Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq812 136 4e-27
seq810 107 2e-18
seq609 98.7 1e-15
seq723 84.2 2e-11
seq799 82.4 8e-11
>seq812
Length=913560
Score = 136 bits (150), Expect = 4e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543
||||| || | |||||||| || ||||| || || |||||||| || ||||||||||||
Sbjct 528522 TTTCCACCACGGAGTCGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCG 528581
Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603
| ||| || ||| || ||||| || || ||||| |||| |||||||| || ||
Sbjct 528582 GACAAGGTACGACCGTCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGA 528641
Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663
|| || ||||| || |||||||| || || || ||| | ||||||| |||||
Sbjct 528642 GGGATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATTGTGTCGCTGGATTCA 528701
Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | || || || || || || ||||| ||||| ||||| |||||
Sbjct 528702 ACCTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751
Score = 129 bits (142), Expect = 6e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| || || || ||||| ||||||||||| ||| | |||| | || ||
Sbjct 528771 ACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCTTCC 528830
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
| ||| || || ||||| || | ||||||||| ||||| || ||||||||||| |||||
Sbjct 528831 AACTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTGG 528890
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| || | || || |||||||| || || |||||||| || ||
Sbjct 528891 ATCTTGCTCTTGACGTTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGTCTTG 528950
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| | ||| || |||||||| |||||
Sbjct 528951 CCGGTCAGAGTCTTGACGAAAATCTGCAT 528979
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | ||| |||| |||||||| || || || ||||| || ||||||||||||
Sbjct 528981 CCTCCACGGAGGCGCAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 529040
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| || || || || |||| ||| ||||| ||||| ||
Sbjct 529041 AGTGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGG 529100
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || ||||| ||| | |||||||| || || ||
Sbjct 529101 ATACCCTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGACTCAACC 529160
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || || || || | || || ||||| || |||||
Sbjct 529161 TCGAGGGTGATAGTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 529207
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | || || | ||| ||||| || ||||| ||||| || |||||||||||
Sbjct 529209 CCTCCACGAAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 529268
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| || ||| || ||||| || || || || || | ||||||||| || || ||
Sbjct 529269 AGCGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 529328
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || ||||| ||| | ||||| || || || ||
Sbjct 529329 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 529388
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
||||| || ||||| || || ||
Sbjct 529389 TCGAGGGTGATGGTCTTTCCAGT 529411
>seq810
Length=1034423
Score = 107 bits (118), Expect = 2e-18
Identities = 134/184 (73%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 134521 ATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAA 134580
|| |||| || ||||||||||||| | ||| | || |||||||| || || || |
Sbjct 583014 ATACCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGA 582955
Query 134581 AAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCG 134640
| |||| ||||||||| || || || ||||| || || || || || || |||||
Sbjct 582954 AGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGT 582895
Query 134641 CGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAA 134700
||| | ||||||||||| || || ||||| |||||||| ||||| || | || || |
Sbjct 582894 TGTCGATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGA 582835
Query 134701 CGAA 134704
||||
Sbjct 582834 CGAA 582831
>seq609
Length=32548
Score = 98.7 bits (108), Expect = 1e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || |||||||||||||||||||| || | | ||| || ||| ||||| ||
Sbjct 20996 GTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCGAGTTG 20937
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||| || || ||||| | ||| || ||||| || || || ||||| || ||||| || ||
Sbjct 20936 TTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGGATCTT 20877
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGA 134656
||| ||||| ||| | ||||| ||
Sbjct 20876 TTGCTTGACATTGTCAATGGTGTCAGA 20850
>seq723
Length=18298
Score = 84.2 bits (92), Expect = 2e-11
Identities = 153/221 (69%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 9091 AAAGAGCTGTATAAAACCGTTTGGGAAATGAAGCAAAGCACGCTGATCGGCATGGCTGCG 9150
||| |||| || ||||| || ||||| || ||||| || | || | |||||| ||
Sbjct 4615 AAAAAGCTATACAAAACAGTATGGGAGATTTCACAAAGAACTATTATTGACATGGCCGCT 4556
Query 9151 GATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTAGCCGCACCAA-C 9209
|||||||| |||||||| || || ||||||| | || |||| |||| ||||| |
Sbjct 4555 GATAGAGGAGCTTTTATCGACCAATCTCAATCTATGAATTTGTTTACTGCCGAACCAAAC 4496
Query 9210 TTACGCT--TTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTTAAAAACAGGC 9267
|| || |||| || | | || | || | ||||| | ||| ||||| || |||
Sbjct 4495 TTTGGCAAATTGACCTCTA---TGCACTTTTATGCCTGGAAGAAGGGATTAAAGACTGGC 4439
Query 9268 ATGTACTATTTGCGCACAAAACCCGCCGCTGAACCTATCAA 9308
|||||||||||| | | | ||| || | ||| | |||||
Sbjct 4438 ATGTACTATTTGAGATCTAGACCTGCAGTTGATGCAATCAA 4398
>seq799
Length=343686
Score = 82.4 bits (90), Expect = 8e-11
Identities = 96/130 (74%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||||||||| || || || ||||| || ||||||||||| | ||| ||
Sbjct 28774 AGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGA 28833
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| || || || || |||| ||||||||| || || || || || ||
Sbjct 28834 CCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATACCCTCC 28893
Query 134616 TTTTCTTGAA 134625
|| ||| |||
Sbjct 28894 TTGTCTGGAA 28903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505393074364360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |