCTCGGTATTGAAACCGCTGGTGGTGTCATGACTGCTCTTATCAAGCGTAACACCACTG 3794 Query 475962 TCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCA 476021 | || ||| || || || | || || || || | ||||| ||| | ||| || Sbjct 3793 TTCCCACCAAGAAGTCCGAAATCTTCTCTACCTACGCCGATAACCAACCTGGTGTCCTCA 3734 Query 476022 TCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTA 476081 ||||| | | ||||||||| | || || ||||| ||| || || | || Sbjct 3733 TCCAAGTTTACGAAGGTGAACGTGCTCGTACCAAGGATAACAACCTTCTCGGTAAGTTCG 3674 Query 476082 ATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATA 476141 | ||| |||||||||||||| || | || ||||||||||| ||||||||||| ||| Sbjct 3673 AACTTACTGGTATTCCTCCTGCCCCTCGTGGTGTTCCTCAAATCGAAGTTACTTTCGATG 3614 Query 476142 TTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAGAGTAAAA 476201 ||||||| || ||||| | || || ||||| ||| || ||| | ||| ||| | Sbjct 3613 TTGATGCCAACGGTATCTTGAACGTCTCTGCTCTTGACAAGACTACTGGTAAGTCTAACA 3554 Query 476202 ATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGTTG 476261 | || || || || ||| | ||| | | | | ||| | || |||||||||| Sbjct 3553 AGATCACCATCACCAACGACAAGGGTCGTCTCTCCAAGGAAGATATCGAACGTATGGTCA 3494 Query 476262 ATGAAGCCAAAGAGT 476276 | ||||| || ||| Sbjct 3493 ACGAAGCTGAAAAGT 3479 Score = 113 bits (124), Expect = 3e-19 Identities = 239/350 (68%), Gaps = 10/350 (3%) Strand=Plus/Minus Query 474361 TTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAG 474420 |||||| | |||||||||||| | | || ||||| |||||||| || || ||||| | Sbjct 5061 TTGTGTTGGTGTTTGGCAAAACGATCGTGTTGAAATCATTGCCAACGATCAGGGTAACCG 5002 Query 474421 AACAACACCATCATATGTTTCTTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAA 474480 || || || || |||||| ||| || || ||||||| ||| ||||| || ||||| || Sbjct 5001 TACCACCCCCTCTTATGTTGGTTTCACCGACACTGAACGTCTCATTGGTGACGCTGCCAA 4942 Query 474481 ATATCAAGCTGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCG 474540 | |||| || || ||| ||||| | ||||| || || | ||||| ||||| Sbjct 4941 GAACCAAGTCGCCATGAACCCTTACAATACCGTCTTTGACGCCAAGCGTTTGATCGGTCG 4882 Query 474541 TAATTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAA 474600 | || | || || || |||||||| ||| || ||||| || ||||| || | Sbjct 4881 TCGCTTCAACGAACCCGAAGTTCAATCTGACATGAAGCACTGGCCCTTCAAGGTCATTGA 4822 Query 474601 TGTTGGTGGTAAACCATAT-ATAGAAG--CAATACACGCAGGTGAAACTAAACAATTTTC 474657 | | || || || ||| || ||| |||||| | ||||| || || | |||| Sbjct 4821 TAAGGAAGGCAAGCC-TATCATCCAAGTTGAATACAAG--GGTGAGACCAA--GACTTTC 4767 Query 474658 A--CCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC 474705 | || ||| |||| ||||| ||||| | ||| ||||| |||| || Sbjct 4766 ACTCCCGAAGAAATCTCTTCTATGGTCCTTATCAAGATGAAGGAAACTGC 4717 >seq609 Length=32548 Score = 111 bits (122), Expect = 1e-18 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | ||||| ||| ||| || || || |||||| | || Sbjct 21014 ACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGT 20955 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||||| ||||| || || || ||||| |||||||||||||||||||| || || Sbjct 20954 ACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACC 20895 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG 480714 |||||| ||||| |||||||| |||||| ||||| || |||| Sbjct 20894 TTCCTTATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCAG 20851 >seq294 Length=30982 Score = 100 bits (110), Expect = 2e-15 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || || ||||| || || || || || ||| ||||||||||||| || || |||| Sbjct 26424 ATGCTGTCATCACTGTCCCTGCCTACTTCAACGATGCTCAACGTCAAGCTACCAAGGATG 26365 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || | ||||| |||||| |||| || ||| | || || ||||| || || || || Sbjct 26364 CTGGTAAGATTGCCGGTCTTGATGTCTTGCGTGTCATCAACGAACCTACTGCCGCTGCCT 26305 Query 474855 TTGCTTATGGTCTTGATAAG 474874 | ||||| |||||||| ||| Sbjct 26304 TGGCTTACGGTCTTGACAAG 26285 >seq314 Length=23708 Score = 98.7 bits (108), Expect = 6e-15 Identities = 168/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 698736 GCTTGTTTGTATGCTGGAATAAAAATATCAGGAACAAATGTTGAGGTTGCGCCAGGTCAA 698795 ||||| |||||||| || | || || ||||| |||| ||| || || ||||||||| Sbjct 18811 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 18870 Query 698796 CACGAATTTCAAATTGGACCAGTTGAAGGTATTGATGTTGCAGATCAATTATGGATTGCA 698855 ||||||||| | || ||| ||||||||||| | | | |||||| | |||||| | Sbjct 18871 TTTGAATTTCAAGTAGGTCCATGTGAAGGTATTGGTATGGGAGATCATCTTTGGATTTCT 18930 Query 698856 AGATATATTTTGGAAAAATTATCAGAAAATCATGGGAAATATATTGTTTA-TGATCCAAA 698914 | ||||| |||||| | |||||| | | | || | || | | || | |||| || Sbjct 18931 CGTTATATCTTGGAACGTGTTTCAGAAGA-CTTTGGTATCATTGTCTCTATTCATCCTAA 18989 Query 698915 ACCTCTTAAAGGAGATTGGAATGGATCAGGATGTCATACTAATTTCAGTACAGAATCAAT 698974 ||| | || || |||||||| || | || ||||| || || || ||| ||| ||| Sbjct 18990 GCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAGAAAT 19049 Query 698975 G 698975 | Sbjct 19050 G 19050 >seq245 Length=22460 Score = 98.7 bits (108), Expect = 6e-15 Identities = 168/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 698736 GCTTGTTTGTATGCTGGAATAAAAATATCAGGAACAAATGTTGAGGTTGCGCCAGGTCAA 698795 ||||| |||||||| || | || || ||||| |||| ||| || || ||||||||| Sbjct 3650 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 3591 Query 698796 CACGAATTTCAAATTGGACCAGTTGAAGGTATTGATGTTGCAGATCAATTATGGATTGCA 698855 ||||||||| | || ||| ||||||||||| | | | |||||| | |||||| | Sbjct 3590 TTTGAATTTCAAGTAGGTCCATGTGAAGGTATTGGTATGGGAGATCATCTTTGGATTTCT 3531 Query 698856 AGATATATTTTGGAAAAATTATCAGAAAATCATGGGAAATATATTGTTTA-TGATCCAAA 698914 | ||||| |||||| | |||||| | | | || | || | | || | |||| || Sbjct 3530 CGTTATATCTTGGAACGTGTTTCAGAAGA-CTTTGGTATCATTGTCTCTATTCATCCTAA 3472 Query 698915 ACCTCTTAAAGGAGATTGGAATGGATCAGGATGTCATACTAATTTCAGTACAGAATCAAT 698974 ||| | || || |||||||| || | || ||||| || || || ||| ||| ||| Sbjct 3471 GCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAGAAAT 3412 Query 698975 G 698975 | Sbjct 3411 G 3411 >seq244 Length=22460 Score = 98.7 bits (108), Expect = 6e-15 Identities = 168/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 698736 GCTTGTTTGTATGCTGGAATAAAAATATCAGGAACAAATGTTGAGGTTGCGCCAGGTCAA 698795 ||||| |||||||| || | || || ||||| |||| ||| || || ||||||||| Sbjct 3650 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 3591 Query 698796 CACGAATTTCAAATTGGACCAGTTGAAGGTATTGATGTTGCAGATCAATTATGGATTGCA 698855 ||||||||| | || ||| ||||||||||| | | | |||||| | |||||| | Sbjct 3590 TTTGAATTTCAAGTAGGTCCATGTGAAGGTATTGGTATGGGAGATCATCTTTGGATTTCT 3531 Query 698856 AGATATATTTTGGAAAAATTATCAGAAAATCATGGGAAATATATTGTTTA-TGATCCAAA 698914 | ||||| |||||| | |||||| | | | || | || | | || | |||| || Sbjct 3530 CGTTATATCTTGGAACGTGTTTCAGAAGA-CTTTGGTATCATTGTCTCTATTCATCCTAA 3472 Query 698915 ACCTCTTAAAGGAGATTGGAATGGATCAGGATGTCATACTAATTTCAGTACAGAATCAAT 698974 ||| | || || |||||||| || | || ||||| || || || ||| ||| ||| Sbjct 3471 GCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAGAAAT 3412 Query 698975 G 698975 | Sbjct 3411 G 3411 >seq157 Length=40733 Score = 98.7 bits (108), Expect = 6e-15 Identities = 168/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 698736 GCTTGTTTGTATGCTGGAATAAAAATATCAGGAACAAATGTTGAGGTTGCGCCAGGTCAA 698795 ||||| |||||||| || | || || ||||| |||| ||| || || ||||||||| Sbjct 21923 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 21864 Query 698796 CACGAATTTCAAATTGGACCAGTTGAAGGTATTGATGTTGCAGATCAATTATGGATTGCA 698855 ||||||||| | || ||| ||||||||||| | | | |||||| | |||||| | Sbjct 21863 TTTGAATTTCAAGTAGGTCCATGTGAAGGTATTGGTATGGGAGATCATCTTTGGATTTCT 21804 Query 698856 AGATATATTTTGGAAAAATTATCAGAAAATCATGGGAAATATATTGTTTA-TGATCCAAA 698914 | ||||| |||||| | |||||| | | | || | || | | || | |||| || Sbjct 21803 CGTTATATCTTGGAACGTGTTTCAGAAGA-CTTTGGTATCATTGTCTCTATTCATCCTAA 21745 Query 698915 ACCTCTTAAAGGAGATTGGAATGGATCAGGATGTCATACTAATTTCAGTACAGAATCAAT 698974 ||| | || || |||||||| || | || ||||| || || || ||| ||| ||| Sbjct 21744 GCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAGAAAT 21685 Query 698975 G 698975 | Sbjct 21684 G 21684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268143039639764