Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq744 233 3e-56 seq723 205 1e-47 seq578 161 1e-34 >seq744 Length=38458 Score = 233 bits (258), Expect = 3e-56 Identities = 558/837 (67%), Gaps = 15/837 (2%) Strand=Plus/Plus Query 39328 TTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 39387 ||| || ||| || || || || || || || || ||||||| | || || | || Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603 Query 39388 CATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCAA 39447 ||| || ||||| ||||| || || | || | || | |||||| | | || | Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663 Query 39448 TCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 39507 | ||| ||||| ||||| |||||| ||||| || ||||||| || ||||| Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723 Query 39508 AACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTAT--TATC 39565 ||| || ||||| ||||| | ||| || | ||| ||| || || || || |||| Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783 Query 39566 GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAG 39625 || || || | || || | | | ||| |||| | | || || ||| Sbjct 30784 CTTG--ACGCGTTCTTGGCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAG 30841 Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATT 39685 ||| ||| ||||| ||||| | || || ||||| || ||||| | |||||||| Sbjct 30842 TCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATC 30901 Query 39686 AGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCT 39745 | |||||| || ||||||||||| |||| |||||| || ||||| ||||| || ||||| Sbjct 30902 AAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCG 30961 Query 39746 ACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTA---TGTATCCACTTC 39802 || || ||||| |||||||| | ||| | || | | | ||| |||||||| Sbjct 30962 ACAGCAGCAAAGGCAACAAGACGCTCAGCAAAA---GAACCGTTAGAGGAAATCCACTTG 31018 Query 39803 TGTGCCCAATCAG-CTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATA 39861 |||||||||| ||||||| || | |||||| || || || |||||| |||||| Sbjct 31019 AAGGCCCAATCAGCCTTTCTT-TTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCAT 31077 Query 39862 ATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATG 39921 | ||| || | ||||||| | ||| || || || || ||||| || |||||| || Sbjct 31078 TTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTG 31137 Query 39922 GATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC 39981 || ||||||||| || ||||| || || |||||| | ||||||| ||| | || || Sbjct 31138 AATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTC 31197 Query 39982 TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGC 40041 |||||| ||| |||| |||||||| || || ||||| | | ||||| || || Sbjct 31198 ATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGC 31257 Query 40042 CAATACATGTTTAATAAAATA---TTTTTCATCGGGTGTCAATTTATTCCAGTCATTGAT 40098 || || | ||||| | || | |||| || || | ||| |||| | Sbjct 31258 TAAGACGCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAG 31317 Query 40099 ATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTA 40155 || || | ||| | |||||||||||||||||| || || || || || || || Sbjct 31318 GTCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATA 31374 >seq723 Length=18298 Score = 205 bits (226), Expect = 1e-47 Identities = 474/714 (66%), Gaps = 3/714 (0%) Strand=Plus/Plus Query 68412 ATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTT 68471 ||||||||| || || || | || |||| | || || |||||| || | ||| Sbjct 4430 ATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAATTT 4489 Query 68472 GGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCC 68531 | | | |||| ||||| || | |||||| |||||| ||| ||||| |||||||| Sbjct 4490 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAGCTCC 4549 Query 68532 TCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAAT 68591 |||||| || ||||| | |||||| | |||| | ||| ||||| | || || | | Sbjct 4550 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTTTTGTATAG 4609 Query 68592 CTGTTTGATATCATCTGGAAGGCTCG---TATTTTGAATGGATCCACCATCGGATATAAT 68648 || ||||| |||||| |||| || | || ||| || || |||| | || || Sbjct 4610 CTTTTTGAGATCATCAGGAACGCCGGGAATACGTTGGATACTACCGCCATGAGCAATCAT 4669 Query 68649 TATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGG 68708 || |||||||| | ||||||||| || | ||| | | | | | | |||| | Sbjct 4670 CATGTTCTTGATGTTATCATTCCATAAATCGAGCTCAATGAGGTCATTCAATAAATGCTG 4729 Query 68709 ATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGG 68768 || |||||||| ||||| ||| | || | ||| || |||||||| || || || || Sbjct 4730 GTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAGG 4789 Query 68769 TTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCAC 68828 || | |||| ||||| |||| |||||| ||| ||||| |||||||| || || Sbjct 4790 CTCGAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAAC 4849 Query 68829 CAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCA 68888 | | | || | | ||||| | | |||| || || | | | |||||||| Sbjct 4850 AAGAAGAGAGTTACGGACACCATATTTCTTGATATTGGCTCTCAAAGTATTCCAATCGAG 4909 Query 68889 AAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGA 68948 | | || || | |||||||| | ||||| ||| ||||| || | |||| || ||| Sbjct 4910 ATGTTCCGAGCCTTTGACATTCCATAAATCGTGTTGAAGAATACCTTGACTTACAGGTGA 4969 Query 68949 TCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGC 69008 || | || || ||||| ||||| | | || || || ||||| |||||||| || Sbjct 4970 GCCTTCGTAGGTCTCATAGGGTCCCTGTTCTTTCGCAAGCTCACACGAAGCCTCTAAAGC 5029 Query 69009 ACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAA 69068 | | |||||||| |||||||||| | | || | | ||||| || ||| || Sbjct 5030 AGCAAAATAAATTCTTTCGAAAATATCTCTGTTCAATTGAGCAGCTTCAGGAGAATCAAA 5089 Query 69069 TGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGAT 69122 |||||| | | | ||||||||||| || | || ||||| || | |||||| Sbjct 5090 CGGATAACGCATCAAGATAAATGCATCAGCAAGCCCTTGAACGCCGAGACCGAT 5143 Score = 125 bits (138), Expect = 1e-23 Identities = 537/836 (64%), Gaps = 16/836 (2%) Strand=Plus/Plus Query 69772 GCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCA 69831 ||||||| |||| ||||||| ||||| |||||||| ||||| || |||| |||||||| Sbjct 6009 GCAGTGTCATTAAAGACTCTGAGCATTGGAATAATGCCATTGGAGGTACCGTTTGTTCCT 6068 Query 69832 GAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATT 69891 | |||||| || | ||||| || | || | || | || || || Sbjct 6069 GCGATATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCCAGCAGAC 6128 Query 69892 TTAGAGATTAGAGCACAACGTTTCAAT-GTGTCATATATACCCTCTATGCTATCATCTAT 69950 || ||||| ||||||| ||| || || || || || || || || || || ||| | Sbjct 6129 TTGGAGATACGAGCACA-CGTGGTGATAGTATCGTAGATGCCTTCGATACTGTCCTCTTT 6187 Query 69951 CATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGT 70010 ||| | || ||| || || ||||||| |||| | | || || || || || ||||| Sbjct 6188 CATTTGAACAAGGAAGCAACTAGACAATTGAGGTTTAGGTGTACCAGCGTTGAACAATGT 6247 Query 70011 AGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTC 70070 ||| | || ||||| || |||| || | |||| || ||| | || ||| Sbjct 6248 AGGTGTAGCATGAGTAAAGTATTTAGATGACATAAGATCATAGGTTCTGAAGGCGCTTTC 6307 Query 70071 TATATCCC-ACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTA 70129 || || || | ||||| || || || |||||||| | ||| | ||||||||||| | Sbjct 6308 TAGGTCATTACCG-TGAATGCCAATAGCAACACGCATGATCATGTATTGAGGTCGTTCAA 6366 Query 70130 CCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGT 70189 | ||| ||||| || || |||| ||| ||| | |||||||| ||||| ||| Sbjct 6367 CGATTTCGTTATTGATCTTTAACAAGTAACTACGTTCTAACGTTTTAAAGCCAAAGAAGT 6426 Query 70190 TGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTAT---CCTTATATTTGG 70246 | | ||| ||||| |||| ||| || ||| | | |||| | ||| || Sbjct 6427 TAAAATCAAAATCTCTATCGTGAATTATGGCAGCGTCAATCTTATCGGCGTTAGCCATGA 6486 Query 70247 TAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATT--TTTAGGATT 70304 ||| || ||||| ||| | || | | ||| | | | || ||| |||| Sbjct 6487 CAAC-AT---CATAA-AGTTCCTTGGAAACAAGAGGATTGGGTTGCTTTAGTTTGGGATG 6541 Query 70305 AACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAA 70364 ||| | | | | | | || ||| |||||| | | |||||||| || | Sbjct 6542 TTCATGATGGTACAGTTTATGGATGACAGAACTAAACTTATCATCGGTTTCCTTTTGAAG 6601 Query 70365 ATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGT 70424 |||||||| || || | || || || || ||| | |||||||| | || || || || Sbjct 6602 GTTTGATATAGCAATGCGAGCAGCAAGGATGGCAAAATCAGGATGGTTCGTTGT-CATGT 6660 Query 70425 A-GCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCC 70483 | || || | || || | | |||||| ||| | || |||| || | ||| | | Sbjct 6661 ACGCAGCCGTCTCGGCGGTGAGATTATCTAGTTCAACCGTAGTAATGCCTTGATAAACAC 6720 Query 70484 CTTGAATAACTTTCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAAC 70543 | | ||| || || ||||| |||| | | || ||| ||||||||| || | Sbjct 6721 CAGACACAACCTTTTGAGCAATTTTAGCAGGAACAACAAAGTCTTCGTTCAGACCGTAGC 6780 Query 70544 ATAATTTTCTAATACGAGATGTAATTTTATCAAACATAACATTCTCCTTATTTCCA 70599 | | ||| ||||| || || || ||||||||||||||||| || || ||||| Sbjct 6781 AAAGCTTTGATATACGCGAGGTTATCTTATCAAACATAACATTTTCTTTTCTTCCA 6836 >seq578 Length=440600 Score = 161 bits (178), Expect = 1e-34 Identities = 592/915 (65%), Gaps = 13/915 (1%) Strand=Plus/Minus Query 69501 TTGTG-TATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCAT 69559 ||||| || | |||| || || ||||| || | |||||| | || ||| |||| Sbjct 116016 TTGTGGTACAGAGCC--TCAAACTCATCGCCATAGACATCAGAAAGACCGGGAGCCTCAT 115959 Query 69560 TTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAA 69619 |||| || | | | ||| || | | | || ||| || ||||| || ||||||||| Sbjct 115958 TTGGGCAGAATAGGGTCCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAG 115899 Query 69620 TCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttA 69678 |||| || || ||| ||||| || | | ||| ||||| || || || || | Sbjct 115898 TCCAGAGGGC-ATAGAAGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGA 115840 Query 69679 AGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCC 69738 || || | ||||| | || || || ||||| || || || || || || | | || Sbjct 115839 AGGTCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCA 115780 Query 69739 GGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATC 69798 || || || || || ||||| || | |||||| |||||||| || | |||| ||||| Sbjct 115779 GGGCGCTTGTTCCCGCCCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATA 115720 Query 69799 GGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATA 69858 || | || || || || | || || || ||| || ||| ||| | || || ||| Sbjct 115719 GGGACAAGCCCGTTGGAAGTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGATA 115660 Query 69859 TTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAAT 69918 | ||||| || || || || | || ||||| | |||||| ||||| Sbjct 115659 CGGTGGACGTTGAGACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAG 115600 Query 69919 GTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATT 69978 |||||||| |||||||| ||||| || || |||| | | ||| || ||| | || Sbjct 115599 GTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGC 115540 Query 69979 TGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCA 70038 || | || ||| || || || || | || || || ||||||||||| |||| | Sbjct 115539 TGCGGCTGAGGAGTACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTCTGG 115480 Query 70039 GAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGC 70097 || | ||||||||| || || ||| | || | || ||| | || ||||| | ||| Sbjct 115479 GACATCAGATTGTAGGTCTCGATAACCTTCTCGAGGTCATCACCG-TGGATTCCGACCGC 115421 Query 70098 GACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTA 70157 |||||||| | ||| |||||||| || || | || ||| || | ||| || Sbjct 115420 AACACGCATAATCATGTGCTGAGGACGCTCAGCAACCTTTCCATTGATGCGGAGCAGATA 115361 Query 70158 TGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATA 70215 ||| ||||||||| || || || || || | ||| ||||| || | || |||| | Sbjct 115360 CGATCGTTCCAGAGTCTTGAATCCGAAGTATTGGTAGTTGAAA--TCACGGTCATAAACA 115303 Query 70216 ATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACAGTAGGT-GAGAT 70274 ||| | || || | || |||| || || ||| || | |||| | | || || Sbjct 115302 ATAGCGGAGTTCAATTCATCCGCATGCTTCATAATGAT-TTCATACGTTTCTTTCGATAT 115244 Query 70275 AATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATC 70334 ||||| | | ||| ||| || || || ||||||| | | | || | || || Sbjct 115243 CATCGGCGCCGGCTTATTATTCTTCGGGTTGACATAGTGGTAAAGGTCCTGGATGACCAG 115184 Query 70335 ACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAAT 70394 | || | || || || | |||||| | || || | |||||| | || || || || Sbjct 115183 AGAGAACTGCTTCTTGGTCTGCTTGTGGAGGTTGGACACGGCTATACGCGCAGCGAGGAT 115124 Query 70395 AGCATAGTCAGGATG 70409 ||||||||| || || Sbjct 115123 AGCATAGTCTGGGTG 115109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686901561698520