Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq347 132 6e-26 seq268 132 6e-26 seq578 129 7e-25 seq657 109 7e-19 >seq347 Length=15602 Score = 132 bits (146), Expect = 6e-26 Identities = 214/305 (70%), Gaps = 2/305 (1%) Strand=Plus/Plus Query 13607 TGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCG-GGTCTCTC 13665 |||||||| || ||||||| |||||||| || || | || | ||| | ||| | || Sbjct 4965 TGTACTCTGATAATCACAGAAGGTGATTCAGCCAAGTCGCTTGTC-TTGAGTGGTATGTC 5023 Query 13666 TGTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCG 13725 || ||||||||||| |||| ||||| ||||| |||| |||||| ||| ||||| Sbjct 5024 AGTAGTTGGTCGTGACTACTATGGTGTTTTCCCCATTCGTGGTAAACTATTGAACGTTCG 5083 Query 13726 GGACGCTTCGGTGGCACAGCTCACATCAAACCAGGAGTTCAACGATCTCAAGAAGATCCT 13785 || | ||| || | |||| || | || |||| | ||||| || || Sbjct 5084 TGATGTTTCTAATGCTGAACTCATGAAGAATGAAGAAATCAAAAACATCAAGGCTATTCT 5143 Query 13786 TGGTCTTCAACAAGGAAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTAT 13845 ||||||||| || || ||| | || || |||| ||| | || ||||||||| | || Sbjct 5144 TGGTCTTCAGCATGGTAAAAAGTATGAAAGTGTTGATGAGTTACGATATGGTCGTTTGAT 5203 Query 13846 GATTATGACAGATGCCGATAATGATGGTTCTCACATCAAGGGTCTCATCCTAAATATGAT 13905 ||| ||||||||| ||| |||||||||| || ||||||||||| ||| | || | || Sbjct 5204 GATCATGACAGATCAAGATCATGATGGTTCACATATCAAGGGTCTGATCATCAACTTTAT 5263 Query 13906 CCACT 13910 | ||| Sbjct 5264 CGACT 5268 >seq268 Length=14648 Score = 132 bits (146), Expect = 6e-26 Identities = 214/305 (70%), Gaps = 2/305 (1%) Strand=Plus/Plus Query 13607 TGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCG-GGTCTCTC 13665 |||||||| || ||||||| |||||||| || || | || | ||| | ||| | || Sbjct 5007 TGTACTCTGATAATCACAGAAGGTGATTCAGCCAAGTCGCTTGTC-TTGAGTGGTATGTC 5065 Query 13666 TGTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCG 13725 || ||||||||||| |||| ||||| ||||| |||| |||||| ||| ||||| Sbjct 5066 AGTAGTTGGTCGTGACTACTATGGTGTTTTCCCCATTCGTGGTAAACTATTGAACGTTCG 5125 Query 13726 GGACGCTTCGGTGGCACAGCTCACATCAAACCAGGAGTTCAACGATCTCAAGAAGATCCT 13785 || | ||| || | |||| || | || |||| | ||||| || || Sbjct 5126 TGATGTTTCTAATGCTGAACTCATGAAGAATGAAGAAATCAAAAACATCAAGGCTATTCT 5185 Query 13786 TGGTCTTCAACAAGGAAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTAT 13845 ||||||||| || || ||| | || || |||| ||| | || ||||||||| | || Sbjct 5186 TGGTCTTCAGCATGGTAAAAAGTATGAAAGTGTTGATGAGTTACGATATGGTCGTTTGAT 5245 Query 13846 GATTATGACAGATGCCGATAATGATGGTTCTCACATCAAGGGTCTCATCCTAAATATGAT 13905 ||| ||||||||| ||| |||||||||| || ||||||||||| ||| | || | || Sbjct 5246 GATCATGACAGATCAAGATCATGATGGTTCACATATCAAGGGTCTGATCATCAACTTTAT 5305 Query 13906 CCACT 13910 | ||| Sbjct 5306 CGACT 5310 >seq578 Length=440600 Score = 129 bits (142), Expect = 7e-25 Identities = 407/622 (65%), Gaps = 8/622 (1%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| | ||||| || || |||| |||||||| || ||| | || || Sbjct 115397 CCTCAGCACATGATTATGCGTGTTGCGGTCGGAATCCACGGTGATGACCTCGAGAAGGTT 115456 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| | ||||||||| | || |||| |||||| | || || || || Sbjct 115457 ATCGAGACCTACAATCTGATGTCCCA-GAAATACTTCACTCACGCCTCGCCGACTCTGTT 115515 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || ||||| || |||||| || || ||||||||||||| | |||||||| Sbjct 115516 CAACGCCGGTACTCCTCAGCCGCAGCTGGCCTCCTGCTTCCTTATCGATATGAAGGAGGA 115575 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | |||||||||| || | | | ||||| ||||| ||| || || Sbjct 115576 CAGCATTGAGGGTATCTATGACACCTTGAAGACTTGTGCCATGATCTCCAAGACTGCGGG 115635 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 |||||||| | || |||| | | | || | ||| || | || || || Sbjct 115636 TGGTATTGGTCTCAACGTCCACCGTATCCGTGCTACAGGTTCTTACATCGGTGGTACTAA 115695 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || || | || || | || |||||||| || || ||| ||| || | || || Sbjct 115696 CGGAACTTCCAACGGGCTTGTCCCTATGCTTCGAGTGTTCAACAACACTGCAAGATACGT 115755 Query 75571 AAATCA-AGCGGG--GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGC 75627 | || ||||| ||| || | |||| ||||| |||| || ||||| | Sbjct 115756 TGACCAGGGCGGGAACAAGCGCCCTGGTGCTTTCGCTATCTACCTGGAGCCCTGGCACTC 115815 Query 75628 CGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA- 75686 ||| ||| | |||||| | || | || ||||| ||| | ||||||| || | | | Sbjct 115816 CGACATCTTTGAGTTCTTGGACCTTCGCAAGAACCACGGTAAGGAAGAGG-TCAGAGCAC 115874 Query 75687 GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTG 75746 | || ||||| | |||| |||| ||| || || ||||||||||| |||||| | Sbjct 115875 GTGACCTCTTCTATGCCCTCTGGACTCCCGATCTCTTCATGAAGCGTGTTGAGTCTAACG 115934 Query 75747 GTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGG 75806 || | ||| | || ||||| ||| | |||| || ||||| || || | || || | Sbjct 115935 GTGACTGGACCCTATTCTGCCCAAATGAGGCTCCCGGTCTTTCTGATGTCTATGGCGATG 115994 Query 75807 AGTTTGAAGCCCTCTA-CACAA 75827 ||||||| || || || ||||| Sbjct 115995 AGTTTGAGGCTCTGTACCACAA 116016 Score = 105 bits (116), Expect = 8e-18 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | || |||||| | | ||||| ||||| || | || | ||||| ||||||||| Sbjct 116121 TGGTATGCCATTCTCGAGGCCCAGACCGAGACCGGTAACCCCTTCATGCTGTACAAGGAT 116180 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 || || ||||||||||| ||||| ||||| |||| || ||| ||||| || || ||| Sbjct 116181 GCGTGCAACAAGAAGAGCAACCAGAAGAACCTGGGTACTATCCGCAGCTCTAACCTCTGC 116240 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATC 76053 || || || | |||||||| | |||||| || |||||||| ||||| || Sbjct 116241 ACTGAGATCATCGAGTACACTGCCCCCGATGAGGTCGCCGTTTGCAACTTGGCCTC 116296 >seq657 Length=446211 Score = 109 bits (120), Expect = 7e-19 Identities = 294/448 (66%), Gaps = 4/448 (1%) Strand=Plus/Minus Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130 |||||| ||||| | |||| || || ||| ||||||||||||||||| || || ||| Sbjct 212232 TTCGCCCAGCGCTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTC 212173 Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190 | |||| | ||| |||||||||| || |||||||| || || |||||| || || Sbjct 212172 GCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCTAACGAG 212113 Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTG 65250 || || || || ||||||||||| ||| || || || ||| ||| || Sbjct 212112 CTGATCTCTCGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTCCCACCTG 212053 Query 65251 CGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAG 65310 || | ||| | | || | || | ||| | || || || || |||||| Sbjct 212052 AACAACCGCCCCTCACCTGAGGTTGTCGAGAAGATCATCGTTGATGCCGTCGACATTGAG 211993 Query 65311 AAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATG 65370 | | |||| | |||||| ||||| | ||| | ||||||||||| || ||| Sbjct 211992 CAGGAGTTCCTGACGGACGCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCAAGCTCATG 211933 Query 65371 TCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCATT 65430 | | ||||||| |||| || | || || || || || || || | | Sbjct 211932 TGCCAGTACATCGAGTTCGTTGCCGACCGCCTGCTGGTCTCTCTT--GGCAACAAGAAGT 211875 Query 65431 --TGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCA 65488 | ||||| | || || || ||||| ||||| ||||| || | ||| ||||||| Sbjct 211874 ACTACAACGCCACAAACCCCTTCGACTTCATGGACAACATCTCGCTCGCTGGCAAGACCA 211815 Query 65489 ACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 ||||||| |||||||| || || ||||| Sbjct 211814 ACTTCTTCGAGAAGCGTGTCGGTGACTA 211787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596563313647840