Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq578 131 4e-25 seq744 122 2e-22 seq723 116 9e-21 seq703 87.8 4e-12 seq475 87.8 4e-12 >seq578 Length=440600 Score = 131 bits (144), Expect = 4e-25 Identities = 447/691 (65%), Gaps = 7/691 (1%) Strand=Plus/Plus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 || || || ||||| ||||| ||||| | ||| | || || ||||||| || | | Sbjct 115331 TACTTCGGATTCAAGACTCTGGAACGATCGTATCTGCTCCGCATCAATGGAAAGGTTGCT 115390 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 || |||||||| |||||| || | ||||||||| | || || || || |||| | | Sbjct 115391 GAGCGTCCTCAGCACATGATTATGCGTGTTGCGGTCGGAATCCACGGTGATGACCTCGAG 115450 Query 110424 GCTGTTATTGAATGTTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTAC 110482 ||||| || || || | || | ||| | | | ||| || | || || Sbjct 115451 AAGGTTATCGAGACCTACAATCTGATGTCCCAGAAATACTTC-ACTCACGCCTCGCCGAC 115509 Query 110483 CCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAA 110542 || || ||||| || ||| | || |||| || ||||| ||| | | || || Sbjct 115510 TCTGTTCAACGCCGGTACTCCTCAGCCGCAGCTGGCCTCCTGCTTCCTTATCGATATGAA 115569 Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAAA 110601 || || ||||| ||||| ||||| | ||| |||| ||| | || || || | Sbjct 115570 GGAGGACAGCATTGAGGGTATCTATGACAC-CTTGAAGACTTGTGCCATGATCTCCAAGA 115628 Query 110602 ACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA 110661 | || || |||||| | |||| || ||| || | | ||| | | |||| Sbjct 115629 CTGCGGGTGGTATTGGTCTCAACGTCCACCGTATCCGTGCTACAGGTTCTTACATCGGTG 115688 Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721 | || || |||| | || ||||| || ||| | |||| |||||| ||||||||| Sbjct 115689 GTACTAACGGAACTTCCAACGGGCTTGTCCCTATGCTTCGAGTGTTCAACAACACTGCAA 115748 Query 110722 AATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTT 110778 ||| || | || || || || | | ||| | || |||||||| || || || | Sbjct 115749 GATACGTTGACCAGGGCGGGAACAAGCGCCCTGGTGCTTTCGCTATCTACCTGGAGCCCT 115808 Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838 |||| || || || ||||| ||||| || ||||| || || || || ||||| | Sbjct 115809 GGCACTCCGACATCTTTGAGTTCTTGGACCTTCGCAAGAACCACGGTAAGGAAGAGGTCA 115868 Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898 |||||||||| | || ||||| | |||| | | ||| | |||||||| |||||| | Sbjct 115869 GAGCACGTGACCTCTTCTATGCCCTCTGGACTCCCGATCTCTTCATGAAGCGTGTTGAGT 115928 Query 110899 AAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATG 110958 || || ||| | || | || || || |||| ||||| |||||||| |||| Sbjct 115929 CTAACGGTGACTGGACCCTATTCTGCCCAAATGAGGCTCCCGGTCTTTCTGATGTCTATG 115988 Query 110959 GAAAAGAGTTTGAAGACCTTTACGAAAAATA 110989 | | |||||||| | || ||| | || || Sbjct 115989 GCGATGAGTTTGAGGCTCTGTACCACAAGTA 116019 >seq744 Length=38458 Score = 122 bits (134), Expect = 2e-22 Identities = 355/546 (65%), Gaps = 12/546 (2%) Strand=Plus/Minus Query 131468 TATAAGAAATCTGTTGCGGCCTTCTGGACTGTTGAAGAGATCGATATGACCAAAGATATT 131527 ||||||||| ||| || |||| ||||| | |||||| |||||| ||| ||| || || Sbjct 31374 TATAAGAAAGCTGAAGCTTCCTTTTGGACAGCTGAAGAAATCGATTTGAGCAAGGACCTT 31315 Query 131528 GATGATTGGGAAAAATTAACCTTGAATGAAAAAGAT------TTTGTTTCCAAAGTTCTT 131581 ||||||||||||| | ||| ||||| || ||| | || || | Sbjct 31314 CATGATTGGGAAAACAAGA---TGACCGAAAACGAACGCTTCTTTATCTCTCGCGTCTTA 31258 Query 131582 GCATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTGTTATTAATTTCATTCAA 131641 || ||||| || || ||||||||||||| |||||| | ||| || || | | Sbjct 31257 GCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAACTTTTGTGAT 31198 Query 131642 GAAATTGATATTCCTGAAGTAACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATT 131701 ||| | | |||||||||| | || ||||| |||||| | ||||| |||| Sbjct 31197 GAAGTCAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATGATTGAAAATATT 31138 Query 131702 CATAGCGAGATGTATTCATTATTGATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAAT 131761 || || | || | |||||||| | | | | ||| || | | || ||| | Sbjct 31137 CACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGATAACCAAGAGAAAGAA 31078 Query 131762 AAATTATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATT 131821 | | ||| |||| | | | | ||| || |||| || || || ||||| | Sbjct 31077 ATGCTCTTTTCTGCTATTGACACTATCCCTTGTATCAAAAGAAAGGCTGATTGGGCCTTC 31018 Query 131822 AAATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTT 131881 || |||||| | | || | |||| || | ||||| || |||||| ||| Sbjct 31017 AAGTGGATTTCCTCTAA---CGGTTCTTTTGCTGAGCGTCTTGTTGCCTTTGCTGCTGTC 30961 Query 131882 GAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTG 131941 |||||||| ||||| || ||| | || | | || |||||||| ||||| ||||| ||| Sbjct 30960 GAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCCATTTTTTGGCTCAAGAAACGTGGTTTG 30901 Query 131942 ATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAA 132001 |||||||| | |||| |||| |||| |||| | ||||||| | |||||||| Sbjct 30900 ATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGCCTTCATACTGAC 30841 Query 132002 TTTGCT 132007 |||||| Sbjct 30840 TTTGCT 30835 >seq723 Length=18298 Score = 116 bits (128), Expect = 9e-21 Identities = 343/522 (66%), Gaps = 15/522 (3%) Strand=Plus/Minus Query 110294 TGATATTGACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGG 110353 |||| || ||| ||||| || ||||| | |||||| ||| || | ||||| Sbjct 6434 TGATTTTAACTTCTTTGGCTTTAAAACGTTAGAACGTAGTTACTTGTTAAAGATCAATAA 6375 Query 110354 CGAGATCATTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACA 110413 ||| ||| ||||||| |||||| ||||| | | |||||||| ||||| ||||| || | Sbjct 6374 CGAAATCGTTGAACGACCTCAATACATGATCATGCGTGTTGCTATTGGCATTCACGGTAA 6315 Query 110414 TGATATT-AAAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTAT--TCA 110470 ||| | ||||| | ||| | ||||| | || || | || || | ||| Sbjct 6314 TGACCTAGAAAGCGCCTTCAGAACCT-ATGATCT--TATGTCATCTAAATACTTTACTCA 6258 Query 110471 TGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCT 110530 |||||| ||||| | || ||||| || || | | |||||| || |||||| || Sbjct 6257 TGCTACACCTACATTGTTCAACGCTGGTACACCTAAACCTCAATTGTCTAGTTGCTTCCT 6198 Query 110531 TCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCT 110590 | | ||| || || || ||| ||||| || || ||| || | | ||||| Sbjct 6197 TGTTCAAATGAAAGAGGACAGTATCGAAGGCATCTACGATACTATCACCACGTGTGCTCG 6138 Query 110591 TATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCG---CTCAAAAGG 110647 ||| || || |||| || |||| || | ||| | ||||| ||| || Sbjct 6137 TATCTCCAAGTCTGCTGGCGGTGTTGGCGTTGCTGCTCAAAAGATTCGTGGCTCT---GG 6081 Query 110648 AGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTT 110707 | |||||||| | | || ||| | || | ||| || |||||||| | |||||||| Sbjct 6080 CTCTTATATCGCAGGAACAAACGGTACCTCCAATGGCATTATTCCAATGCTCAGAGTCTT 6021 Query 110708 CAACGACACTGCAAAATATGTGAATCAAGG---TGGTAAGAGAAATGGCTCATTTGCTAT 110764 || |||||||| | ||||| ||||| |||||| | || || |||||| | Sbjct 6020 TAATGACACTGCTCGCTTTGTGACACAAGGAGGTGGTAAACGCAACGGTAACTTTGCTGT 5961 Query 110765 CTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGA 110806 |||| | |||||||||||| || |||| |||||||| || Sbjct 5960 CTATATAGAACCTTGGCATGTCGACGTATTCGAATTCTTGGA 5919 >seq703 Length=34856 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 148318 ACCCTATCTGGGGATCGAACCCAGAATCTTCCGCTTAGAAGGCGGACGCGATATCCAATT 148377 |||| || |||| |||||||| ||||||||||||||||||||||||| ||||||||| Sbjct 19354 ACCCAATGCGGGGGTCGAACCCGCAATCTTCCGCTTAGAAGGCGGACGCCGTATCCAATT 19413 Query 148378 TCGCCAATAGGGC 148390 | |||||| |||| Sbjct 19414 TGGCCAATCGGGC 19426 >seq475 Length=36660 Score = 87.8 bits (96), Expect = 4e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 72169 ACTTTGCCAAACACAACGTGTTTGTTATTTAAATGTGGTTGAGGTGCAAGTGTAATGAAG 72228 ||||| |||||||| || || ||| || |||||||| ||| || |||||| ||| Sbjct 10296 ACTTTACCAAACACGACATGCTTGCCATCCAAATGTGGAGTAGGAACAGTTGTAATAAAG 10355 Query 72229 AATTGCGAGTTATTTGAATCAGGACCCGAGTTAGCCATAGAAACCAAACCTGCTTCTGAA 72288 ||||| || ||||| |||| || | ||| ||||| || | || || || Sbjct 10356 AATTGAGATCCATTTGTTCCAGGGCCAGCGTTTGCCATGGATAATAAGAATGGTTTGTCG 10415 Query 72289 TGCTTTAATAAGAAATTCTCATCTTCAAAAGTTTCTCCATATATACTTTGACCTGAGCTT 72348 ||||||||| || || ||||||||||| |||| ||||| ||| || ||| | Sbjct 10416 TGCTTTAATTCAAAGTTTTCATCTTCAAACTTTTCACCATAAATAGATTCACCGCCAGTA 10475 Query 72349 CCATCAAAGTTCACAATATCACCTCCTTGAACCATAAAATT 72389 || | | | || |||||| ||||||||||||||||| Sbjct 10476 CCGTTACCGGCTGTAAAATCACCACCTTGAACCATAAAATT 10516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186799981309123