Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq657 152 6e-31
seq820 129 7e-24
seq578 114 2e-19
seq728 98.7 1e-14
seq723 89.7 6e-12
>seq657
Length=446211
Score = 152 bits (168), Expect = 6e-31
Identities = 226/319 (71%), Gaps = 1/319 (0%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| ||||||||||
Sbjct 211778 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGCGAGATG 211837
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||| | ||| ||||| | | ||||||| ||| | | || || || |
Sbjct 211838 TTGTCCATGAAGTCGAAGGGGTTTGTGGCGTTGTAGTACTTCTTGTTGCCAAGAGAGACC 211897
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|||||||||||||| || ||||||||||||||||||||||| || |||||| || | |
Sbjct 211898 AGCAGGCGGTCGGCAACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATACCAAGG 211957
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || || || || | || ||| ||||| | ||| || |||||||| || ||||||
Sbjct 211958 AGGGCAACGGGGAGGGCGTCCGTCAGGAACTCCTGCTCAATGTCGACGGCATCAACGATG 212017
Query 868931 ATCTGCCTGGGCACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGCA 868990
|||| | | || || | ||||| |||| || | | | ||||| || ||
Sbjct 212018 ATCTTCTCGACAACCTCAGGTGAGGGGCGGTTGTTCAGGTGGGAGAACAGCAGACAAGCG 212077
Query 868991 AAGTCGCAGTGCA-ACCCT 869008
|||||| ||||| |||||
Sbjct 212078 AAGTCGGTGTGCAGACCCT 212096
Score = 118 bits (130), Expect = 1e-20
Identities = 178/251 (71%), Gaps = 3/251 (1%)
Strand=Plus/Plus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|||||||||||||| || ||||||||| ||||| ||| | |||| | || |||
Sbjct 212434 GAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCAGGGACCTGG 212493
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
||||| |||| || || | ||||||||| ||||||||||| ||||||||
Sbjct 212494 ACCTCGCCACTGAAACGCTCGACGAGGTTCTCGTTGACGATGCCGTCAGACGCGGCGAAG 212553
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809
||||||||||| || ||| |||| ||||||||| | | ||| ||| ||||| |
Sbjct 212554 AAAGCCAGGACATGGGAGATGAAGTAGCGCTCGTCATTGTTGAGGCGGTTGTTCCAGTCG 212613
Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869
||| | || || | |||||| || ||||||| || ||||| ||||| |||
Sbjct 212614 TGCAGGTCCTTGGACAGATCGATCTCCTCAGCAGTCCAGAAGGAAGCCTCTGCCTTCTTG 212673
Query 869870 TACATCTCCCA 869880
||||||| |||
Sbjct 212674 TACATCTGCCA 212684
Score = 95.1 bits (104), Expect = 1e-13
Identities = 139/195 (71%), Gaps = 9/195 (5%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| || || ||| ||||| ||||| |||| || || ||||||||||| |||||
Sbjct 212092 ACCCTCATCACGAGAGATCAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGGCCACGCTT 212151
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||| ||||| ||||| | | |||| ||| ||||| ||||| ||||| || || || ||
Sbjct 212152 CTTCAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCAACAGCAGCGAA 212211
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG---TTGATCCACTTCATCGC 869355
| | | | |||| ||| || ||| || ||||||| | |||||| || ||
Sbjct 212212 GGCAACCAAGCGCTGGGCGAAAGTG--GA----CTCCTTGTCCTGGATCCAGCGAATGGC 212265
Query 869356 CCAGTCGGCCTTTTT 869370
|||||||||||| ||
Sbjct 212266 CCAGTCGGCCTTCTT 212280
>seq820
Length=255357
Score = 129 bits (142), Expect = 7e-24
Identities = 95/111 (86%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| |||||||||||||| ||||| |||| ||||| | || |||||| |||| ||||||
Sbjct 231205 GCTGCCAACTACCTCGATATCAAAGCTCTTCTCGACGTCGGCTGCAAGACTGTTGCCAAC 231264
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
||||||||||||||||| ||||| ||||| ||||||||||| |||||| ||
Sbjct 231265 ATGATCAAGGGCAAGTCTCCCGAAGAGATTCGCAAGACCTTCAACATCCAG 231315
>seq578
Length=440600
Score = 114 bits (126), Expect = 2e-19
Identities = 121/157 (77%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCG 19104
|||||||||| || || || ||||| |||||| | |||||||| | || |||||||
Sbjct 292318 AGGACAGCATTGGAGGAACCGTGACTTGCGTGATCAGAAACGTGCCAGTCGGTCTCGGCG 292259
Query 19105 AGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCA 19164
|||| ||||| |||||| | ||||| ||| |||||||||||||| || || || |
Sbjct 292258 AGCCTTGCTTCGACAAGCTGGAGGCTAAGCTGGCCCACGCCATGCTCAGTATTCCAGCTA 292199
Query 19165 CCAAGGGATTCGAGATTGGCAGCGGGTTTGCGGGTGC 19201
|||||||||| || ||||| | | ||||| |||| ||
Sbjct 292198 CCAAGGGATTTGAAATTGG-ATCTGGTTT-CGGGGGC 292164
>seq728
Length=11653
Score = 98.7 bits (108), Expect = 1e-14
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| ||||| || | | ||| || || || ||||| ||||| || || | ||
Sbjct 4445 GCTTGGCGAGTTCACCAGGGAGGATGAGACGAACAGCGGTTTGGATTTCACGAGAAGAGA 4386
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| |||||||| | |||| | ||| || ||| | || || || | |
Sbjct 4385 TGGTGGAACGCTTGTTGTAAGCAGCCAACTTGGAGGCTTCAGTGGCAATACGTTCAAAGA 4326
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
| || |||||||| ||||||| || ||||| | |||||||||||| || |||||||
Sbjct 4325 TATCATTGACAAAAGAGTTCAAGATGGACATGGCCTTGTTGGAGATACCGGTATCGGGGT 4266
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| || ||||| | |||||||||||| | || |||||
Sbjct 4265 GGACTTGCTTCAAGACCTTGTAGATGTAAGAGGAGTA 4229
>seq723
Length=18298
Score = 89.7 bits (98), Expect = 6e-12
Identities = 141/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1630076 AGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGACTCGCCGTTGG 1630135
|||| || ||||| |||||||| | |||||| || | | ||| ||||| ||||| |
Sbjct 6004 AGCGAGCAGTGTCATTAAAGACTCTGAGCATTGGAATAATGCCATTGGAGGTACCGTTTG 6063
Query 1630136 TGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCGATGCCGCCGG 1630195
| || || | || | ||| | | | || | ||| || || |||| ||| | ||||| |
Sbjct 6064 TTCCTGCGATATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCCAG 6123
Query 1630196 CCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCGATCGAGTCGG 1630255
| ||||||||||| | || ||| ||| || ||||||||||| ||||| |||
Sbjct 6124 CAGACTTGGAGATACGAGCACACGTGGTGATAGTATCGTAGATGCCTTCGATACTGTCCT 6183
Query 1630256 CCTTCATGTCCACGAGAAAGCA 1630277
| ||||| | || || |||||
Sbjct 6184 CTTTCATTTGAACAAGGAAGCA 6205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107070019472231
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |