Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq812 102 8e-17
seq609 98.7 9e-16
>seq812
Length=913560
Score = 102 bits (112), Expect = 8e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || ||||||||||| ||| || ||| || |||||| | ||| ||||| | |
Sbjct 528786 GACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCTTCCAACTGCTTACCAGCA 528845
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| || || ||||| |||||||||||||| || || || |
Sbjct 528846 AAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTGGATCTTGCTCTTGACG 528905
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||||| | || || ||||| | || | || || || |||||||| ||
Sbjct 528906 TTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGTCTTGCCGGTCAGAGTCTTG 528965
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 528966 ACGAAAATCTGCAT 528979
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| ||||| || | | | || || || || |||||||||||| || ||||||
Sbjct 528537 CGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCG 528596
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| || ||||| ||||| | | |||| || ||||| || || ||||| || ||||| ||
Sbjct 528597 TCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACCTTCCTTG 528656
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || |||| | || | || ||| | | || || || | || |
Sbjct 528657 TCTTGAATCTTGCTCTTCACGTTGTCAATTGTGTCGCTGGATTCAACCTCCAATGTGATA 528716
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || ||||||| ||| || | |||||||||||
Sbjct 528717 GTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751
>seq609
Length=32548
Score = 98.7 bits (108), Expect = 9e-16
Identities = 92/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973
|||||| || | | | || || |||||||||||||| || |||| |||||| |||||
Sbjct 21002 AACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTC 20943
Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030
||| |||||||||| | || ||||| |||||||| ||||| || ||||| |||||
Sbjct 20942 GAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATC 20886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476606177709480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |