Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq219 260 2e-64
>seq219
Length=30711
Score = 260 bits (288), Expect = 2e-64
Identities = 521/761 (68%), Gaps = 21/761 (3%)
Strand=Plus/Minus
Query 47553 AACCAATTGTTTAAAAGAAGTTTTAGGTTCCCAACCCAATTTTTTCTTTGCCTTAGAGGC 47612
|||||||| | ||||| | || | | ||| || |||| | | |||||||| | |
Sbjct 13360 AACCAATTCGTCAAAAGTAACCTTGCGCTTCCAGCCTAATTCTGTGTTTGCCTTTGTAGG 13301
Query 47613 ATCACCTAATAAGGTCTCTACTTCAGCAGGACGGAAATATTTAGAGTCAATTCTGATA-- 47670
|||||| |||||| || ||||||||||||||||| || || | |||||| | | |
Sbjct 13300 ATCACCCAATAAGAGATCAACTTCAGCAGGACGGAAGTACTTGGGGTCAATACGCACACG 13241
Query 47671 -ACCGTTTTACCA---TCAGAATCAATACCAACTTCATCAAGACCAGAACCTTCCCATCT 47726
||| || || |||| || |||||||||| | | ||| |||||||||
Sbjct 13240 GACC---TTGCCTGTTTCAGCGTCTTTACCAACTTCGTTCACACCTTCACCTTCCCAAAC 13184
Query 47727 AATATTCATATCAAAATAAGGTGCA-GATTCCTCAACAAACTGACGGACAGAATATTGAT 47785
|||| | | || | | || | | | || ||||| | ||| | | | |
Sbjct 13183 AATAGT-ACGTCCAGTCACCTTGAAAGCCTTTTCGACAAAGCTTCTGACTGTGTGTGTTT 13125
Query 47786 TTCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCT 47845
|| || || | || ||||| | ||| | ||||| || ||||| | ||||||| | |
Sbjct 13124 CACCAGTAGCCAAGACGAAATCTTGAGGCTGATCTTGCTGCAGCATGAGCCACATACCTT 13065
Query 47846 CGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAAC 47905
|||||||||| | ||||||||||| ||||| ||||||| ||| || ||||| | |
Sbjct 13064 CGACATAATCACGAGCATGTCCCCAATCACGCTTAGCATCAATATTACCGAGATAAAGGC 13005
Query 47906 AGTCTTG-CTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAA 47964
| ||||| | | || | ||| || | || | |||||||| || || || ||
Sbjct 13004 ACTCTTGACGTCCCAAGTG-GATATCTGCGACAGCACGAGTAATCTTTCGGGTAACGAAG 12946
Query 47965 GTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCG 48024
|| ||||| | || |||||||| || || ||||||||| |||||||| |||| |
Sbjct 12945 GTACGGCCACGACGAGGTGATTCATGGTTGAATAGAATACCATTACAGGCAAACATATTG 12886
Query 48025 TATGATTCACGATAGTT--CTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAG 48082
||||||||||| ||||| | || ||||| || ||||| || || || ||||||||||
Sbjct 12885 TATGATTCACGGTAGTTGACCGTA--ATCCAATAACCATAAAGCTTGGCTACACCATAAG 12828
Query 48083 GAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAA 48142
| ||||| |||||||| ||||| || || | || || || || || |||||||| |
Sbjct 12827 GGGAACGGGGATAGAAGGGTGTTGTTTCCTTTTGGGGTGTTTCAACTACTTTACCATAGA 12768
Query 48143 GTTCACTGGTGGATGCTTGATAGATACGAACCCTATC--TTCCATCTCAAGCAAACGGAC 48200
||||| ||| || |||||||||| |||||| | ||| || | | |||| |||||
Sbjct 12767 GTTCAGAGGTAGAAGCTTGATAGAAACGAACACGATCGGTTAAACCACAAG--TACGGAT 12710
Query 48201 TGCCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTC 48260
|| ||||| | | || ||||| | || || | ||| ||||| || | ||| ||
Sbjct 12709 AGCATCAAGTAAACGAAGTGTGCCAAGAGCGTCGACGTCACCGGTATATTCTGACATGTC 12650
Query 48261 AAACGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAA 48301
||| || ||||| |||||| || || ||||||| ||||
Sbjct 12649 AAAAGAGACCTTGACATGAGATTGAGCTGCAAGATTGTAAA 12609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665487387352760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |