Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq812 102 8e-17 seq609 98.7 9e-16 >seq812 Length=913560 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || ||||||||||| ||| || ||| || |||||| | ||| ||||| | | Sbjct 528786 GACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCTTCCAACTGCTTACCAGCA 528845 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || || ||||| |||||||||||||| || || || | Sbjct 528846 AAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTGGATCTTGCTCTTGACG 528905 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | || || ||||| | || | || || || |||||||| || Sbjct 528906 TTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGTCTTGCCGGTCAGAGTCTTG 528965 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 528966 ACGAAAATCTGCAT 528979 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| ||||| || | | | || || || || |||||||||||| || |||||| Sbjct 528537 CGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCG 528596 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || ||||| ||||| | | |||| || ||||| || || ||||| || ||||| || Sbjct 528597 TCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACCTTCCTTG 528656 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || |||| | || | || ||| | | || || || | || | Sbjct 528657 TCTTGAATCTTGCTCTTCACGTTGTCAATTGTGTCGCTGGATTCAACCTCCAATGTGATA 528716 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || ||||||| ||| || | ||||||||||| Sbjct 528717 GTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751 >seq609 Length=32548 Score = 98.7 bits (108), Expect = 9e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | | || || |||||||||||||| || |||| |||||| ||||| Sbjct 21002 AACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTC 20943 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| |||||||||| | || ||||| |||||||| ||||| || ||||| ||||| Sbjct 20942 GAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATC 20886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476606177709480