Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq219 145 1e-29
>seq219
Length=30711
Score = 145 bits (160), Expect = 1e-29
Identities = 257/373 (69%), Gaps = 4/373 (1%)
Strand=Plus/Plus
Query 161291 GGTATGACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTA 161350
||| | || ||| | || ||| |||| || || || ||| ||| | ||||| |||
Sbjct 12722 GGTTTAACCGATCGTGTTCGTTTCTATCAAGCTTCTACCTCTGAACTCTATGGTAAAGTA 12781
Query 161351 CAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCT 161410
|| ||||| || || ||||||||||| ||||| || || || || ||||| |||||
Sbjct 12782 GTTGAAACACCCCAAAAGGAAACAACACCCTTCTATCCCCGTTCCCCTTATGGTGTAGCC 12841
Query 161411 AAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGT 161470
|| || ||||| ||||||||| |||||| | || || ||| ||| ||
Sbjct 12842 AAGCTTTATGGTTATTGGATTACGGTCAACTACCGTGAATCATACAATATGTTTGCCTGT 12901
Query 161471 AGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAG 161530
| ||||||||||||||||||||| ||||| || || || || ||||| ||||| |||
Sbjct 12902 AATGGTATTCTATTCAACCATGAATCACCTCGTCGTGGCCGTACCTTCGTTACCCGAAAG 12961
Query 161531 ATTACTAGGGGACTATCCCGTATTAGTAC--AGGACTACAGGATTGTCTATACCTAGGTA 161588
|||||| | | || || | || || |||| || || || || || || ||||
Sbjct 12962 ATTACTCGTG--CTGTCGCAGATATCCACTTGGGACGTCAAGAGTGCCTTTATCTCGGTA 13019
Query 161589 ATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGA 161648
|| | | | | || |||||||| |||||| || ||||| || | ||||||| | |
Sbjct 13020 ATATTGATGCTAAGCGTGATTGGGGACATGCTCGTGATTATGTCGAAGGTATGTGGCTCA 13079
Query 161649 TGTTACAACAGGA 161661
|| | || || ||
Sbjct 13080 TGCTGCAGCAAGA 13092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729921908366840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |