Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq809 91.5 1e-13 >seq809 Length=417114 Score = 91.5 bits (100), Expect = 1e-13 Identities = 197/290 (68%), Gaps = 6/290 (2%) Strand=Plus/Minus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 ||||| ||||| || | || | | || | ||||||||| ||||| || || || Sbjct 260637 TCAGTTTCCGGATTCTTGCACTTCTTGCAAAGTACAAACTTGGAAATGAATCCGTCCAGG 260578 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 |||||| | ||| || ||| |||| ||||||| ||| | || |||| | Sbjct 260577 TAGTCCTGGAGCTTTGGGGCGTCATGGGCACCGTTGATGATCCAGCGATCGTCAGTAGGC 260518 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAA-ATGGCCGG 34496 | | | | || || || ||||||||| | ||||| ||||| | |||| |||| || Sbjct 260517 TTGGCGTTCGCCTGAGCACCCAGCTCGAATCCGAAATACTTGATAACGTAAGATGGG-GG 260459 Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556 || | || | || ||||| | || |||||||| ||||||||||| |||||||| Sbjct 260458 CCGGCTGAGAGACTGGGCGACCGAGTTCAGGTTGACGACAACAGTCTTGATACCGTTGCC 260399 Query 34557 CTTTCCTTCGACCTTGG--CGCAGATGCGCGGCATTTTGTAGCGGTAGAA 34604 || ||||||| ||||| | || | | | ||| ||||| |||||||| Sbjct 260398 TTTACCTTCGATCTTGGACTGGAGCTTCTC--CATCTTGTAACGGTAGAA 260351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412837358439599