Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq812 123 6e-23
>seq812
Length=913560
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || || || ||| ||||||| ||| || ||
Sbjct 528976 CAGATTTTCGTCAAGACTCTGACCGGCAAGACTATTACTCTGGAAGTCGAATCGTCAGAT 528917
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| ||||| |||||||| || || ||| ||
Sbjct 528916 ACCATCGATAACGTCAAGAGCAAGATCCAAGATAAAGAAGGCATCCCTCCCGACCAGCAG 528857
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| |||||||| || || ||||||||||||||||| | || ||| ||||||||||| |
Sbjct 528856 CGTCTTATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGCACCTTGTCCGATTACAACATT 528797
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||||||||| ||||||||
Sbjct 528796 CAGAAGGAGTCTACTCTCCACCTTGT 528771
Score = 91.5 bits (100), Expect = 3e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || || || ||||| ||||| || ||| |||
Sbjct 528748 CAGATTTTTGTTAAGACTTTGACTGGCAAGACTATCACATTGGAGGTTGAATCCAGCGAC 528689
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| | || || ||| ||||||||||| || ||||| || || ||| ||
Sbjct 528688 ACAATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAGCAG 528629
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| || || |||||| |||| || || | || ||| |||| |||||| ||
Sbjct 528628 CGCCTGATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGTACCTTGTCCGACTACAACATC 528569
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| || ||||| || ||||| ||| || |||| ||
Sbjct 528568 CAGAAGGAATCTACCCTGCACCTGGTTCTGCGACTCCG 528531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181808035227403
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |