Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq723 100 3e-16 seq609 93.3 4e-14 >seq723 Length=18298 Score = 100 bits (110), Expect = 3e-16 Identities = 157/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 136650 GATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTTAAACCCTTCTC 136709 ||||| || | |||||| ||| ||||| |||||||||||| |||||||| ||||||| Sbjct 4400 GATTGCATCAACTGCAGGTCTAGATCTCAAATAGTACATGCCAGTCTTTAATCCCTTCTT 4459 Query 136710 CCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCCACGAAAAGATT 136769 ||||| |||| || ||||| | ||| | | || | || ||||| || | ||| Sbjct 4460 CCAGGCATAAAAGTGCATAGAGGTCAATTTGCCAAAGTTTGGTTCGGCAGTAAACAAATT 4519 Query 136770 TAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTCAATAGTACTT- 136828 | ||||| || ||||| ||| ||| | || ||||||||| |||||| || || Sbjct 4520 CATAGATTGAGATTGGTCGATAAAAGCTCCTCTATCAGCGGCCATG-TCAATAATAGTTC 4578 Query 136829 TTTGCTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACAT 136870 |||| ||| ||||| | ||||| | |||| |||| || Sbjct 4579 TTTGTGAAATCTCCCATACTGTTTTGTATAGCTTTTTGAGAT 4620 >seq609 Length=32548 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25250 GTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTAC 25309 || || ||||| || ||||| || ||||| || || ||||| ||| | ||||||| | Sbjct 20868 GTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCAACAACGTCTCATTTTC 20927 Query 25310 GGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCC 25369 | ||| |||||||||||||| | | | | | || |||||||| |||||||| ||||| Sbjct 20928 GCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAACATTCAAAAGGAATCT 20987 Query 25370 ACCATTCATTTAGT 25383 ||| |||| || || Sbjct 20988 ACCCTTCACTTGGT 21001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445089709817760