Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq812 132 3e-26
seq810 113 3e-20
seq799 93.3 3e-14
>seq812
Length=913560
Score = 132 bits (146), Expect = 3e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||| ||||||| ||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 528995 CAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATC 529054
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || |||||||| ||||||||||| ||||||||||| | || | |||||||| ||
Sbjct 529055 CTCAAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGATACCCTCCTTATC 529114
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | || | ||| || || | ||| || ||
Sbjct 529115 CTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATAGT 529174
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || |||||||| || |||||||||||
Sbjct 529175 CTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 529207
Score = 109 bits (120), Expect = 4e-19
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | |||| ||||||||| ||||| ||||| || || |||| | ||
Sbjct 529224 AGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCGTCC 529283
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||| |||||||| || || |||||||| | || | |||||||||||
Sbjct 529284 TCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 529343
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || || |||||| || | ||| ||||||
Sbjct 529344 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTC 529403
Query 34946 TTTCCCGTGA 34955
||||| ||||
Sbjct 529404 TTTCCAGTGA 529413
>seq810
Length=1034423
Score = 113 bits (124), Expect = 3e-20
Identities = 134/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| || |||| |||| || || ||||||||||||||||
Sbjct 583011 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGA 582952
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
|||| || |||||||| | || | ||||||||||| | || || ||||||
Sbjct 582951 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 582892
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| |||| || | ||||||||| | ||| |||||||| ||||| |||||||| || |
Sbjct 582891 CGATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 582832
Query 34968 AG 34969
||
Sbjct 582831 AG 582830
>seq799
Length=343686
Score = 93.3 bits (102), Expect = 3e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||||| ||| ||||||||| ||||| |||||||| || |||| | ||
Sbjct 28780 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGACCGTCC 28839
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| || ||||||||||| || |||||||| | || | |||||||||||
Sbjct 28840 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTC 28898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325689453811817
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |