Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq205 214 1e-49
seq78 109 4e-18
seq723 107 1e-17
seq314 86.0 5e-11
seq245 86.0 5e-11
seq244 86.0 5e-11
seq157 86.0 5e-11
>seq205
Length=39400
Score = 214 bits (236), Expect = 1e-49
Identities = 653/1001 (65%), Gaps = 24/1001 (2%)
Strand=Plus/Plus
Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500
||||| |||||||| | ||| || || ||||| |||||||| || || | | |||||
Sbjct 3598 ATACCGTTGGCATCAACATCGAAAGTAACTTCGATTTGAGGAACACCACGAGGGGCAGGA 3657
Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560
|| || || | | || | || ||| || ||||| || || ||||||
Sbjct 3658 GGAATACCAGTAAGTTCGAACTTACCGAGAAGGTTGTTATCCTTGGTACGAGCACGTTCA 3717
Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620
|| ||| ||| |||||| || ||| ||| ||||| | || || | || | | |
Sbjct 3718 CCTTCGTAAACTTGGATGAGGACACCAGGTTGGTTATCGGCGTAGGTAGAGAAGATTTCG 3777
Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680
|| || || |||| || ||||| | | |||| | ||||| | |||||||||
Sbjct 3778 GACTTCTTGGTGGGAACAGTGGTGTTACGCTTGATAAGAGCAGTCATGACACCACCAGCG 3837
Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 281740
||||| | ||| || |||||||||| || || | || | || | ||| |||||
Sbjct 3838 GTTTCAATACCGAGGGAAAGAGGAGCAACGTCCAAAAGAAGAAGGTCTTGGGTCTTTTCG 3897
Query 281741 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 281800
||| | |||| ||||| || ||||| | |||||||||||| |||||||||||||||
Sbjct 3898 GAAGTGTCACCAGAGAGAATGGCAGCTTGGACAGCAGCACCATAGGCAACAGCTTCATCA 3957
Query 281801 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACC 281860
|| || | | | || ||| ||||| ||||| || | |||| | | | |||
Sbjct 3958 GGGTTGATGGACTTGTTGGGTTCCTTACCGTTGAAGAAGTCAGAAACCAACTTTTGAACC 4017
Query 281861 TTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGT 281920
|| |||||||| | || || || || | ||||| || || || || || || || |
Sbjct 4018 TTGGGAATACGGGTGGAACCACCGACGAGGACAATATCGTGAACTTGAGACTTGTCAATC 4077
Query 281921 TTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCT--GAAC 281978
|| || || | || ||||| || ||||| | | | || | ||| | |
Sbjct 4078 TTGGAGTCACGAAGGACCTTTTCGACAGGTTCCATGGTATTACGGAAGAGATCTTGGTTC 4137
Query 281979 AAAGTTCTTCGAATTTAGCTCTAGT--AAGA-GTGACATTATAA-TCAATTCCTTCGAAC 282034
|| ||||||||| ||| | ||| |||| ||| || || |||| ||||||||
Sbjct 4138 AA--TTCTTCGAAACGAGCACGAGTCAAAGAGGTG----TAGAAGTCAACACCTTCGAAG 4191
Query 282035 AAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCA 282094
| ||| || | ||| || || ||||||| | |||||| | | ||| ||||||||||||
Sbjct 4192 AGAGAGTCGATTTCGATGGTGGTTTGAGCAGCAGAAGACAAGGTACGCTTAGCACGTTCA 4251
Query 282095 CATGCTGTCCTTAGTCTTCGTA-AG-----GCTTTTGCTGATTGATTCAAATCTGTTTTA 282148
|| || || | || | || | || || || | || ||| || | ||
Sbjct 4252 CAAGCAGTACGAAGACGACGGACAGCACGAGCGTTACCAGA--GAT----GTCCTTCTTG 4305
Query 282149 TATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCT 282208
| || | |||||| |||| | | | |||||||| ||||| |||||||||||
Sbjct 4306 AACTTGCGCTTGAATTCTTGCATGAAGTGGTTGACAAGACGGTTATCGAAATCTTCACCA 4365
Query 282209 CCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAA 282268
||||| | ||| | || | ||||| | |||| ||| | |||||||| | | |||
Sbjct 4366 CCCAAGTGAGTGTCACCAGCAGTAGCCTTGACTTCGAAGATACCATCTTCGATGGTCAAG 4425
Query 282269 AGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCT 282328
|||| ||||| ||| ||||| |||| ||| || || | || || ||| ||
Sbjct 4426 AGAGAGACATCGAAGGTACCACCTCCCAAATCGAAGATCAAAACGTTACGTTCACCTTCA 4485
Query 282329 TGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAA 282388
|| || || | ||| || |||| ||| || ||||| ||||| || || || | |
Sbjct 4486 ACCTTCTTGTCCAAACCGTAGGCAATAGCGGCGGCAGTGGGTTCGTTGATGATACGTTGA 4545
Query 282389 ACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 282429
|| || | ||| ||||| || ||||| || ||||| ||
Sbjct 4546 ACGTTCAAACCGGCAATCAAACCAGCATCCTTGGTGGCCTG 4586
>seq78
Length=13793
Score = 109 bits (120), Expect = 4e-18
Identities = 361/549 (66%), Gaps = 17/549 (3%)
Strand=Plus/Plus
Query 281555 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 281614
|||||||| ||| | | ||| ||| || ||||| ||||| | | ||| || ||
Sbjct 8955 CGTTCACCTTCGTAGACAGGGAAAGTGACAGTGGTTTGGTTATCGGCAGCAGTGGTGAAG 9014
Query 281615 ACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCA 281674
|| |||| |||| |||||| || | ||||| | || | | | ||| ||||||
Sbjct 9015 ACCTTGGACTTTTGACAAGGGATAGGGGTGTTACGGGGAACGACAACAGCCATGATACCA 9074
Query 281675 CCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGT 281734
|| |||| | |||||||||||||||| |||||| | | || | | ||||
Sbjct 9075 CCTTGCATTTCAACACCAAGAGAAAGAGGAACGACATCCAACAAGAGGAGGTCTTGAGTC 9134
Query 281735 TTTTCAT---CAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 281791
||||| | ||| ||| |||| ||| ||||||| ||||||||| || ||||||
Sbjct 9135 TTTTCGTTACCAGCTTGGTTGGTGAGAACAGCGGCTTGAACAGCAGCACCGTAGGCAACA 9194
Query 281792 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAG 281850
|||||||||||||| | | | || | || || ||| || | || ||| | || |
Sbjct 9195 GCTTCATCAGGATTGATGGACTTGTTCAATTCCTTGCCACCAAAGAGATCTTGGAGGAGG 9254
Query 281851 --TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGT 281908
||| | ||| || ||||| | || || || || | || ||||| | || |||
Sbjct 9255 GATTG---GATCTTGGGGATACGGGTAGAACCACCGACAAGAACGATTTCGT-CA-ATGT 9309
Query 281909 GAT--TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGC-TCTA 281965
| || || | || | |||| || || ||| |||||||| | | | | | |
Sbjct 9310 CCTTCTTGTCAACCTTGGCATCCTTCAAGACGCGTTCGACGGGTTCGATAGTACCGGCGA 9369
Query 281966 AACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAAT 282024
|| || | || | |||||| || || || | ||| | || ||| || || ||
Sbjct 9370 AAGCAG-CAGAGTTGATTTCTTCAAACTTGGCACGAGTGA-TGTTGGATTGGAAGTCGAT 9427
Query 282025 TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTT 282084
|||||||| | ||| |||||||| | || ||||| ||| ||||||| | | ||| ||
Sbjct 9428 GCCTTCGAAGAGAGAGTCAACTTCGACAGTGGTTTGGGTCAAAGAAGACAAGGTACGCTT 9487
Query 282085 AGCACGTTC 282093
|||||||||
Sbjct 9488 AGCACGTTC 9496
>seq723
Length=18298
Score = 107 bits (118), Expect = 1e-17
Identities = 146/203 (72%), Gaps = 2/203 (1%)
Strand=Plus/Minus
Query 164586 AAAGCTATTTACAGGACTGTTTGGGAAATTCCTCAAAAATCCATCATTGAAATGGCAGCT 164645
|||||||| ||| || || ||||| ||| | |||| | | || ||||| ||||| |||
Sbjct 4613 AAAGCTAT--ACAAAACAGTATGGGAGATTTCACAAAGAACTATTATTGACATGGCCGCT 4556
Query 164646 GATAGAGCACCTTTTGTTGATCAAACACAGAGTATGAATTTGTACATTGATAAACCTAGT 164705
||||||| | ||||| | || ||| | || ||||||||||| | || |||| |
Sbjct 4555 GATAGAGGAGCTTTTATCGACCAATCTCAATCTATGAATTTGTTTACTGCCGAACCAAAC 4496
Query 164706 TTTGCAAGATTAAATTCTTGTCTATTTTATGCATGGAGGAAAGGTCTCAAAACCGGTATG 164765
|||| | ||| | ||| | |||||||| |||| ||| || | || || || |||
Sbjct 4495 TTTGGCAAATTGACCTCTATGCACTTTTATGCCTGGAAGAAGGGATTAAAGACTGGCATG 4436
Query 164766 TATTATTTGAGATCTAAACCAGC 164788
|| ||||||||||||| ||| ||
Sbjct 4435 TACTATTTGAGATCTAGACCTGC 4413
>seq314
Length=23708
Score = 86.0 bits (94), Expect = 5e-11
Identities = 181/264 (69%), Gaps = 11/264 (4%)
Strand=Plus/Plus
Query 519779 GCCTGTTTGTATGCAGGTATTAAAATTTCCGGAACTAATTTAGAAGTAGCTCCTGGACAA 519838
|| || |||||||||||| | || ||||| || ||| ||||| ||||| || |||
Sbjct 18811 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 18870
Query 519839 CATGAATTTCAAATTGGTCC-TGTCGAAGGAATTGATGCAGCTGATCAATTATGGATAGC 519897
|||||||||| | ||||| ||| ||||| |||| | | ||||| | ||||| |
Sbjct 18871 TTTGAATTTCAAGTAGGTCCATGT-GAAGGTATTGGTATGGGAGATCATCTTTGGATTTC 18929
Query 519898 CAGATTTATTTTGGAAAAGATTAGCGAACATTACGATCGCTAT-ATTGT---TTATCATC 519953
| | ||| |||||| || ||| | | | | ||| ||||| | |||||
Sbjct 18930 TCGTTATATCTTGGAACGTGTTTCAGAAGACT----TTGGTATCATTGTCTCTATTCATC 18985
Query 519954 CTAAACCTCTTCAAGGAGACTGGAATGGGTCTGGATGTCATACAAATTTTAGTACAGAAT 520013
|||| ||| | | || || ||||| || |||| ||||| ||||| ||| ||| |||
Sbjct 18986 CTAAGCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAG 19045
Query 520014 CAATGCGATCAGAAGGTGG-ATTG 520036
|||||| ||| ||||| ||||
Sbjct 19046 AAATGCGTCAAGAGGGTGGTATTG 19069
>seq245
Length=22460
Score = 86.0 bits (94), Expect = 5e-11
Identities = 181/264 (69%), Gaps = 11/264 (4%)
Strand=Plus/Minus
Query 519779 GCCTGTTTGTATGCAGGTATTAAAATTTCCGGAACTAATTTAGAAGTAGCTCCTGGACAA 519838
|| || |||||||||||| | || ||||| || ||| ||||| ||||| || |||
Sbjct 3650 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 3591
Query 519839 CATGAATTTCAAATTGGTCC-TGTCGAAGGAATTGATGCAGCTGATCAATTATGGATAGC 519897
|||||||||| | ||||| ||| ||||| |||| | | ||||| | ||||| |
Sbjct 3590 TTTGAATTTCAAGTAGGTCCATGT-GAAGGTATTGGTATGGGAGATCATCTTTGGATTTC 3532
Query 519898 CAGATTTATTTTGGAAAAGATTAGCGAACATTACGATCGCTAT-ATTGT---TTATCATC 519953
| | ||| |||||| || ||| | | | | ||| ||||| | |||||
Sbjct 3531 TCGTTATATCTTGGAACGTGTTTCAGAAGACT----TTGGTATCATTGTCTCTATTCATC 3476
Query 519954 CTAAACCTCTTCAAGGAGACTGGAATGGGTCTGGATGTCATACAAATTTTAGTACAGAAT 520013
|||| ||| | | || || ||||| || |||| ||||| ||||| ||| ||| |||
Sbjct 3475 CTAAGCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAG 3416
Query 520014 CAATGCGATCAGAAGGTGG-ATTG 520036
|||||| ||| ||||| ||||
Sbjct 3415 AAATGCGTCAAGAGGGTGGTATTG 3392
>seq244
Length=22460
Score = 86.0 bits (94), Expect = 5e-11
Identities = 181/264 (69%), Gaps = 11/264 (4%)
Strand=Plus/Minus
Query 519779 GCCTGTTTGTATGCAGGTATTAAAATTTCCGGAACTAATTTAGAAGTAGCTCCTGGACAA 519838
|| || |||||||||||| | || ||||| || ||| ||||| ||||| || |||
Sbjct 3650 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 3591
Query 519839 CATGAATTTCAAATTGGTCC-TGTCGAAGGAATTGATGCAGCTGATCAATTATGGATAGC 519897
|||||||||| | ||||| ||| ||||| |||| | | ||||| | ||||| |
Sbjct 3590 TTTGAATTTCAAGTAGGTCCATGT-GAAGGTATTGGTATGGGAGATCATCTTTGGATTTC 3532
Query 519898 CAGATTTATTTTGGAAAAGATTAGCGAACATTACGATCGCTAT-ATTGT---TTATCATC 519953
| | ||| |||||| || ||| | | | | ||| ||||| | |||||
Sbjct 3531 TCGTTATATCTTGGAACGTGTTTCAGAAGACT----TTGGTATCATTGTCTCTATTCATC 3476
Query 519954 CTAAACCTCTTCAAGGAGACTGGAATGGGTCTGGATGTCATACAAATTTTAGTACAGAAT 520013
|||| ||| | | || || ||||| || |||| ||||| ||||| ||| ||| |||
Sbjct 3475 CTAAGCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAG 3416
Query 520014 CAATGCGATCAGAAGGTGG-ATTG 520036
|||||| ||| ||||| ||||
Sbjct 3415 AAATGCGTCAAGAGGGTGGTATTG 3392
>seq157
Length=40733
Score = 86.0 bits (94), Expect = 5e-11
Identities = 181/264 (69%), Gaps = 11/264 (4%)
Strand=Plus/Minus
Query 519779 GCCTGTTTGTATGCAGGTATTAAAATTTCCGGAACTAATTTAGAAGTAGCTCCTGGACAA 519838
|| || |||||||||||| | || ||||| || ||| ||||| ||||| || |||
Sbjct 21923 GCTTGCTTGTATGCAGGTGTCAACATTTCAGGTGTCAATGCTGAAGTGGCTCCAGGTCAA 21864
Query 519839 CATGAATTTCAAATTGGTCC-TGTCGAAGGAATTGATGCAGCTGATCAATTATGGATAGC 519897
|||||||||| | ||||| ||| ||||| |||| | | ||||| | ||||| |
Sbjct 21863 TTTGAATTTCAAGTAGGTCCATGT-GAAGGTATTGGTATGGGAGATCATCTTTGGATTTC 21805
Query 519898 CAGATTTATTTTGGAAAAGATTAGCGAACATTACGATCGCTAT-ATTGT---TTATCATC 519953
| | ||| |||||| || ||| | | | | ||| ||||| | |||||
Sbjct 21804 TCGTTATATCTTGGAACGTGTTTCAGAAGACT----TTGGTATCATTGTCTCTATTCATC 21749
Query 519954 CTAAACCTCTTCAAGGAGACTGGAATGGGTCTGGATGTCATACAAATTTTAGTACAGAAT 520013
|||| ||| | | || || ||||| || |||| ||||| ||||| ||| ||| |||
Sbjct 21748 CTAAGCCTATCAAGGGTGATTGGAACGGCGCTGGTTGTCACACAAACTTTTCTACTGAAG 21689
Query 520014 CAATGCGATCAGAAGGTGG-ATTG 520036
|||||| ||| ||||| ||||
Sbjct 21688 AAATGCGTCAAGAGGGTGGTATTG 21665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740589012262518
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |