Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq578 129 7e-25
seq347 127 3e-24
seq268 127 3e-24
seq657 118 1e-21
>seq578
Length=440600
Score = 129 bits (142), Expect = 7e-25
Identities = 409/626 (65%), Gaps = 16/626 (3%)
Strand=Plus/Minus
Query 111468 TTGTG-TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 111526
||||| || || || |||||||| || || | || || ||||| || |||| | |
Sbjct 116016 TTGTGGTACAGAGCCTCAAACTCATCGCCATAGACATCAGAAAGACCGGGAGCCTCATTT 115957
Query 111527 GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 111586
|| ||||| || | ||| | ||| |||||| ||||||||||| || || ||| ||
Sbjct 115956 GGGCAGAATAGGGTCCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTC 115897
Query 111587 CACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645
|| |||| | ||||| || | | | | || ||||||| | ||| ||||| || |
Sbjct 115896 CAGAGGGCATAGAAGAGGTCACGTGCTCTGA-CCTCTTCCTTACCGTGGTTCTTGCGAAG 115838
Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 111702
|| | |||||| | ||| || | |||||| ||||| || |||| |||| || ||
Sbjct 115837 GTCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGG 115778
Query 111703 ---CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758
||| | ||||| || | || || | || ||| ||| || || |||||||
Sbjct 115777 GCGCTTGTTCCCGCCC----TGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCA 115722
Query 111759 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 111818
| || | || || | || || || || || | || ||| | || | |
Sbjct 115721 TAGGGACAAGCCCGTTGGAAGTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGA 115662
Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878
| |||| || | |||||||| || || ||| ||||| ||||| | | |
Sbjct 115661 TACGGTGGACGTTGAGACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCA 115602
Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938
|| |||||||||| | || ||||||||| | ||||||||||||| || ||
Sbjct 115601 AGGTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCA 115542
Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCT 111997
|||||| || ||||| || ||||| || || || | |||||| |||| || |
Sbjct 115541 GCTGCGGCTGAGGAGTACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTC- 115483
Query 111998 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057
||||||||| | ||| ||||| | || || | ||| || |||||||| ||||
Sbjct 115482 TGGGACATCAGATTGTAGGTCTCGATAACCTTCTCGAGGTCATCACCGTGGATTCCGACC 115423
Query 112058 GCGACCCGCATGAACATGTACTGTGG 112083
|| || ||||| | ||||| ||| ||
Sbjct 115422 GCAACACGCATAATCATGTGCTGAGG 115397
Score = 111 bits (122), Expect = 2e-19
Identities = 130/176 (74%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301
|| ||||| |||||||| || |||||| | |||||||| | || || || ||
Sbjct 116296 GAGGCCAAGTTGCAAACGGCGACCTCATCGGGGGCAGTGTACTCGATGATCTCAGTGCAG 116237
Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361
| ||| || || || || |||| ||||| ||||| |||||||||||||||||||||
Sbjct 116236 AGGTTAGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCACGCATCC 116177
Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417
||||| |||||| |||| | || ||||| ||||| | | |||||| || | |||
Sbjct 116176 TTGTACAGCATGAAGGGGTTACCGGTCTCGGTCTGGGCCTCGAGAATGGCATACCA 116121
>seq347
Length=15602
Score = 127 bits (140), Expect = 3e-24
Identities = 215/307 (70%), Gaps = 6/307 (2%)
Strand=Plus/Minus
Query 182497 AGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCA 182556
||| ||| | || | ||| ||||||||||| || |||||||||| ||| ||||||||
Sbjct 5268 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 5209
Query 182557 TAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAA 182616
| ||||| | ||||||||| || | ||| |||| || || | ||| || || ||||
Sbjct 5208 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 5149
Query 182617 GACCAAGGATCTTCTTGAGATCATTGAACTCCTGGT--TTGATGTAAGCTGTGCCACCGA 182674
||||||| || ||||| | |||| || | | || ||| || | || ||
Sbjct 5148 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATG--AGTTCAGCATTAGA 5091
Query 182675 AGCGTCCCGAACATTCTTACATTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACC 182734
| | || ||||| ||| |||||| |||| ||||| ||||| |||| ||||||||
Sbjct 5090 AACATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACC 5031
Query 182735 AACGACAGAGAGACC-CGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGA 182793
||| || || | ||| | ||| | || | || || |||||||| || |||| || |
Sbjct 5030 AACTACTGACATACCACTCAA-GACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCA 4972
Query 182794 GAGTACA 182800
|||||||
Sbjct 4971 GAGTACA 4965
>seq268
Length=14648
Score = 127 bits (140), Expect = 3e-24
Identities = 215/307 (70%), Gaps = 6/307 (2%)
Strand=Plus/Minus
Query 182497 AGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCA 182556
||| ||| | || | ||| ||||||||||| || |||||||||| ||| ||||||||
Sbjct 5310 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 5251
Query 182557 TAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAA 182616
| ||||| | ||||||||| || | ||| |||| || || | ||| || || ||||
Sbjct 5250 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 5191
Query 182617 GACCAAGGATCTTCTTGAGATCATTGAACTCCTGGT--TTGATGTAAGCTGTGCCACCGA 182674
||||||| || ||||| | |||| || | | || ||| || | || ||
Sbjct 5190 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATG--AGTTCAGCATTAGA 5133
Query 182675 AGCGTCCCGAACATTCTTACATTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACC 182734
| | || ||||| ||| |||||| |||| ||||| ||||| |||| ||||||||
Sbjct 5132 AACATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACC 5073
Query 182735 AACGACAGAGAGACC-CGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGA 182793
||| || || | ||| | ||| | || | || || |||||||| || |||| || |
Sbjct 5072 AACTACTGACATACCACTCAA-GACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCA 5014
Query 182794 GAGTACA 182800
|||||||
Sbjct 5013 GAGTACA 5007
>seq657
Length=446211
Score = 118 bits (130), Expect = 1e-21
Identities = 296/448 (66%), Gaps = 4/448 (1%)
Strand=Plus/Plus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| ||||| |||||||| |||||||||||||| ||| | || ||||| |||||
Sbjct 211787 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGCGAGATGTTGTCCATG 211846
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCA--AATGGGTGGCACCCCAACTTGTTTGAGGAGAC 122488
||||| || || || | ||||| | | | || || || || || |
Sbjct 211847 AAGTCGAAGGGGTTTGTGGCGTTGTAGTACTTCTTGTTGCC--AAGAGAGACCAGCAGGC 211904
Query 122489 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 122548
| || | || |||| ||||||| | |||| || ||||||||||| | |||| |
Sbjct 211905 GGTCGGCAACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATACCAAGGAGGGCAA 211964
Query 122549 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 122608
||||| |||||| | |||| | | |||||| || || || || | ||| |
Sbjct 211965 CGGGGAGGGCGTCCGTCAGGAACTCCTGCTCAATGTCGACGGCATCAACGATGATCTTCT 212024
Query 122609 GGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCT 122668
|| | || | | ||| | || || ||| ||| || || ||
Sbjct 212025 CGACAACCTCAGGTGAGGGGCGGTTGTTCAGGTGGGAGAACAGCAGACAAGCGAAGTCGG 212084
Query 122669 GGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGAC 122728
||| ||||||||||| || || || || || || |||||| ||||| |||||||| |
Sbjct 212085 TGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGGC 212144
Query 122729 CCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 122788
| |||||||||| ||| | |||| | ||| || || ||||||||||||||||| |||
Sbjct 212145 CACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCAACAG 212204
Query 122789 ACGCAAACGCAAAAAGGCGTTCGGCGAA 122816
|| || |||| | ||| | ||||||
Sbjct 212205 CAGCGAAGGCAACCAAGCGCTGGGCGAA 212232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628025382112800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |