Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq812 125 6e-24 seq744 114 1e-20 seq609 107 2e-18 >seq812 Length=913560 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| |||| || | || || || ||||| || | || || ||| ||| | Sbjct 528751 ATGCAGATTTTTGTTAAGACTTTGACTGGCAAGACTATCACATTGGAGGTTGAATCCAGC 528692 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || ||||| |||||||| ||||| || ||||| || || Sbjct 528691 GACACAATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAG 528632 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||| || || ||||||||||| | | | |||| || || ||| Sbjct 528631 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGTACCTTGTCCGACTACAAC 528572 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || |||||||| || || ||| |||| ||||| | || || || Sbjct 528571 ATCCAGAAGGAATCTACCCTGCACCTGGTTCTGCGACTCCGTGGTGG 528525 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || ||||| || |||||||| || ||||| ||| | | Sbjct 528979 ATGCAGATTTTCGTCAAGACTCTGACCGGCAAGACTATTACTCTGGAAGTCGAATCGTCA 528920 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||||||||| |||||||| || |||||||| || Sbjct 528919 GATACCATCGATAACGTCAAGAGCAAGATCCAAGATAAAGAAGGCATCCCTCCCGACCAG 528860 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || ||| |||| ||| | | | |||| ||||| ||| Sbjct 528859 CAGCGTCTTATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGCACCTTGTCCGATTACAAC 528800 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| || || || ||| | || | || |||| || || Sbjct 528799 ATTCAGAAGGAGTCTACTCTCCACCTTGTCCTCCGCCTGCGTGGTGG 528753 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || ||||| || || | || Sbjct 529207 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 529148 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || || || || |||||||| || Sbjct 529147 GACACCATCGACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCCGACCAG 529088 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| ||||||| || || || ||||| |||||| | | | || || || ||| Sbjct 529087 CAACGTCTGATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACACTCTCCGACTACAAC 529028 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||| | || |||| | || ||||| Sbjct 529027 ATCCAGAAGGAGTCGACCCTTCACCTCGTCCTGCGCCTCCGTGGAGG 528981 >seq744 Length=38458 Score = 114 bits (126), Expect = 1e-20 Identities = 292/441 (66%), Gaps = 29/441 (7%) Strand=Plus/Minus Query 126046 GTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAttttttttATAAAGACAAAGGGT 126105 || ||||| | || ||||| ||| ||||| | ||||||| | |||| | ||| Sbjct 30963 GTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCCATTTTTTGGCTCAAGAAACGTGGT 30904 Query 126106 ATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTGACGAAGGACTCCATACG 126165 | ||||| ||| | || |||||||| || ||||| | |||||| ||||| || ||||| Sbjct 30903 TTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGCCTTCATACT 30844 Query 126166 GACTTTGCATGTCTGTATTACAATAATTATATACCCGAAAATGAAAAGTTGTCTGCTGAC 126225 |||||||| ||||| | ||| ||||| | | ||| || | Sbjct 30843 GACTTTGCTTGTCTTT-----------TATTTACCC-ATCTTCGTAAGCGTCCTAGCCAA 30796 Query 126226 GAAATTTT-AAGTATGT--TCATCGAAGCTGTCAACATTGAAAAGGAATTCTTTACGTCG 126282 ||| | ||| || | || | |||||||||| ||||||| ||||||| || ||| Sbjct 30795 GAACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAGGAATTTTTGACGGAT 30736 Query 126283 GCGCTGCCATGCGATATGTTGGGAATGAATTCTACAGCGATGTGCGAATATATAGAGTTC 126342 || || || | | | | || ||||||||| | ||||||| |||| || || ||| Sbjct 30735 GCTCTTCCCGTTGCTCTCATCGGCATGAATTCTGCTTTGATGTGCCAATACATCGAATTC 30676 Query 126343 GTAGCGGACCGT-------TTGCTCGTCGAATTACGACAACCGAAACACTTTAATACACC 126395 || || || ||| |||||| | || || ||||| || || | ||| Sbjct 30675 GTTGCTGATCGTCTCATGGTTGCTCTTGGATTT--GACAA--GATTTACATGGCTAC--- 30623 Query 126396 CAATCCATTTAACTTTATGAACAATATTTCTCTCGAGGGAAAGACTAACTTTTTCGAGAG 126455 |||||||||| |||||||| ||| || ||||| | || ||||| ||||| || || | Sbjct 30622 CAATCCATTTGACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAA 30563 Query 126456 ACGTGTCGGAGAGTATAAACG 126476 |||||| || ||| |||| Sbjct 30562 GCGTGTCTCTGACTATCAACG 30542 >seq609 Length=32548 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||||||||| || ||||| || ||||| |||||||||||| | || || Sbjct 20868 GTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCAACAACGTCTCATTTTC 20927 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 ||||| ||||| || || || | | | || ||||| ||||||||||||||||| Sbjct 20928 GCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAACATTCAAAAGGAATCT 20987 Query 24899 ACACTACACTTGGT 24912 || || |||||||| Sbjct 20988 ACCCTTCACTTGGT 21001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449892859204040