Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq578 127 6e-24
seq723 122 3e-22
seq819 104 7e-17
seq657 93.3 1e-13
seq214 86.0 2e-11
seq837 84.2 6e-11
seq625 84.2 6e-11
>seq578
Length=440600
Score = 127 bits (140), Expect = 6e-24
Identities = 407/626 (65%), Gaps = 9/626 (1%)
Strand=Plus/Minus
Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC 155969
||||||| ||| || | ||| | ||| | |||||||| ||||| | ||| | ||||
Sbjct 115923 ACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGCATAGAAGAGGTCACGTGC-TCTGAC 115865
Query 155970 -TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028
|| || | ||||| ||||| || || || ||||| || || || | || ||
Sbjct 115864 CTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAGATGTCGGAGTGCCAGGG 115805
Query 156029 CTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGC 156085
|||||| || ||||| ||| |||| | |||| || ||||| || || || | ||
Sbjct 115804 CTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGCCCTGGTCAACGTATCTTGC 115745
Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145
||| || ||||| || | |||||||| | || || |||||||| || || || || |
Sbjct 115744 AGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGGAAGTTCCGTTAGTACCACC 115685
Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTT 156205
|| | ||||| | | || | | || | | || ||||||||||| | ||
Sbjct 115684 GATGTAAGAACCTGTAGCACGGATACGGTGGACGTTGAGACCAATACCACCCGCAGTCTT 115625
Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265
|| || || || ||| | || | | ||||| ||||| || || | |||
Sbjct 115624 GGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACCCTCAATGCTGTCCTCCTTCAT 115565
Query 156266 T--GATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTA 156323
|||| || |||| || | || || | || || || |||||||| || ||
Sbjct 115564 ATCGATA--AGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGTACCGGCGTTGAACAGAGTC 115507
Query 156324 GGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCA 156383
|| | || ||| | || || || | ||||| || ||| ||||| ||| ||||||
Sbjct 115506 GGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTAGGTCTCGATAACCTTCTCG 115447
Query 156384 AGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACA 156443
|| | | ||||| || | || | || | ||| ||| |||||||||||||| ||
Sbjct 115446 AGGTCATCACCGTGGATTCCGACCGCAACACGCATAATCATGTGCTGAGGACGCTCAGCA 115387
Query 156444 ATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCA 156503
| | ||||| || || || || || | ||||||||||| || || ||||| || |
Sbjct 115386 ACCTTTCCATTGATGCGGAGCAGATACGATCGTTCCAGAGTCTTGAATCCGAAGTATTGG 115327
Query 156504 AACAGAAAATCACGGTTGTAATCAAT 156529
| |||||||||| ||| ||||
Sbjct 115326 TAGTTGAAATCACGGTCATAAACAAT 115301
>seq723
Length=18298
Score = 122 bits (134), Expect = 3e-22
Identities = 313/466 (67%), Gaps = 17/466 (4%)
Strand=Plus/Plus
Query 155912 ACGCTCCATAAATACATCACTCGCCCA-AATAGCATAGAAAAGGTCCCTTGC---CTTTG 155967
||||||||| || | |||| | |||| ||| || |||| | ||| | ||| | ||
Sbjct 5834 ACGCTCCATGAAAAGATCAGGCACCCATAATCCCA-AGAACAAGTCGCGTGCGCGCATT- 5891
Query 155968 ACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATA--TCAGGATGGTG 156025
|||||| | || | ||||| || | || |||||||| |||| || |||
Sbjct 5892 --TCCTCAGCACCATTGTTCTTGCGCAAGTCCAAGAATTCG--AATACGTCGACATGCCA 5947
Query 156026 TGGCTCCAGATACATAGCAAAACTACCATTCCTCTTGCCACC--CTGATCT-ACATACCG 156082
|| || | ||| | |||||| |||| || | || ||||| || | | ||| | ||
Sbjct 5948 AGGTTCTATATAGACAGCAAAGTTACCGTTGCGTTTACCACCTCCTTGTGTCACAAAGCG 6007
Query 156083 AGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142
|||||| | ||| ||||| | ||||| |||||||| |||||||| || || || |||||
Sbjct 6008 AGCAGTGTCATTAAAGACTCTGAGCATTGGAATAATGCCATTGGAGGTACCGTTTGTTCC 6067
Query 156143 -GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACC 156201
|||| ||| || ||||| |||| || ||| | | |||| ||| || |
Sbjct 6068 TGCGA-TATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCCAGCAG 6126
Query 156202 ATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTT 156261
| || || || |||| || | | ||||| | | || ||||| ||| || ||||
Sbjct 6127 ACTTGGAGATACGAGCACACGTGGTGATAGTATCGTAGATGCCTTCGATACTGTCCTCTT 6186
Query 156262 CCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTG 156321
|||| | || |||| | ||||||||| ||||| ||||||||||| | ||
Sbjct 6187 TCATTTGAACAAGGAAGCAACTAGACAATTGAGGTTTAGGTGTACCAGCGTTGAACAATG 6246
Query 156322 TAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGT 156367
||||||| |||||| |||| || ||| |||||| ||| || ||
Sbjct 6247 TAGGTGTAGCATGAGTAAAGTATTTAGATGACATAAGATCATAGGT 6292
>seq819
Length=368885
Score = 104 bits (114), Expect = 7e-17
Identities = 159/223 (71%), Gaps = 4/223 (2%)
Strand=Plus/Plus
Query 302596 CGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCA 302655
||||| ||||||||||| | ||| || || || |||||||| ||||| |||||||
Sbjct 227850 CGCTGGATATAACCAGTCTCGGCTGTCTTCACGGCAGTATCAATGAGACCCTCACGACCG 227909
Query 302656 CCCATAGCATGGAAGAATAGCTC--TTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAA 302713
|||| || |||||||| | || || ||| |||| | | ||| || ||||||
Sbjct 227910 GCCATTGCGTGGAAGAAGAATTCCGTTGGAGTCA-AGCCACGGAGGTAAG-AGTTCTCAA 227967
Query 302714 CGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCT 302773
|||||||||| | ||| || || | |||| ||||| || || || || || | || ||
Sbjct 227968 CGAAACCACGGGACTCTGGAGAGTAGTCGTCTTTGGTGAAATGAGGAAGTGTACGGTACT 228027
Query 302774 CATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCC 302816
| ||| | || ||||||||||| || ||| |||||| ||
Sbjct 228028 TGAAACCGAAGGGAATACGCTTTCCTTCGACGGACTGCTGCCC 228070
>seq657
Length=446211
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 133451 AAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGT 133510
||||| | |||||||| ||| ||||||||||||||| | | ||| || ||
Sbjct 212280 AAGAAGGCCGACTGGGCCATTCGCTGGATCCAGGACAAGGAGTCCACTTTCGCCCAGCGC 212221
Query 133511 CTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTT 133570
| ||||| || |||| || ||||| || || ||| ||| | ||| |||||| ||
Sbjct 212220 TTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATCTTC 212161
Query 133571 TGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGG 133630
||||| || |||||||| | | ||||| ||| || |||||||| || || || |
Sbjct 212160 TGGCTGAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCTAACGAGCTGATCTCTCGT 212101
Query 133631 GACGAGGCACTTCACACCGAATTTGC 133656
|| |||| || |||||||| || ||
Sbjct 212100 GATGAGGGTCTGCACACCGACTTCGC 212075
>seq214
Length=22576
Score = 86.0 bits (94), Expect = 2e-11
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 289027 TTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086
||||||| ||||||||||| || | || || | ||| |||| |||| | || ||
Sbjct 15090 TTACCAATCGCATCAATTTCATCCACAAAGATGATACAAGGAGCGTTTTTCTTGGCTGTT 15031
Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146
|||||||| || | || ||||| | || | || ||| |||| || ||||| |||||
Sbjct 15030 GCAAATAAATCACGGACTCGGGAAGAGCCCACGCCGACAAACATCTCAACAAACTCAGAG 14971
Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206
| || || | || | ||| |||||| |||||| |||| | || | ||| |||
Sbjct 14970 CCAGACACGCTATAAAAGGGAACACCTGCTTCTCCTGCTGTTGCCTTTGCTAAAAGCGTC 14911
Query 289207 TTACCTGTTCCAGGTGGTCC 289226
||||| || ||||| || ||
Sbjct 14910 TTACCCGTACCAGGAGGACC 14891
>seq837
Length=415093
Score = 84.2 bits (92), Expect = 6e-11
Identities = 123/173 (71%), Gaps = 1/173 (1%)
Strand=Plus/Plus
Query 251497 ATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCG 251556
|||| ||| ||||||||||| || |||| ||| |||||||| ||||| | | ||| |||
Sbjct 177219 ATCAGACAGTCACGCTCCATCTCTCCGAGACGGAGACCACCGTCGCGGGATCGACCTTCG 177278
Query 251557 GCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTATCATTT 251616
| || || || ||||| || | ||||||| || ||| || ||| || |
Sbjct 177279 GTGGGTTGGCGGGTGAGGGTAGCGCGAGGACCGCGGGCACGGGAGTGCATCTTGTCTTGA 177338
Query 251617 ACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCTCGAAGG 251669
||||| ||||| || ||||||| | ||||||| |||||| | | |||||
Sbjct 177339 ACCATGTGCTTCAGTTTCTGGTAGTAGATGGGACCGGTGAAGACG-TAGAAGG 177390
>seq625
Length=387040
Score = 84.2 bits (92), Expect = 6e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|||||||| | |||||||||||| || |||||||| |||||||| ||||||||||| ||
Sbjct 271115 GCACCGTGAGCAATCATACAATCGCGTTCCATTTCTCCGAAACGGAGACCACCATCACGT 271174
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAG 251573
|| | ||| || | ||||| || || ||
Sbjct 271175 GCACGACCTTCTACCGGCTGCCGGGTCAG 271203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471801702990091
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |