Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq812 136 4e-27 seq810 107 2e-18 seq609 98.7 1e-15 seq723 84.2 2e-11 seq799 82.4 8e-11 >seq812 Length=913560 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 ||||| || | |||||||| || ||||| || || |||||||| || |||||||||||| Sbjct 528522 TTTCCACCACGGAGTCGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCG 528581 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | ||| || ||| || ||||| || || ||||| |||| |||||||| || || Sbjct 528582 GACAAGGTACGACCGTCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGA 528641 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || ||||| || |||||||| || || || ||| | ||||||| ||||| Sbjct 528642 GGGATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATTGTGTCGCTGGATTCA 528701 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || || || || || ||||| ||||| ||||| ||||| Sbjct 528702 ACCTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751 Score = 129 bits (142), Expect = 6e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || ||||| ||||||||||| ||| | |||| | || || Sbjct 528771 ACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCTTCC 528830 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 | ||| || || ||||| || | ||||||||| ||||| || ||||||||||| ||||| Sbjct 528831 AACTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTGG 528890 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| || | || || |||||||| || || |||||||| || || Sbjct 528891 ATCTTGCTCTTGACGTTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGTCTTG 528950 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | ||| || |||||||| ||||| Sbjct 528951 CCGGTCAGAGTCTTGACGAAAATCTGCAT 528979 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| |||| |||||||| || || || ||||| || |||||||||||| Sbjct 528981 CCTCCACGGAGGCGCAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 529040 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| || || || || |||| ||| ||||| ||||| || Sbjct 529041 AGTGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGG 529100 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | |||||||| || || || Sbjct 529101 ATACCCTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGACTCAACC 529160 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || | || || ||||| || ||||| Sbjct 529161 TCGAGGGTGATAGTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 529207 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | ||| ||||| || ||||| ||||| || ||||||||||| Sbjct 529209 CCTCCACGAAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 529268 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || ||| || ||||| || || || || || | ||||||||| || || || Sbjct 529269 AGCGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 529328 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | ||||| || || || || Sbjct 529329 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 529388 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 ||||| || ||||| || || || Sbjct 529389 TCGAGGGTGATGGTCTTTCCAGT 529411 >seq810 Length=1034423 Score = 107 bits (118), Expect = 2e-18 Identities = 134/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 134521 ATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAA 134580 || |||| || ||||||||||||| | ||| | || |||||||| || || || | Sbjct 583014 ATACCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGA 582955 Query 134581 AAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCG 134640 | |||| ||||||||| || || || ||||| || || || || || || ||||| Sbjct 582954 AGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGT 582895 Query 134641 CGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAA 134700 ||| | ||||||||||| || || ||||| |||||||| ||||| || | || || | Sbjct 582894 TGTCGATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGA 582835 Query 134701 CGAA 134704 |||| Sbjct 582834 CGAA 582831 >seq609 Length=32548 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || |||||||||||||||||||| || | | ||| || ||| ||||| || Sbjct 20996 GTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCGAGTTG 20937 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || || ||||| | ||| || ||||| || || || ||||| || ||||| || || Sbjct 20936 TTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGGATCTT 20877 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGA 134656 ||| ||||| ||| | ||||| || Sbjct 20876 TTGCTTGACATTGTCAATGGTGTCAGA 20850 >seq723 Length=18298 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/221 (69%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 9091 AAAGAGCTGTATAAAACCGTTTGGGAAATGAAGCAAAGCACGCTGATCGGCATGGCTGCG 9150 ||| |||| || ||||| || ||||| || ||||| || | || | |||||| || Sbjct 4615 AAAAAGCTATACAAAACAGTATGGGAGATTTCACAAAGAACTATTATTGACATGGCCGCT 4556 Query 9151 GATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTAGCCGCACCAA-C 9209 |||||||| |||||||| || || ||||||| | || |||| |||| ||||| | Sbjct 4555 GATAGAGGAGCTTTTATCGACCAATCTCAATCTATGAATTTGTTTACTGCCGAACCAAAC 4496 Query 9210 TTACGCT--TTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTTAAAAACAGGC 9267 || || |||| || | | || | || | ||||| | ||| ||||| || ||| Sbjct 4495 TTTGGCAAATTGACCTCTA---TGCACTTTTATGCCTGGAAGAAGGGATTAAAGACTGGC 4439 Query 9268 ATGTACTATTTGCGCACAAAACCCGCCGCTGAACCTATCAA 9308 |||||||||||| | | | ||| || | ||| | ||||| Sbjct 4438 ATGTACTATTTGAGATCTAGACCTGCAGTTGATGCAATCAA 4398 >seq799 Length=343686 Score = 82.4 bits (90), Expect = 8e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| || || || ||||| || ||||||||||| | ||| || Sbjct 28774 AGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGA 28833 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| || || || || |||| ||||||||| || || || || || || Sbjct 28834 CCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATACCCTCC 28893 Query 134616 TTTTCTTGAA 134625 || ||| ||| Sbjct 28894 TTGTCTGGAA 28903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505393074364360