Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq744 244 8e-60
>seq744
Length=38458
Score = 244 bits (270), Expect = 8e-60
Identities = 586/874 (67%), Gaps = 18/874 (2%)
Strand=Plus/Minus
Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789
|| |||||| | || || ||||| | || || ||||||||||| |||||| | ||||||
Sbjct 31386 ATCTGGCAATTCTATAAGAAAGCTGAAGCTTCCTTTTGGACAGCTGAAGAAATCGATTTG 31327
Query 43790 ACTAAAGACTTAGCACATTGG-ATTGCATTAAAACC-ACAAGAAAAACAT-TTTATATCT 43846
| || ||| | ||||| | || | ||| | || || | | ||||| |||
Sbjct 31326 AGCAAGGACCTTCATGATTGGGAAAACAAGATGACCGAAAACGAACGCTTCTTTATCTCT 31267
Query 43847 TTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTT-AGTCG 43905
|| || || || ||||||| || || || || |||||||| |||||| |
Sbjct 31266 CGCGTCTTAGCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAAC 31207
Query 43906 GTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCAT 43965
|||| | | ||||| | | || ||||| |||||| ||||| |||||||| ||
Sbjct 31206 TTTTGTG-ATGAAGTCAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATGAT 31148
Query 43966 AGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCA 44025
||||||||||| | |||| ||||||||| |||| || || || ||||||||| ||
Sbjct 31147 TGAAAATATTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGATAACCA 31088
Query 44026 CGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGA 44085
||||| | | ||| ||| || || || | ||| || ||| || || ||
Sbjct 31087 AGAGAAAGAAATGCTCTTTTCTGCTATTGACACTATCCCTTGTATCAAAAGAAAGGCTGA 31028
Query 44086 CTGGGCCCTTAAATGGATAAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGC 44145
|||||| | || ||||| || || | |||||||| || || ||||| || |||||
Sbjct 31027 TTGGGCCTTCAAGTGGATTTCCTCTAACGGTTCTTTTGCTGAGCGTCTTGTTGCCTTTGC 30968
Query 44146 AGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACG 44205
| ||| ||||| |||||||| || || || ||||| |||| |||||| | ||||||||
Sbjct 30967 TGCTGTCGAAGGTATTTTCTTCTCTGGTTCCTTTGCTTCCATTTTTTGGCTCAAGAAACG 30908
Query 44206 AGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACA 44265
|||||||||||||| ||||| || ||||| || || |||||||||||||| | ||
Sbjct 30907 TGGTTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGCCTTCA 30848
Query 44266 TTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTC-ATGTAAGA 44324
| || |||||||| | ||| || |||| | ||||| | | | ||||
Sbjct 30847 TACTGACTTTGCTTGTCTTTTATTTACCCATCTTCG------TAAGCGTCCTAGCCAAGA 30794
Query 44325 --CAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGC 44382
| | ||||| | | || || || | || ||||| |||||| |||| ||
Sbjct 30793 ACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAGGAATTTTTGACGGATGC 30734
Query 44383 ATTACCTGTAAATTTAATAGGAATGAATGAACTTTTGATGAACCAATATATTGAATACAT 44442
| || || | | || || |||||| ||||||| |||||| || |||| | |
Sbjct 30733 TCTTCCCGTTGCTCTCATCGGCATGAATTCTGCTTTGATGTGCCAATACATCGAATTCGT 30674
Query 44443 TGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTG-TACAAAACCCGT 44501
||| |||||| | | | | || || | || || || || | ||| || || |
Sbjct 30673 TGCTGATCGTCTCATGGTTGCTCTTGGATTTGACAAGATTTACATGGCTAC-CAATCCAT 30615
Query 44502 TTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTG 44561
|||| |||||||| | || || | ||||||| || ||||| |||||||| || ||
Sbjct 30614 TTGACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAAGCGTGTCT 30555
Query 44562 GAGAATATCAGCGAATGGGCGTCATGATAACAAG 44595
|| ||||| || || |||||| ||||||
Sbjct 30554 CTGACTATCAACGTGCTGGTGTCATG--AACAAG 30523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397451916512215
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |