Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq744 233 3e-56
seq723 205 1e-47
seq578 161 1e-34
>seq744
Length=38458
Score = 233 bits (258), Expect = 3e-56
Identities = 558/837 (67%), Gaps = 15/837 (2%)
Strand=Plus/Plus
Query 39328 TTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 39387
||| || ||| || || || || || || || || ||||||| | || || | ||
Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603
Query 39388 CATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCAA 39447
||| || ||||| ||||| || || | || | || | |||||| | | || |
Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663
Query 39448 TCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 39507
| ||| ||||| ||||| |||||| ||||| || ||||||| || |||||
Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723
Query 39508 AACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTAT--TATC 39565
||| || ||||| ||||| | ||| || | ||| ||| || || || || ||||
Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783
Query 39566 GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAG 39625
|| || || | || || | | | ||| |||| | | || || |||
Sbjct 30784 CTTG--ACGCGTTCTTGGCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAG 30841
Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATT 39685
||| ||| ||||| ||||| | || || ||||| || ||||| | ||||||||
Sbjct 30842 TCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATC 30901
Query 39686 AGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCT 39745
| |||||| || ||||||||||| |||| |||||| || ||||| ||||| || |||||
Sbjct 30902 AAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCG 30961
Query 39746 ACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTA---TGTATCCACTTC 39802
|| || ||||| |||||||| | ||| | || | | | ||| ||||||||
Sbjct 30962 ACAGCAGCAAAGGCAACAAGACGCTCAGCAAAA---GAACCGTTAGAGGAAATCCACTTG 31018
Query 39803 TGTGCCCAATCAG-CTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATA 39861
|||||||||| ||||||| || | |||||| || || || |||||| ||||||
Sbjct 31019 AAGGCCCAATCAGCCTTTCTT-TTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCAT 31077
Query 39862 ATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATG 39921
| ||| || | ||||||| | ||| || || || || ||||| || |||||| ||
Sbjct 31078 TTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTG 31137
Query 39922 GATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC 39981
|| ||||||||| || ||||| || || |||||| | ||||||| ||| | || ||
Sbjct 31138 AATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTC 31197
Query 39982 TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGC 40041
|||||| ||| |||| |||||||| || || ||||| | | ||||| || ||
Sbjct 31198 ATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGC 31257
Query 40042 CAATACATGTTTAATAAAATA---TTTTTCATCGGGTGTCAATTTATTCCAGTCATTGAT 40098
|| || | ||||| | || | |||| || || | ||| |||| |
Sbjct 31258 TAAGACGCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAG 31317
Query 40099 ATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTA 40155
|| || | ||| | |||||||||||||||||| || || || || || || ||
Sbjct 31318 GTCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATA 31374
>seq723
Length=18298
Score = 205 bits (226), Expect = 1e-47
Identities = 474/714 (66%), Gaps = 3/714 (0%)
Strand=Plus/Plus
Query 68412 ATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTT 68471
||||||||| || || || | || |||| | || || |||||| || | |||
Sbjct 4430 ATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAATTT 4489
Query 68472 GGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCC 68531
| | | |||| ||||| || | |||||| |||||| ||| ||||| ||||||||
Sbjct 4490 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAGCTCC 4549
Query 68532 TCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAAT 68591
|||||| || ||||| | |||||| | |||| | ||| ||||| | || || | |
Sbjct 4550 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTTTTGTATAG 4609
Query 68592 CTGTTTGATATCATCTGGAAGGCTCG---TATTTTGAATGGATCCACCATCGGATATAAT 68648
|| ||||| |||||| |||| || | || ||| || || |||| | || ||
Sbjct 4610 CTTTTTGAGATCATCAGGAACGCCGGGAATACGTTGGATACTACCGCCATGAGCAATCAT 4669
Query 68649 TATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGG 68708
|| |||||||| | ||||||||| || | ||| | | | | | | |||| |
Sbjct 4670 CATGTTCTTGATGTTATCATTCCATAAATCGAGCTCAATGAGGTCATTCAATAAATGCTG 4729
Query 68709 ATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGG 68768
|| |||||||| ||||| ||| | || | ||| || |||||||| || || || ||
Sbjct 4730 GTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAGG 4789
Query 68769 TTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCAC 68828
|| | |||| ||||| |||| |||||| ||| ||||| |||||||| || ||
Sbjct 4790 CTCGAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAAC 4849
Query 68829 CAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCA 68888
| | | || | | ||||| | | |||| || || | | | ||||||||
Sbjct 4850 AAGAAGAGAGTTACGGACACCATATTTCTTGATATTGGCTCTCAAAGTATTCCAATCGAG 4909
Query 68889 AAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGA 68948
| | || || | |||||||| | ||||| ||| ||||| || | |||| || |||
Sbjct 4910 ATGTTCCGAGCCTTTGACATTCCATAAATCGTGTTGAAGAATACCTTGACTTACAGGTGA 4969
Query 68949 TCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGC 69008
|| | || || ||||| ||||| | | || || || ||||| |||||||| ||
Sbjct 4970 GCCTTCGTAGGTCTCATAGGGTCCCTGTTCTTTCGCAAGCTCACACGAAGCCTCTAAAGC 5029
Query 69009 ACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAA 69068
| | |||||||| |||||||||| | | || | | ||||| || ||| ||
Sbjct 5030 AGCAAAATAAATTCTTTCGAAAATATCTCTGTTCAATTGAGCAGCTTCAGGAGAATCAAA 5089
Query 69069 TGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGAT 69122
|||||| | | | ||||||||||| || | || ||||| || | ||||||
Sbjct 5090 CGGATAACGCATCAAGATAAATGCATCAGCAAGCCCTTGAACGCCGAGACCGAT 5143
Score = 125 bits (138), Expect = 1e-23
Identities = 537/836 (64%), Gaps = 16/836 (2%)
Strand=Plus/Plus
Query 69772 GCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCA 69831
||||||| |||| ||||||| ||||| |||||||| ||||| || |||| ||||||||
Sbjct 6009 GCAGTGTCATTAAAGACTCTGAGCATTGGAATAATGCCATTGGAGGTACCGTTTGTTCCT 6068
Query 69832 GAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATT 69891
| |||||| || | ||||| || | || | || | || || ||
Sbjct 6069 GCGATATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCCAGCAGAC 6128
Query 69892 TTAGAGATTAGAGCACAACGTTTCAAT-GTGTCATATATACCCTCTATGCTATCATCTAT 69950
|| ||||| ||||||| ||| || || || || || || || || || || ||| |
Sbjct 6129 TTGGAGATACGAGCACA-CGTGGTGATAGTATCGTAGATGCCTTCGATACTGTCCTCTTT 6187
Query 69951 CATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGT 70010
||| | || ||| || || ||||||| |||| | | || || || || || |||||
Sbjct 6188 CATTTGAACAAGGAAGCAACTAGACAATTGAGGTTTAGGTGTACCAGCGTTGAACAATGT 6247
Query 70011 AGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTC 70070
||| | || ||||| || |||| || | |||| || ||| | || |||
Sbjct 6248 AGGTGTAGCATGAGTAAAGTATTTAGATGACATAAGATCATAGGTTCTGAAGGCGCTTTC 6307
Query 70071 TATATCCC-ACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTA 70129
|| || || | ||||| || || || |||||||| | ||| | ||||||||||| |
Sbjct 6308 TAGGTCATTACCG-TGAATGCCAATAGCAACACGCATGATCATGTATTGAGGTCGTTCAA 6366
Query 70130 CCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGT 70189
| ||| ||||| || || |||| ||| ||| | |||||||| ||||| |||
Sbjct 6367 CGATTTCGTTATTGATCTTTAACAAGTAACTACGTTCTAACGTTTTAAAGCCAAAGAAGT 6426
Query 70190 TGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTAT---CCTTATATTTGG 70246
| | ||| ||||| |||| ||| || ||| | | |||| | ||| ||
Sbjct 6427 TAAAATCAAAATCTCTATCGTGAATTATGGCAGCGTCAATCTTATCGGCGTTAGCCATGA 6486
Query 70247 TAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATT--TTTAGGATT 70304
||| || ||||| ||| | || | | ||| | | | || ||| ||||
Sbjct 6487 CAAC-AT---CATAA-AGTTCCTTGGAAACAAGAGGATTGGGTTGCTTTAGTTTGGGATG 6541
Query 70305 AACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAA 70364
||| | | | | | | || ||| |||||| | | |||||||| || |
Sbjct 6542 TTCATGATGGTACAGTTTATGGATGACAGAACTAAACTTATCATCGGTTTCCTTTTGAAG 6601
Query 70365 ATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGT 70424
|||||||| || || | || || || || ||| | |||||||| | || || || ||
Sbjct 6602 GTTTGATATAGCAATGCGAGCAGCAAGGATGGCAAAATCAGGATGGTTCGTTGT-CATGT 6660
Query 70425 A-GCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCC 70483
| || || | || || | | |||||| ||| | || |||| || | ||| | |
Sbjct 6661 ACGCAGCCGTCTCGGCGGTGAGATTATCTAGTTCAACCGTAGTAATGCCTTGATAAACAC 6720
Query 70484 CTTGAATAACTTTCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAAC 70543
| | ||| || || ||||| |||| | | || ||| ||||||||| || |
Sbjct 6721 CAGACACAACCTTTTGAGCAATTTTAGCAGGAACAACAAAGTCTTCGTTCAGACCGTAGC 6780
Query 70544 ATAATTTTCTAATACGAGATGTAATTTTATCAAACATAACATTCTCCTTATTTCCA 70599
| | ||| ||||| || || || ||||||||||||||||| || || |||||
Sbjct 6781 AAAGCTTTGATATACGCGAGGTTATCTTATCAAACATAACATTTTCTTTTCTTCCA 6836
>seq578
Length=440600
Score = 161 bits (178), Expect = 1e-34
Identities = 592/915 (65%), Gaps = 13/915 (1%)
Strand=Plus/Minus
Query 69501 TTGTG-TATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCAT 69559
||||| || | |||| || || ||||| || | |||||| | || ||| ||||
Sbjct 116016 TTGTGGTACAGAGCC--TCAAACTCATCGCCATAGACATCAGAAAGACCGGGAGCCTCAT 115959
Query 69560 TTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAA 69619
|||| || | | | ||| || | | | || ||| || ||||| || |||||||||
Sbjct 115958 TTGGGCAGAATAGGGTCCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAG 115899
Query 69620 TCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttA 69678
|||| || || ||| ||||| || | | ||| ||||| || || || || |
Sbjct 115898 TCCAGAGGGC-ATAGAAGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGA 115840
Query 69679 AGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCC 69738
|| || | ||||| | || || || ||||| || || || || || || | | ||
Sbjct 115839 AGGTCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCA 115780
Query 69739 GGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATC 69798
|| || || || || ||||| || | |||||| |||||||| || | |||| |||||
Sbjct 115779 GGGCGCTTGTTCCCGCCCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATA 115720
Query 69799 GGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATA 69858
|| | || || || || | || || || ||| || ||| ||| | || || |||
Sbjct 115719 GGGACAAGCCCGTTGGAAGTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGATA 115660
Query 69859 TTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAAT 69918
| ||||| || || || || | || ||||| | |||||| |||||
Sbjct 115659 CGGTGGACGTTGAGACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAG 115600
Query 69919 GTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATT 69978
|||||||| |||||||| ||||| || || |||| | | ||| || ||| | ||
Sbjct 115599 GTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGC 115540
Query 69979 TGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCA 70038
|| | || ||| || || || || | || || || ||||||||||| |||| |
Sbjct 115539 TGCGGCTGAGGAGTACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTCTGG 115480
Query 70039 GAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGC 70097
|| | ||||||||| || || ||| | || | || ||| | || ||||| | |||
Sbjct 115479 GACATCAGATTGTAGGTCTCGATAACCTTCTCGAGGTCATCACCG-TGGATTCCGACCGC 115421
Query 70098 GACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTA 70157
|||||||| | ||| |||||||| || || | || ||| || | ||| ||
Sbjct 115420 AACACGCATAATCATGTGCTGAGGACGCTCAGCAACCTTTCCATTGATGCGGAGCAGATA 115361
Query 70158 TGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATA 70215
||| ||||||||| || || || || || | ||| ||||| || | || |||| |
Sbjct 115360 CGATCGTTCCAGAGTCTTGAATCCGAAGTATTGGTAGTTGAAA--TCACGGTCATAAACA 115303
Query 70216 ATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACAGTAGGT-GAGAT 70274
||| | || || | || |||| || || ||| || | |||| | | || ||
Sbjct 115302 ATAGCGGAGTTCAATTCATCCGCATGCTTCATAATGAT-TTCATACGTTTCTTTCGATAT 115244
Query 70275 AATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATC 70334
||||| | | ||| ||| || || || ||||||| | | | || | || ||
Sbjct 115243 CATCGGCGCCGGCTTATTATTCTTCGGGTTGACATAGTGGTAAAGGTCCTGGATGACCAG 115184
Query 70335 ACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAAT 70394
| || | || || || | |||||| | || || | |||||| | || || || ||
Sbjct 115183 AGAGAACTGCTTCTTGGTCTGCTTGTGGAGGTTGGACACGGCTATACGCGCAGCGAGGAT 115124
Query 70395 AGCATAGTCAGGATG 70409
||||||||| || ||
Sbjct 115123 AGCATAGTCTGGGTG 115109
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686901561698520
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