Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq812 125 6e-24
seq744 114 1e-20
seq609 107 2e-18
>seq812
Length=913560
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| |||| || | || || || ||||| || | || || ||| ||| |
Sbjct 528751 ATGCAGATTTTTGTTAAGACTTTGACTGGCAAGACTATCACATTGGAGGTTGAATCCAGC 528692
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || || ||||| |||||||| ||||| || ||||| || ||
Sbjct 528691 GACACAATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAG 528632
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||||| || || ||||||||||| | | | |||| || || |||
Sbjct 528631 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGTACCTTGTCCGACTACAAC 528572
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || |||||||| || || ||| |||| ||||| | || || ||
Sbjct 528571 ATCCAGAAGGAATCTACCCTGCACCTGGTTCTGCGACTCCGTGGTGG 528525
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || ||||| || |||||||| || ||||| ||| | |
Sbjct 528979 ATGCAGATTTTCGTCAAGACTCTGACCGGCAAGACTATTACTCTGGAAGTCGAATCGTCA 528920
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||||||||| |||||||| || |||||||| ||
Sbjct 528919 GATACCATCGATAACGTCAAGAGCAAGATCCAAGATAAAGAAGGCATCCCTCCCGACCAG 528860
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | |||||||| || || ||| |||| ||| | | | |||| ||||| |||
Sbjct 528859 CAGCGTCTTATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGCACCTTGTCCGATTACAAC 528800
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||| || || || ||| | || | || |||| || ||
Sbjct 528799 ATTCAGAAGGAGTCTACTCTCCACCTTGTCCTCCGCCTGCGTGGTGG 528753
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || ||||| || ||||| || || | ||
Sbjct 529207 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 529148
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || || || || || |||||||| ||
Sbjct 529147 GACACCATCGACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCCGACCAG 529088
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| ||||||| || || || ||||| |||||| | | | || || || |||
Sbjct 529087 CAACGTCTGATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACACTCTCCGACTACAAC 529028
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| ||||| || ||| | || |||| | || |||||
Sbjct 529027 ATCCAGAAGGAGTCGACCCTTCACCTCGTCCTGCGCCTCCGTGGAGG 528981
>seq744
Length=38458
Score = 114 bits (126), Expect = 1e-20
Identities = 292/441 (66%), Gaps = 29/441 (7%)
Strand=Plus/Minus
Query 126046 GTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAttttttttATAAAGACAAAGGGT 126105
|| ||||| | || ||||| ||| ||||| | ||||||| | |||| | |||
Sbjct 30963 GTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCCATTTTTTGGCTCAAGAAACGTGGT 30904
Query 126106 ATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTGACGAAGGACTCCATACG 126165
| ||||| ||| | || |||||||| || ||||| | |||||| ||||| || |||||
Sbjct 30903 TTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGCCTTCATACT 30844
Query 126166 GACTTTGCATGTCTGTATTACAATAATTATATACCCGAAAATGAAAAGTTGTCTGCTGAC 126225
|||||||| ||||| | ||| ||||| | | ||| || |
Sbjct 30843 GACTTTGCTTGTCTTT-----------TATTTACCC-ATCTTCGTAAGCGTCCTAGCCAA 30796
Query 126226 GAAATTTT-AAGTATGT--TCATCGAAGCTGTCAACATTGAAAAGGAATTCTTTACGTCG 126282
||| | ||| || | || | |||||||||| ||||||| ||||||| || |||
Sbjct 30795 GAACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAGGAATTTTTGACGGAT 30736
Query 126283 GCGCTGCCATGCGATATGTTGGGAATGAATTCTACAGCGATGTGCGAATATATAGAGTTC 126342
|| || || | | | | || ||||||||| | ||||||| |||| || || |||
Sbjct 30735 GCTCTTCCCGTTGCTCTCATCGGCATGAATTCTGCTTTGATGTGCCAATACATCGAATTC 30676
Query 126343 GTAGCGGACCGT-------TTGCTCGTCGAATTACGACAACCGAAACACTTTAATACACC 126395
|| || || ||| |||||| | || || ||||| || || | |||
Sbjct 30675 GTTGCTGATCGTCTCATGGTTGCTCTTGGATTT--GACAA--GATTTACATGGCTAC--- 30623
Query 126396 CAATCCATTTAACTTTATGAACAATATTTCTCTCGAGGGAAAGACTAACTTTTTCGAGAG 126455
|||||||||| |||||||| ||| || ||||| | || ||||| ||||| || || |
Sbjct 30622 CAATCCATTTGACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAA 30563
Query 126456 ACGTGTCGGAGAGTATAAACG 126476
|||||| || ||| ||||
Sbjct 30562 GCGTGTCTCTGACTATCAACG 30542
>seq609
Length=32548
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || |||||||||||||| || ||||| || ||||| |||||||||||| | || ||
Sbjct 20868 GTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCAACAACGTCTCATTTTC 20927
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
||||| ||||| || || || | | | || ||||| |||||||||||||||||
Sbjct 20928 GCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAACATTCAAAAGGAATCT 20987
Query 24899 ACACTACACTTGGT 24912
|| || ||||||||
Sbjct 20988 ACCCTTCACTTGGT 21001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449892859204040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |