Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq680 120 4e-22 >seq680 Length=136445 Score = 120 bits (132), Expect = 4e-22 Identities = 170/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 ||||| || ||||||| | || ||| || ||||||| ||||| |||||||| ||| Sbjct 29772 CCATGGTAGACTGCATACATGGCACTCATGTTGGCGAGCAAGGCTTGCGCTGTGCAAATG 29713 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391 || |||||||| || || | | ||| |||||||||||||| || || || | ||| Sbjct 29712 TTGCTGGTTGCCTTTTCACGACGAATGTGCTGCTCTCTAGTCTGGAGCGCCAGTCTAAGA 29653 Query 139392 GCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTA 139451 ||| | || || || ||| ||| ||| |||| | ||||| ||||| | ||| Sbjct 29652 GCACGGTTTCCCAGTCTATCCTTTGAGACACCAACAAGGCGTCCAGGGATCTTACGCTTG 29593 Query 139452 TACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACC 139510 ||||| || | | ||||| ||||||||||| |||||| | ||||| |||| ||| Sbjct 29592 TACTTATCCGCACAAGAGAAGAAAGCAGCATGAGGGCCTCCGAAGCCCATGGGAACACC 29534 Score = 118 bits (130), Expect = 1e-21 Identities = 173/245 (71%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 138171 AGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAG 138230 ||||| | || |||||||| || || |||||||| || ||||| || || ||||||||| Sbjct 30924 AGATGCTCAGCAACACCAATGGGTCCCACGCCAGGGCCACCACCGCCGTGAGGAATACAG 30865 Query 138231 AATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGA 138290 || ||||| |||| || | || || |||||||| ||| || | || || Sbjct 30864 AAGGTCTTGTGTAGGTTCAAGTGGCAGACATCTGCTCCAATCTCTCCAGGAGAGCAAAGT 30805 Query 138291 CCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACG 138350 || | ||||||||| | || ||||| || | ||| |||||||| |||| || || ||| Sbjct 30804 CCAATCTGTGCATTCATGTTGGCACCGTCCATATAGACCTGACCGCCATATTCGTGCACG 30745 Query 138351 ATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATC 138410 ||||| || | || | ||||| | || || ||||| ||| |||||||| | | Sbjct 30744 ATCTTGCAGACCTCTTTGATGCCGGGCTCGAAGACACCGAAAGTGCTGGGATATGTGACC 30685 Query 138411 ATAAT 138415 ||||| Sbjct 30684 ATAAT 30680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578992298804360