Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq728 145 1e-28 seq657 140 5e-27 seq820 111 2e-18 seq723 93.3 7e-13 seq744 91.5 2e-12 seq578 89.7 8e-12 seq830 86.0 1e-10 >seq728 Length=11653 Score = 145 bits (160), Expect = 1e-28 Identities = 179/242 (74%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||||||||| || |||||||||||| |||| ||||| || | | Sbjct 4484 TGTACTTGGTGACAGCCTTGGTACCTTCAGAGACGGCGTGCTTGGCGAGTTCACCAGGGA 4425 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| || || || ||||| ||||| || || | ||| ||| |||||||| || Sbjct 4424 GGATGAGACGAACAGCGGTTTGGATTTCACGAGAAGAGATGGTGGAACGCTTGTT-GTAA 4366 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || |||| | ||| || ||| | || || || | || || |||||||| |||||| Sbjct 4365 GCAGCCAACTTGGAGGCTTCAGTGGCAATACGTTCAAAGATATCATTGACAAAAGAGTTC 4306 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| ||||| | ||||||||||| || |||||||| || ||||| | |||||| Sbjct 4305 AAGATGGACATGGCCTTGTTGGAGATACCGGTATCGGGGTGGACTTGCTTCAAGACCTTG 4246 Query 1485709 TA 1485710 || Sbjct 4245 TA 4244 >seq657 Length=446211 Score = 140 bits (154), Expect = 5e-27 Identities = 182/252 (72%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| ||| Sbjct 211770 TGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGA 211829 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 ||||||| ||||| | ||| ||||| | | ||||| ||||| | || | Sbjct 211830 GCGAGATGTTGTCCATGAAGTCGAAGGGGTTTGTGGCGTTGTAGTACTTCTTGTTGCCAA 211889 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | || | |||||||||||||| ||||| || ||||||||||||||||| || ||||| Sbjct 211890 GAGAGACCAGCAGGCGGTCGGCAACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCA 211949 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 | || | ||| || ||||| || | || | | ||||| | ||| || |||||||| | Sbjct 211950 TACCAAGGAGGGCAACGGGGAGGGCGTCCGTCAGGAACTCCTGCTCAATGTCGACGGCAT 212009 Query 794131 CGATGATGATCT 794142 | | |||||||| Sbjct 212010 CAACGATGATCT 212021 Score = 98.7 bits (108), Expect = 2e-14 Identities = 151/213 (71%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| || || |||||||| |||| || || | |||||||| ||||||||| Sbjct 212479 GCCTCAGGGACCTGGACCTCGCCACTGAAACGCTCGACGAGGTTCTCGTTGACGATGCCG 212538 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGA-G 796268 || |||||||| || || ||||| || ||| |||| |||||||| | | ||| | Sbjct 212539 TCAGACGCGGCGAAGAAAGCCAGGACATGGGAGATGAAGTAGCGCTCGTCATTGTTGAGG 212598 Query 796269 CG--AGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 || | ||||| | | ||| | || |||| |||||| || ||||| ||||| Sbjct 212599 CGGTTGTTCCAGTCGTGCAGGTCCTTGGACAGATCGATCTCCTCAGCAGTCCAGAAGGAA 212658 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATCCGT 796359 ||||| ||||| |||||||||| ||| ||| || Sbjct 212659 GCCTCTGCCTTCTTGTACATCTGCCAGATCTGT 212691 Score = 87.8 bits (96), Expect = 3e-11 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 || ||||||| ||||||||||||||| || ||||| ||||| ||||||||||| || || Sbjct 212392 GGCTCCTTGATGTAGGTGTCGATGAGAAGGGAGTATGTCTCGGAGTGGATGTTCTCCATC 212451 Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666 ||||||||| || || ||||| Sbjct 212452 ATGATCTGGAAACCGTAGAAGCA 212474 >seq820 Length=255357 Score = 111 bits (122), Expect = 2e-18 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || |||||||||||||| ||||| | || ||||| | || |||||||| || |||||| Sbjct 231205 GCTGCCAACTACCTCGATATCAAAGCTCTTCTCGACGTCGGCTGCAAGACTGTTGCCAAC 231264 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | |||||||||||||| ||||| || || ||||||||||| |||||| || Sbjct 231265 ATGATCAAGGGCAAGTCTCCCGAAGAGATTCGCAAGACCTTCAACATCCAG 231315 >seq723 Length=18298 Score = 93.3 bits (102), Expect = 7e-13 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 2073547 ACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGACTCGCCG 2073606 ||| |||| || ||||| |||||||| | |||||| || | || ||| ||||| ||| Sbjct 6000 ACAAAGCGAGCAGTGTCATTAAAGACTCTGAGCATTGGAATAATGCCATTGGAGGTACCG 6059 Query 2073607 TTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCGATGCCG 2073666 || || || || | || | ||| ||| | || | ||| || || |||| ||| | ||| Sbjct 6060 TTTGTTCCTGCGATATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCG 6119 Query 2073667 CCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCGAT 2073722 || || | ||||||||| | || ||| | | | || ||||||||||| ||||| Sbjct 6120 CCAGCAGACTTGGAGATACGAGCACACGTGGTGATAGTATCGTAGATGCCTTCGAT 6175 >seq744 Length=38458 Score = 91.5 bits (100), Expect = 2e-12 Identities = 220/332 (66%), Gaps = 12/332 (4%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||| || |||| ||||||||| ||||| || | || ||||| | || || ||| Sbjct 30854 CCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAAACCACGTTTC 30913 Query 794401 TTGAGCCAAAAGATG---GCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCA 794457 ||||||||||| ||| ||| || || || ||||| || || || ||||| || ||| Sbjct 30914 TTGAGCCAAAAAATGGAAGCAAAGGAA---CCAGAGAAGAAAATACCTTCGACAGCAGCA 30970 Query 794458 AAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCC 794517 ||| | || || ||||| ||||||| || | | |||||||| | ||| Sbjct 30971 AAGGCAACAAGACGCTCAGCAAAAG------AACCGTTAGAGGAAATCCACTTGAAGGCC 31024 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577 || || |||||| | | | | || | ||||| || || |||||| || ||| Sbjct 31025 CAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCTTTC 31084 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 || || |||| || ||||| || | || ||| || |||| ||| || ||| Sbjct 31085 TCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATATTT 31144 Query 794638 TCGATGGCGATCTGGAAGCCATAAAAGCAGTT 794669 || || ||| || |||||||| || || || Sbjct 31145 TCAATCATGATTTGAAAGCCATAGAAACATTT 31176 >seq578 Length=440600 Score = 89.7 bits (98), Expect = 8e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 2071801 AGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGC 2071860 || ||||| ||||| ||||| || || | |||||| ||| || | | || || | Sbjct 115974 AGACCGGGAGCCTCATTTGGGCAGAATAGGGTCCAGTCACCGTTAGACTCAACACGCTTC 115915 Query 2071861 ATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTG 2071920 || || || ||| ||||| ||| | || ||||| || || || | | ||| ||||| Sbjct 115914 ATGAAGAGATCGGGAGTCCAGAGGGCATAGAAGAGGTCACGTGCTCTGACCTCTTCCTTA 115855 Query 2071921 CCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980 ||||||||||| ||||| | | || | || ||||| |||||| |||||||||||| Sbjct 115854 CCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCCAGGTAG 115795 Query 2071981 CAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 || || || || ||||||| ||||| Sbjct 115794 ATAGCGAAAGCACCAGGGCGCTTGTTCCCGCC 115763 >seq830 Length=527331 Score = 86.0 bits (94), Expect = 1e-10 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||| || || || || |||||| |||| ||||| ||| | | Sbjct 65367 GTACTTGGTGACAGCCTTGGTGCCTTCCGACACAGCGTGCTTGGCAAGTTCACCGGGGAG 65426 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||| || | ||| | |||||||||||| |||| Sbjct 65427 GATGAGCCTCACAGAGGTCTGGATCTCTCGGG 65458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916156726245077