Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq578 102 4e-17
seq723 96.9 2e-15
>seq578
Length=440600
Score = 102 bits (112), Expect = 4e-17
Identities = 189/273 (69%), Gaps = 6/273 (2%)
Strand=Plus/Minus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
|||||| ||||||| ||| ||| | || |||||| || ||| || | ||| ||
Sbjct 115960 ATTTGGGCAGAATAGGGTCCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGG 115901
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007
| |||| | ||||| || | || | ||||| | ||||| || ||||| |||||
Sbjct 115900 AGTCCAGAGGGCATAGAAGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCG 115841
Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067
|| || ||||| ||||| || || |||||||| || || | |||||||| ||| |||
Sbjct 115840 AAGGTCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACC 115781
Query 26068 TTTTC--TTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAAC 26125
| || |||| | || || || |||||||||||||| | ||||| ||| | |
Sbjct 115780 AGGGCGCTTGTTCC--CGCCCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGC 115723
Query 26126 ATTGGAACTAATCCAGTT-GAAAATCCGTTTGT 26157
|| || || || || ||| ||| |||||| ||
Sbjct 115722 ATAGGGAC-AAGCCCGTTGGAAGTTCCGTTAGT 115691
>seq723
Length=18298
Score = 96.9 bits (106), Expect = 2e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 24683 ACTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAA 24742
||||| ||| ||| ||| | ||| ||||| ||||| || ||| ||||||||| | |||
Sbjct 4410 ACTGCAGGTCTAGATCTCAAATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAA 4469
Query 24743 AAATGCATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGA 24802
|| ||||| || || | ||| ||| ||||| | | |||||| ||||| ||||||
Sbjct 4470 AAGTGCATAGAGGTCAATTTGCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGA 4529
Query 24803 GCTTGGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATA 24862
| |||| | |||| | |||||| || || | |||||| || ||| | || ||
Sbjct 4530 GATTGGTCGATAAAAGCTCCTCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATC 4589
Query 24863 TCGTAAGCTGTTTTGTATCTCTCTTT 24888
|| | ||||||||||| || |||
Sbjct 4590 TCCCATACTGTTTTGTATAGCTTTTT 4615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253037400251225
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |