Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq347 132 6e-26
seq268 132 6e-26
seq578 129 7e-25
seq657 109 7e-19
>seq347
Length=15602
Score = 132 bits (146), Expect = 6e-26
Identities = 214/305 (70%), Gaps = 2/305 (1%)
Strand=Plus/Plus
Query 13607 TGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCG-GGTCTCTC 13665
|||||||| || ||||||| |||||||| || || | || | ||| | ||| | ||
Sbjct 4965 TGTACTCTGATAATCACAGAAGGTGATTCAGCCAAGTCGCTTGTC-TTGAGTGGTATGTC 5023
Query 13666 TGTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCG 13725
|| ||||||||||| |||| ||||| ||||| |||| |||||| ||| |||||
Sbjct 5024 AGTAGTTGGTCGTGACTACTATGGTGTTTTCCCCATTCGTGGTAAACTATTGAACGTTCG 5083
Query 13726 GGACGCTTCGGTGGCACAGCTCACATCAAACCAGGAGTTCAACGATCTCAAGAAGATCCT 13785
|| | ||| || | |||| || | || |||| | ||||| || ||
Sbjct 5084 TGATGTTTCTAATGCTGAACTCATGAAGAATGAAGAAATCAAAAACATCAAGGCTATTCT 5143
Query 13786 TGGTCTTCAACAAGGAAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTAT 13845
||||||||| || || ||| | || || |||| ||| | || ||||||||| | ||
Sbjct 5144 TGGTCTTCAGCATGGTAAAAAGTATGAAAGTGTTGATGAGTTACGATATGGTCGTTTGAT 5203
Query 13846 GATTATGACAGATGCCGATAATGATGGTTCTCACATCAAGGGTCTCATCCTAAATATGAT 13905
||| ||||||||| ||| |||||||||| || ||||||||||| ||| | || | ||
Sbjct 5204 GATCATGACAGATCAAGATCATGATGGTTCACATATCAAGGGTCTGATCATCAACTTTAT 5263
Query 13906 CCACT 13910
| |||
Sbjct 5264 CGACT 5268
>seq268
Length=14648
Score = 132 bits (146), Expect = 6e-26
Identities = 214/305 (70%), Gaps = 2/305 (1%)
Strand=Plus/Plus
Query 13607 TGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCG-GGTCTCTC 13665
|||||||| || ||||||| |||||||| || || | || | ||| | ||| | ||
Sbjct 5007 TGTACTCTGATAATCACAGAAGGTGATTCAGCCAAGTCGCTTGTC-TTGAGTGGTATGTC 5065
Query 13666 TGTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCG 13725
|| ||||||||||| |||| ||||| ||||| |||| |||||| ||| |||||
Sbjct 5066 AGTAGTTGGTCGTGACTACTATGGTGTTTTCCCCATTCGTGGTAAACTATTGAACGTTCG 5125
Query 13726 GGACGCTTCGGTGGCACAGCTCACATCAAACCAGGAGTTCAACGATCTCAAGAAGATCCT 13785
|| | ||| || | |||| || | || |||| | ||||| || ||
Sbjct 5126 TGATGTTTCTAATGCTGAACTCATGAAGAATGAAGAAATCAAAAACATCAAGGCTATTCT 5185
Query 13786 TGGTCTTCAACAAGGAAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTAT 13845
||||||||| || || ||| | || || |||| ||| | || ||||||||| | ||
Sbjct 5186 TGGTCTTCAGCATGGTAAAAAGTATGAAAGTGTTGATGAGTTACGATATGGTCGTTTGAT 5245
Query 13846 GATTATGACAGATGCCGATAATGATGGTTCTCACATCAAGGGTCTCATCCTAAATATGAT 13905
||| ||||||||| ||| |||||||||| || ||||||||||| ||| | || | ||
Sbjct 5246 GATCATGACAGATCAAGATCATGATGGTTCACATATCAAGGGTCTGATCATCAACTTTAT 5305
Query 13906 CCACT 13910
| |||
Sbjct 5306 CGACT 5310
>seq578
Length=440600
Score = 129 bits (142), Expect = 7e-25
Identities = 407/622 (65%), Gaps = 8/622 (1%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| | ||||| || || |||| |||||||| || ||| | || ||
Sbjct 115397 CCTCAGCACATGATTATGCGTGTTGCGGTCGGAATCCACGGTGATGACCTCGAGAAGGTT 115456
Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTT 75330
| ||||| ||| | ||||||||| | || |||| |||||| | || || || ||
Sbjct 115457 ATCGAGACCTACAATCTGATGTCCCA-GAAATACTTCACTCACGCCTCGCCGACTCTGTT 115515
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
||| || ||||| || |||||| || || ||||||||||||| | ||||||||
Sbjct 115516 CAACGCCGGTACTCCTCAGCCGCAGCTGGCCTCCTGCTTCCTTATCGATATGAAGGAGGA 115575
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
| || | |||||||||| || | | | ||||| ||||| ||| || ||
Sbjct 115576 CAGCATTGAGGGTATCTATGACACCTTGAAGACTTGTGCCATGATCTCCAAGACTGCGGG 115635
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510
|||||||| | || |||| | | | || | ||| || | || || ||
Sbjct 115636 TGGTATTGGTCTCAACGTCCACCGTATCCGTGCTACAGGTTCTTACATCGGTGGTACTAA 115695
Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570
|| || | || || | || |||||||| || || ||| ||| || | || ||
Sbjct 115696 CGGAACTTCCAACGGGCTTGTCCCTATGCTTCGAGTGTTCAACAACACTGCAAGATACGT 115755
Query 75571 AAATCA-AGCGGG--GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGC 75627
| || ||||| ||| || | |||| ||||| |||| || ||||| |
Sbjct 115756 TGACCAGGGCGGGAACAAGCGCCCTGGTGCTTTCGCTATCTACCTGGAGCCCTGGCACTC 115815
Query 75628 CGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA- 75686
||| ||| | |||||| | || | || ||||| ||| | ||||||| || | | |
Sbjct 115816 CGACATCTTTGAGTTCTTGGACCTTCGCAAGAACCACGGTAAGGAAGAGG-TCAGAGCAC 115874
Query 75687 GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTG 75746
| || ||||| | |||| |||| ||| || || ||||||||||| |||||| |
Sbjct 115875 GTGACCTCTTCTATGCCCTCTGGACTCCCGATCTCTTCATGAAGCGTGTTGAGTCTAACG 115934
Query 75747 GTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGG 75806
|| | ||| | || ||||| ||| | |||| || ||||| || || | || || |
Sbjct 115935 GTGACTGGACCCTATTCTGCCCAAATGAGGCTCCCGGTCTTTCTGATGTCTATGGCGATG 115994
Query 75807 AGTTTGAAGCCCTCTA-CACAA 75827
||||||| || || || |||||
Sbjct 115995 AGTTTGAGGCTCTGTACCACAA 116016
Score = 105 bits (116), Expect = 8e-18
Identities = 129/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937
||| | || |||||| | | ||||| ||||| || | || | ||||| |||||||||
Sbjct 116121 TGGTATGCCATTCTCGAGGCCCAGACCGAGACCGGTAACCCCTTCATGCTGTACAAGGAT 116180
Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997
|| || ||||||||||| ||||| ||||| |||| || ||| ||||| || || |||
Sbjct 116181 GCGTGCAACAAGAAGAGCAACCAGAAGAACCTGGGTACTATCCGCAGCTCTAACCTCTGC 116240
Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATC 76053
|| || || | |||||||| | |||||| || |||||||| ||||| ||
Sbjct 116241 ACTGAGATCATCGAGTACACTGCCCCCGATGAGGTCGCCGTTTGCAACTTGGCCTC 116296
>seq657
Length=446211
Score = 109 bits (120), Expect = 7e-19
Identities = 294/448 (66%), Gaps = 4/448 (1%)
Strand=Plus/Minus
Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130
|||||| ||||| | |||| || || ||| ||||||||||||||||| || || |||
Sbjct 212232 TTCGCCCAGCGCTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTC 212173
Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190
| |||| | ||| |||||||||| || |||||||| || || |||||| || ||
Sbjct 212172 GCCTCTATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCTAACGAG 212113
Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTG 65250
|| || || || ||||||||||| ||| || || || ||| ||| ||
Sbjct 212112 CTGATCTCTCGTGATGAGGGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTCCCACCTG 212053
Query 65251 CGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAG 65310
|| | ||| | | || | || | ||| | || || || || ||||||
Sbjct 212052 AACAACCGCCCCTCACCTGAGGTTGTCGAGAAGATCATCGTTGATGCCGTCGACATTGAG 211993
Query 65311 AAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATG 65370
| | |||| | |||||| ||||| | ||| | ||||||||||| || |||
Sbjct 211992 CAGGAGTTCCTGACGGACGCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCAAGCTCATG 211933
Query 65371 TCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCATT 65430
| | ||||||| |||| || | || || || || || || || | |
Sbjct 211932 TGCCAGTACATCGAGTTCGTTGCCGACCGCCTGCTGGTCTCTCTT--GGCAACAAGAAGT 211875
Query 65431 --TGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCA 65488
| ||||| | || || || ||||| ||||| ||||| || | ||| |||||||
Sbjct 211874 ACTACAACGCCACAAACCCCTTCGACTTCATGGACAACATCTCGCTCGCTGGCAAGACCA 211815
Query 65489 ACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
||||||| |||||||| || || |||||
Sbjct 211814 ACTTCTTCGAGAAGCGTGTCGGTGACTA 211787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596563313647840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |