Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq205 214 1e-49 seq78 109 4e-18 seq723 107 1e-17 seq314 86.0 5e-11 seq245 86.0 5e-11 seq244 86.0 5e-11 seq157 86.0 5e-11 >seq205 Length=39400 Score = 214 bits (236), Expect = 1e-49 Identities = 653/1001 (65%), Gaps = 24/1001 (2%) Strand=Plus/Plus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 ||||| |||||||| | ||| || || ||||| |||||||| || || | | ||||| Sbjct 3598 ATACCGTTGGCATCAACATCGAAAGTAACTTCGATTTGAGGAACACCACGAGGGGCAGGA 3657 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 || || || | | || | || ||| || ||||| || || |||||| Sbjct 3658 GGAATACCAGTAAGTTCGAACTTACCGAGAAGGTTGTTATCCTTGGTACGAGCACGTTCA 3717 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 || ||| ||| |||||| || ||| ||| ||||| | || || | || | | | Sbjct 3718 CCTTCGTAAACTTGGATGAGGACACCAGGTTGGTTATCGGCGTAGGTAGAGAAGATTTCG 3777 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 || || || |||| || ||||| | | |||| | ||||| | ||||||||| Sbjct 3778 GACTTCTTGGTGGGAACAGTGGTGTTACGCTTGATAAGAGCAGTCATGACACCACCAGCG 3837 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 281740 ||||| | ||| || |||||||||| || || | || | || | ||| ||||| Sbjct 3838 GTTTCAATACCGAGGGAAAGAGGAGCAACGTCCAAAAGAAGAAGGTCTTGGGTCTTTTCG 3897 Query 281741 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 281800 ||| | |||| ||||| || ||||| | |||||||||||| ||||||||||||||| Sbjct 3898 GAAGTGTCACCAGAGAGAATGGCAGCTTGGACAGCAGCACCATAGGCAACAGCTTCATCA 3957 Query 281801 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACC 281860 || || | | | || ||| ||||| ||||| || | |||| | | | ||| Sbjct 3958 GGGTTGATGGACTTGTTGGGTTCCTTACCGTTGAAGAAGTCAGAAACCAACTTTTGAACC 4017 Query 281861 TTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGT 281920 || |||||||| | || || || || | ||||| || || || || || || || | Sbjct 4018 TTGGGAATACGGGTGGAACCACCGACGAGGACAATATCGTGAACTTGAGACTTGTCAATC 4077 Query 281921 TTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCT--GAAC 281978 || || || | || ||||| || ||||| | | | || | ||| | | Sbjct 4078 TTGGAGTCACGAAGGACCTTTTCGACAGGTTCCATGGTATTACGGAAGAGATCTTGGTTC 4137 Query 281979 AAAGTTCTTCGAATTTAGCTCTAGT--AAGA-GTGACATTATAA-TCAATTCCTTCGAAC 282034 || ||||||||| ||| | ||| |||| ||| || || |||| |||||||| Sbjct 4138 AA--TTCTTCGAAACGAGCACGAGTCAAAGAGGTG----TAGAAGTCAACACCTTCGAAG 4191 Query 282035 AAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCA 282094 | ||| || | ||| || || ||||||| | |||||| | | ||| |||||||||||| Sbjct 4192 AGAGAGTCGATTTCGATGGTGGTTTGAGCAGCAGAAGACAAGGTACGCTTAGCACGTTCA 4251 Query 282095 CATGCTGTCCTTAGTCTTCGTA-AG-----GCTTTTGCTGATTGATTCAAATCTGTTTTA 282148 || || || | || | || | || || || | || ||| || | || Sbjct 4252 CAAGCAGTACGAAGACGACGGACAGCACGAGCGTTACCAGA--GAT----GTCCTTCTTG 4305 Query 282149 TATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCT 282208 | || | |||||| |||| | | | |||||||| ||||| ||||||||||| Sbjct 4306 AACTTGCGCTTGAATTCTTGCATGAAGTGGTTGACAAGACGGTTATCGAAATCTTCACCA 4365 Query 282209 CCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAA 282268 ||||| | ||| | || | ||||| | |||| ||| | |||||||| | | ||| Sbjct 4366 CCCAAGTGAGTGTCACCAGCAGTAGCCTTGACTTCGAAGATACCATCTTCGATGGTCAAG 4425 Query 282269 AGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCT 282328 |||| ||||| ||| ||||| |||| ||| || || | || || ||| || Sbjct 4426 AGAGAGACATCGAAGGTACCACCTCCCAAATCGAAGATCAAAACGTTACGTTCACCTTCA 4485 Query 282329 TGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAA 282388 || || || | ||| || |||| ||| || ||||| ||||| || || || | | Sbjct 4486 ACCTTCTTGTCCAAACCGTAGGCAATAGCGGCGGCAGTGGGTTCGTTGATGATACGTTGA 4545 Query 282389 ACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 282429 || || | ||| ||||| || ||||| || ||||| || Sbjct 4546 ACGTTCAAACCGGCAATCAAACCAGCATCCTTGGTGGCCTG 4586 >seq78 Length=13793 Score = 109 bits (120), Expect = 4e-18 Identities = 361/549 (66%), Gaps = 17/549 (3%) Strand=Plus/Plus Query 281555 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 281614 |||||||| ||| | | ||| ||| || ||||| ||||| | | ||| || || Sbjct 8955 CGTTCACCTTCGTAGACAGGGAAAGTGACAGTGGTTTGGTTATCGGCAGCAGTGGTGAAG 9014 Query 281615 ACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCA 281674 || |||| |||| |||||| || | ||||| | || | | | ||| |||||| Sbjct 9015 ACCTTGGACTTTTGACAAGGGATAGGGGTGTTACGGGGAACGACAACAGCCATGATACCA 9074 Query 281675 CCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGT 281734 || |||| | |||||||||||||||| |||||| | | || | | |||| Sbjct 9075 CCTTGCATTTCAACACCAAGAGAAAGAGGAACGACATCCAACAAGAGGAGGTCTTGAGTC 9134 Query 281735 TTTTCAT---CAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 281791 ||||| | ||| ||| |||| ||| ||||||| ||||||||| || |||||| Sbjct 9135 TTTTCGTTACCAGCTTGGTTGGTGAGAACAGCGGCTTGAACAGCAGCACCGTAGGCAACA 9194 Query 281792 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAG 281850 |||||||||||||| | | | || | || || ||| || | || ||| | || | Sbjct 9195 GCTTCATCAGGATTGATGGACTTGTTCAATTCCTTGCCACCAAAGAGATCTTGGAGGAGG 9254 Query 281851 --TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGT 281908 ||| | ||| || ||||| | || || || || | || ||||| | || ||| Sbjct 9255 GATTG---GATCTTGGGGATACGGGTAGAACCACCGACAAGAACGATTTCGT-CA-ATGT 9309 Query 281909 GAT--TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGC-TCTA 281965 | || || | || | |||| || || ||| |||||||| | | | | | | Sbjct 9310 CCTTCTTGTCAACCTTGGCATCCTTCAAGACGCGTTCGACGGGTTCGATAGTACCGGCGA 9369 Query 281966 AACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAAT 282024 || || | || | |||||| || || || | ||| | || ||| || || || Sbjct 9370 AAGCAG-CAGAGTTGATTTCTTCAAACTTGGCACGAGTGA-TGTTGGATTGGAAGTCGAT 9427 Query 282025 TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTT 282084 |||||||| | ||| |||||||| | || ||||| ||| ||||||| | | ||| || Sbjct 9428 GCCTTCGAAGAGAGAGTCAACTTCGACAGTGGTTTGGGTCAAAGAAGACAAGGTACGCTT 9487 Query 282085 AGCACGTTC 282093 ||||||||| Sbjct 9488 AGCACGTTC 9496 >seq723 Length=18298 Score = 107 bits (118), Expect = 1e-17 Identities = 146/203 (72%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 164586 AAAGCTATTTACAGGACTGTTTGGGAAATTCCTCAAAAATCCATCATTGAAATGGCAGCT 164645 |||||||| ||| || || ||||| ||| | |||| | | || ||||| ||||| ||| Sbjct 4613 AAAGCTAT--ACAAAACAGTATGGGAGATTTCACAAAGAACTATTATTGACATGGCCGCT 4556 Query 164646 GATAGAGCACCTTTTGTTGATCAAACACAGAGTATGAATTTGTACATTGATAAACCTAGT 164705 ||||||| | ||||| | || ||| | || ||||||||||| | || |||| | Sbjct 4555 GATAGAGGAGCTTTTATCGACCAATCTCAATCTATGAATTTGTTTACTGCCGAACCAAAC 4496 Query 164706 TTTGCAAGATTAAATTCTTGTCTATTTTATGCATGGAGGAAAGGTCTCAAAACCGGTATG 164765 |||| | ||| | ||| | |||||||| |||| ||| || | || || || ||| Sbjct 4495 TTTGGCAAATTGACCTCTATGCACTTTTATGCCTGGAAGAAGGGATTAAAGACTGGCATG 4436 Query 164766 TATTATTTGAGATCTAAACCAGC 164788 || ||||||||||||| ||| || Sbjct 4435 TACTATTTGAGATCTAGACCTGC 4413 >seq314 Length=23708 Score = 86.0 bits (94), Expect = 5e-11 Identities = 181/264 (69%), Gaps = 11/264 (4%) Strand=Plus/Plus Query 519779 GCCTGTTTGTATGCAGGTATTAAAATTTCCGGAACTAATTTAGAAGTAGCTCCTGGACAA 519838 || || |||||||||||| | || ||||| || ||| ||||| ||||| || ||| Sbjct 18811 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 18870 Query 519839 CATGAATTTCAAATTGGTCC-TGTCGAAGGAATTGATGCAGCTGATCAATTATGGATAGC 519897 |||||||||| | ||||| ||| ||||| |||| | | ||||| | ||||| | Sbjct 18871 TTTGAATTTCAAGTAGGTCCATGT-GAAGGTATTGGTATGGGAGATCATCTTTGGATTTC 18929 Query 519898 CAGATTTATTTTGGAAAAGATTAGCGAACATTACGATCGCTAT-ATTGT---TTATCATC 519953 | | ||| |||||| || ||| | | | | ||| ||||| | ||||| Sbjct 18930 TCGTTATATCTTGGAACGTGTTTCAGAAGACT----TTGGTATCATTGTCTCTATTCATC 18985 Query 519954 CTAAACCTCTTCAAGGAGACTGGAATGGGTCTGGATGTCATACAAATTTTAGTACAGAAT 520013 |||| ||| | | || || ||||| || |||| ||||| ||||| ||| ||| ||| Sbjct 18986 CTAAGCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAG 19045 Query 520014 CAATGCGATCAGAAGGTGG-ATTG 520036 |||||| ||| ||||| |||| Sbjct 19046 AAATGCGTCAAGAGGGTGGTATTG 19069 >seq245 Length=22460 Score = 86.0 bits (94), Expect = 5e-11 Identities = 181/264 (69%), Gaps = 11/264 (4%) Strand=Plus/Minus Query 519779 GCCTGTTTGTATGCAGGTATTAAAATTTCCGGAACTAATTTAGAAGTAGCTCCTGGACAA 519838 || || |||||||||||| | || ||||| || ||| ||||| ||||| || ||| Sbjct 3650 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 3591 Query 519839 CATGAATTTCAAATTGGTCC-TGTCGAAGGAATTGATGCAGCTGATCAATTATGGATAGC 519897 |||||||||| | ||||| ||| ||||| |||| | | ||||| | ||||| | Sbjct 3590 TTTGAATTTCAAGTAGGTCCATGT-GAAGGTATTGGTATGGGAGATCATCTTTGGATTTC 3532 Query 519898 CAGATTTATTTTGGAAAAGATTAGCGAACATTACGATCGCTAT-ATTGT---TTATCATC 519953 | | ||| |||||| || ||| | | | | ||| ||||| | ||||| Sbjct 3531 TCGTTATATCTTGGAACGTGTTTCAGAAGACT----TTGGTATCATTGTCTCTATTCATC 3476 Query 519954 CTAAACCTCTTCAAGGAGACTGGAATGGGTCTGGATGTCATACAAATTTTAGTACAGAAT 520013 |||| ||| | | || || ||||| || |||| ||||| ||||| ||| ||| ||| Sbjct 3475 CTAAGCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAG 3416 Query 520014 CAATGCGATCAGAAGGTGG-ATTG 520036 |||||| ||| ||||| |||| Sbjct 3415 AAATGCGTCAAGAGGGTGGTATTG 3392 >seq244 Length=22460 Score = 86.0 bits (94), Expect = 5e-11 Identities = 181/264 (69%), Gaps = 11/264 (4%) Strand=Plus/Minus Query 519779 GCCTGTTTGTATGCAGGTATTAAAATTTCCGGAACTAATTTAGAAGTAGCTCCTGGACAA 519838 || || |||||||||||| | || ||||| || ||| ||||| ||||| || ||| Sbjct 3650 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 3591 Query 519839 CATGAATTTCAAATTGGTCC-TGTCGAAGGAATTGATGCAGCTGATCAATTATGGATAGC 519897 |||||||||| | ||||| ||| ||||| |||| | | ||||| | ||||| | Sbjct 3590 TTTGAATTTCAAGTAGGTCCATGT-GAAGGTATTGGTATGGGAGATCATCTTTGGATTTC 3532 Query 519898 CAGATTTATTTTGGAAAAGATTAGCGAACATTACGATCGCTAT-ATTGT---TTATCATC 519953 | | ||| |||||| || ||| | | | | ||| ||||| | ||||| Sbjct 3531 TCGTTATATCTTGGAACGTGTTTCAGAAGACT----TTGGTATCATTGTCTCTATTCATC 3476 Query 519954 CTAAACCTCTTCAAGGAGACTGGAATGGGTCTGGATGTCATACAAATTTTAGTACAGAAT 520013 |||| ||| | | || || ||||| || |||| ||||| ||||| ||| ||| ||| Sbjct 3475 CTAAGCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAG 3416 Query 520014 CAATGCGATCAGAAGGTGG-ATTG 520036 |||||| ||| ||||| |||| Sbjct 3415 AAATGCGTCAAGAGGGTGGTATTG 3392 >seq157 Length=40733 Score = 86.0 bits (94), Expect = 5e-11 Identities = 181/264 (69%), Gaps = 11/264 (4%) Strand=Plus/Minus Query 519779 GCCTGTTTGTATGCAGGTATTAAAATTTCCGGAACTAATTTAGAAGTAGCTCCTGGACAA 519838 || || |||||||||||| | || ||||| || ||| ||||| ||||| || ||| Sbjct 21923 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 21864 Query 519839 CATGAATTTCAAATTGGTCC-TGTCGAAGGAATTGATGCAGCTGATCAATTATGGATAGC 519897 |||||||||| | ||||| ||| ||||| |||| | | ||||| | ||||| | Sbjct 21863 TTTGAATTTCAAGTAGGTCCATGT-GAAGGTATTGGTATGGGAGATCATCTTTGGATTTC 21805 Query 519898 CAGATTTATTTTGGAAAAGATTAGCGAACATTACGATCGCTAT-ATTGT---TTATCATC 519953 | | ||| |||||| || ||| | | | | ||| ||||| | ||||| Sbjct 21804 TCGTTATATCTTGGAACGTGTTTCAGAAGACT----TTGGTATCATTGTCTCTATTCATC 21749 Query 519954 CTAAACCTCTTCAAGGAGACTGGAATGGGTCTGGATGTCATACAAATTTTAGTACAGAAT 520013 |||| ||| | | || || ||||| || |||| ||||| ||||| ||| ||| ||| Sbjct 21748 CTAAGCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAG 21689 Query 520014 CAATGCGATCAGAAGGTGG-ATTG 520036 |||||| ||| ||||| |||| Sbjct 21688 AAATGCGTCAAGAGGGTGGTATTG 21665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740589012262518