Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq219 145 1e-29 >seq219 Length=30711 Score = 145 bits (160), Expect = 1e-29 Identities = 257/373 (69%), Gaps = 4/373 (1%) Strand=Plus/Plus Query 161291 GGTATGACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTA 161350 ||| | || ||| | || ||| |||| || || || ||| ||| | ||||| ||| Sbjct 12722 GGTTTAACCGATCGTGTTCGTTTCTATCAAGCTTCTACCTCTGAACTCTATGGTAAAGTA 12781 Query 161351 CAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCT 161410 || ||||| || || ||||||||||| ||||| || || || || ||||| ||||| Sbjct 12782 GTTGAAACACCCCAAAAGGAAACAACACCCTTCTATCCCCGTTCCCCTTATGGTGTAGCC 12841 Query 161411 AAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGT 161470 || || ||||| ||||||||| |||||| | || || ||| ||| || Sbjct 12842 AAGCTTTATGGTTATTGGATTACGGTCAACTACCGTGAATCATACAATATGTTTGCCTGT 12901 Query 161471 AGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAG 161530 | ||||||||||||||||||||| ||||| || || || || ||||| ||||| ||| Sbjct 12902 AATGGTATTCTATTCAACCATGAATCACCTCGTCGTGGCCGTACCTTCGTTACCCGAAAG 12961 Query 161531 ATTACTAGGGGACTATCCCGTATTAGTAC--AGGACTACAGGATTGTCTATACCTAGGTA 161588 |||||| | | || || | || || |||| || || || || || || |||| Sbjct 12962 ATTACTCGTG--CTGTCGCAGATATCCACTTGGGACGTCAAGAGTGCCTTTATCTCGGTA 13019 Query 161589 ATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGA 161648 || | | | | || |||||||| |||||| || ||||| || | ||||||| | | Sbjct 13020 ATATTGATGCTAAGCGTGATTGGGGACATGCTCGTGATTATGTCGAAGGTATGTGGCTCA 13079 Query 161649 TGTTACAACAGGA 161661 || | || || || Sbjct 13080 TGCTGCAGCAAGA 13092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729921908366840