Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq657 147 3e-29 seq728 113 6e-19 seq578 91.5 2e-12 seq556 86.0 9e-11 >seq657 Length=446211 Score = 147 bits (162), Expect = 3e-29 Identities = 215/299 (72%), Gaps = 5/299 (2%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||| ||||| ||||| ||||| || |||||| |||| | Sbjct 212688 GATCTGGCAGATGTAC-AAGAAGGCAGAGGCTTCCTTCTGGACTGCTGAGGAGATCGATC 212630 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 | | ||| | | ||||| ||| | | | | ||||||||| | |||||| Sbjct 212629 TGTCCAAGGACCTGCACGACTGGAACAACCGCCTCAACAATGACGAGCGCTACTTCATCT 212570 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 || ||||| || ||| |||||||| || |||||||| ||||||||| | || Sbjct 212569 CCCATGTCCTGGC-TTTCTTCGCCGCGTCTGACGGCATCGTCAACGAGAACCTCGTCGAG 212511 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || | |||||||| | || ||||| |||| || ||||| ||||||||| Sbjct 212510 CGTTTCAGTGGCGAGGTCCAGGTCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATCATG 212451 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 || || ||||||||||| || || ||||| || || |||||||||||| ||||||| || Sbjct 212450 ATGGAGAACATCCACTCCGAGACATACTCCCTTCTCATCGACACCTACATCAAGGAGCC 212392 Score = 129 bits (142), Expect = 8e-24 Identities = 190/264 (72%), Gaps = 4/264 (2%) Strand=Plus/Minus Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577 || |||||||||| || |||||||| || ||| | ||||| | | || | || || | Sbjct 212024 AGAAGATCATCGTTGATGCCGTCGACATTGAGCAGGAGTTCCTGACGGACGCCCTCCCCG 211965 Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637 | || ||| | || |||||| ||| |||||||||||||||||| || || || ||||| Sbjct 211964 TTGCCCTCCTTGGTATGAACTCCAA-GCTCATGTGCCAGTACATCGAGTTC-GTTGCCGA 211907 Query 1456638 CCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCAT 1456697 ||||||||| | | || ||| | ||||| ||||| | | ||||| ||| | Sbjct 211906 CCGCCTGCTGGTCTCTCTTGGCAACA-AGAAGTACTACAACGCCACAAACCCCTTCGACT 211848 Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGT 1456756 ||||| |||||||||| |||||||||||||| |||||| || || || || | Sbjct 211847 TCATGGACAACATCTCGCTCGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACT 211788 Query 1456757 ACGCCAAGGCCGGCGTCACCGCCA 1456780 || |||||||| |||| |||| Sbjct 211787 ACCAGAAGGCCGGTGTCATGGCCA 211764 Score = 93.3 bits (102), Expect = 6e-13 Identities = 118/158 (75%), Gaps = 11/158 (7%) Strand=Plus/Minus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAA---CAAGGAGGGCCTCGACACTTT-GCC 1456178 || |||||||||||||| || |||||| | ||||||| || |||||| ||| Sbjct 212280 AAGAAGGCCGACTGGGCCATTCGCTGGATCCAGGACAAGGAG----TC--CACTTTCGCC 212227 Query 1456179 GAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCC 1456237 |||| | || | ||| || || || ||||| ||||| ||||| ||| |||| | | Sbjct 212226 CAGCGCTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCT 212167 Query 1456238 ATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||| ||||| |||||||| ||||||||||| ||||| Sbjct 212166 ATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCTGGTCT 212129 >seq728 Length=11653 Score = 113 bits (124), Expect = 6e-19 Identities = 172/244 (70%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | ||||||||||| | ||||| || |||||| |||| | ||| Sbjct 4229 TACTCCTCTTACATCTACAAGGTCTTGAAGCAAGTCCACCCCGATACCGGT-----ATC- 4282 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| ||| ||||||| |||||||| || || | || || || | | Sbjct 4283 TCCAACAAGGCCATGTCCATCTTGAACTCTTTTGTCAATGATATCTTTGAACGTATTGCC 4342 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 || || ||| |||| | ||||||||| ||| ||| | || || ||| Sbjct 4343 ACTGAAGCCTCCAAGTTGGCTGCTTACAACAAGCGTTCCACCATCTCTTCTCGTGAAATC 4402 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 || ||||| || || || ||| | | || ||||| |||| |||||||||||| || || Sbjct 4403 CAAACCGCTGTTCGTCTCATCCTCCCTGGTGAACTCGCCAAGCACGCCGTCTCTGAAGGT 4462 Query 725139 ACCA 725142 |||| Sbjct 4463 ACCA 4466 >seq578 Length=440600 Score = 91.5 bits (100), Expect = 2e-12 Identities = 197/292 (67%), Gaps = 2/292 (1%) Strand=Plus/Plus Query 259895 ATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953 ||||| ||| | | ||||| ||| || |||| || || || || ||||| || || | Sbjct 115475 ATGTCCCAGAAATACTTCAC-TCACGCCTCGCCGACTCTGTTCAACGCCGGTACTCCTCA 115533 Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013 |||||| | || ||||| || | || ||||||| || || ||||| ||||| Sbjct 115534 GCCGCAGCTGGCCTCCTGCTTCCTTATCGATATGAAGGAGGACAGCATTGAGGGTATCTA 115593 Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073 |||||| | ||| || || | ||||||||| | || || || || ||| | || Sbjct 115594 TGACACCTTGAAGACTTGTGCCATGATCTCCAAGACTGCGGGTGGTATTGGTCTCAACGT 115653 Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133 ||| | || || | || | ||| | | || || ||||| |||||||| || Sbjct 115654 CCACCGTATCCGTGCTACAGGTTCTTACATCGGTGGTACTAACGGAACTTCCAACGGGCT 115713 Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185 ||| || |||||||| || || ||| |||| || | ||||| |||||| || Sbjct 115714 TGTCCCTATGCTTCGAGTGTTCAACAACACTGCAAGATACGTTGACCAGGGC 115765 >seq556 Length=401636 Score = 86.0 bits (94), Expect = 9e-11 Identities = 130/183 (71%), Gaps = 3/183 (2%) Strand=Plus/Plus Query 165448 TGGTCGTCGTCGGTCCGTGTTCGGCACACGACCCGGACGCCGTTGTCGAGTATGGTCGGC 165507 ||||| |||| || || || || |||||||| || ||| ||||||||| | | | Sbjct 29151 TGGTCATCGTTGGACCATGCTCCATTCACGACCCAGAGACCGCCCTCGAGTATGCTGGTC 29210 Query 165508 GGTTGCGCGCCCTCGTACGGGCCGAGGTCGACGACGCCCTTTGTGTGGTCATGCGCGCCT 165567 || | |||||| | | | | |||| | | ||| || | |||||||||||| Sbjct 29211 GGCTAAAGGCCCTC-TCTGAGAAGCTCTCGAAG--GACCTCTGCATCATCATGCGCGCCT 29267 Query 165568 ATGTCGAAAAGCCGCGCACGACCGTTGGATGGAAGGGCCTGGCCAGTGACCCCGATCTTG 165627 | |||| ||||| |||||||||||||| |||||||| ||| || |||||||| ||| Sbjct 29268 ACCTCGAGAAGCCCCGCACGACCGTTGGCTGGAAGGGTCTGATCAACGACCCCGACATTG 29327 Query 165628 ATG 165630 ||| Sbjct 29328 ATG 29330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177729891100566