Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq578 129 7e-25 seq347 127 3e-24 seq268 127 3e-24 seq657 118 1e-21 >seq578 Length=440600 Score = 129 bits (142), Expect = 7e-25 Identities = 409/626 (65%), Gaps = 16/626 (3%) Strand=Plus/Minus Query 111468 TTGTG-TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 111526 ||||| || || || |||||||| || || | || || ||||| || |||| | | Sbjct 116016 TTGTGGTACAGAGCCTCAAACTCATCGCCATAGACATCAGAAAGACCGGGAGCCTCATTT 115957 Query 111527 GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 111586 || ||||| || | ||| | ||| |||||| ||||||||||| || || ||| || Sbjct 115956 GGGCAGAATAGGGTCCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTC 115897 Query 111587 CACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 || |||| | ||||| || | | | | || ||||||| | ||| ||||| || | Sbjct 115896 CAGAGGGCATAGAAGAGGTCACGTGCTCTGA-CCTCTTCCTTACCGTGGTTCTTGCGAAG 115838 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 111702 || | |||||| | ||| || | |||||| ||||| || |||| |||| || || Sbjct 115837 GTCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGG 115778 Query 111703 ---CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758 ||| | ||||| || | || || | || ||| ||| || || ||||||| Sbjct 115777 GCGCTTGTTCCCGCCC----TGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCA 115722 Query 111759 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 111818 | || | || || | || || || || || | || ||| | || | | Sbjct 115721 TAGGGACAAGCCCGTTGGAAGTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGA 115662 Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878 | |||| || | |||||||| || || ||| ||||| ||||| | | | Sbjct 115661 TACGGTGGACGTTGAGACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCA 115602 Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938 || |||||||||| | || ||||||||| | ||||||||||||| || || Sbjct 115601 AGGTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCA 115542 Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCT 111997 |||||| || ||||| || ||||| || || || | |||||| |||| || | Sbjct 115541 GCTGCGGCTGAGGAGTACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTC- 115483 Query 111998 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057 ||||||||| | ||| ||||| | || || | ||| || |||||||| |||| Sbjct 115482 TGGGACATCAGATTGTAGGTCTCGATAACCTTCTCGAGGTCATCACCGTGGATTCCGACC 115423 Query 112058 GCGACCCGCATGAACATGTACTGTGG 112083 || || ||||| | ||||| ||| || Sbjct 115422 GCAACACGCATAATCATGTGCTGAGG 115397 Score = 111 bits (122), Expect = 2e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301 || ||||| |||||||| || |||||| | |||||||| | || || || || Sbjct 116296 GAGGCCAAGTTGCAAACGGCGACCTCATCGGGGGCAGTGTACTCGATGATCTCAGTGCAG 116237 Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361 | ||| || || || || |||| ||||| ||||| ||||||||||||||||||||| Sbjct 116236 AGGTTAGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCACGCATCC 116177 Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 ||||| |||||| |||| | || ||||| ||||| | | |||||| || | ||| Sbjct 116176 TTGTACAGCATGAAGGGGTTACCGGTCTCGGTCTGGGCCTCGAGAATGGCATACCA 116121 >seq347 Length=15602 Score = 127 bits (140), Expect = 3e-24 Identities = 215/307 (70%), Gaps = 6/307 (2%) Strand=Plus/Minus Query 182497 AGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCA 182556 ||| ||| | || | ||| ||||||||||| || |||||||||| ||| |||||||| Sbjct 5268 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 5209 Query 182557 TAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAA 182616 | ||||| | ||||||||| || | ||| |||| || || | ||| || || |||| Sbjct 5208 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 5149 Query 182617 GACCAAGGATCTTCTTGAGATCATTGAACTCCTGGT--TTGATGTAAGCTGTGCCACCGA 182674 ||||||| || ||||| | |||| || | | || ||| || | || || Sbjct 5148 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATG--AGTTCAGCATTAGA 5091 Query 182675 AGCGTCCCGAACATTCTTACATTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACC 182734 | | || ||||| ||| |||||| |||| ||||| ||||| |||| |||||||| Sbjct 5090 AACATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACC 5031 Query 182735 AACGACAGAGAGACC-CGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGA 182793 ||| || || | ||| | ||| | || | || || |||||||| || |||| || | Sbjct 5030 AACTACTGACATACCACTCAA-GACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCA 4972 Query 182794 GAGTACA 182800 ||||||| Sbjct 4971 GAGTACA 4965 >seq268 Length=14648 Score = 127 bits (140), Expect = 3e-24 Identities = 215/307 (70%), Gaps = 6/307 (2%) Strand=Plus/Minus Query 182497 AGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCA 182556 ||| ||| | || | ||| ||||||||||| || |||||||||| ||| |||||||| Sbjct 5310 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 5251 Query 182557 TAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAA 182616 | ||||| | ||||||||| || | ||| |||| || || | ||| || || |||| Sbjct 5250 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 5191 Query 182617 GACCAAGGATCTTCTTGAGATCATTGAACTCCTGGT--TTGATGTAAGCTGTGCCACCGA 182674 ||||||| || ||||| | |||| || | | || ||| || | || || Sbjct 5190 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATG--AGTTCAGCATTAGA 5133 Query 182675 AGCGTCCCGAACATTCTTACATTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACC 182734 | | || ||||| ||| |||||| |||| ||||| ||||| |||| |||||||| Sbjct 5132 AACATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACC 5073 Query 182735 AACGACAGAGAGACC-CGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGA 182793 ||| || || | ||| | ||| | || | || || |||||||| || |||| || | Sbjct 5072 AACTACTGACATACCACTCAA-GACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCA 5014 Query 182794 GAGTACA 182800 ||||||| Sbjct 5013 GAGTACA 5007 >seq657 Length=446211 Score = 118 bits (130), Expect = 1e-21 Identities = 296/448 (66%), Gaps = 4/448 (1%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| ||||| |||||||| |||||||||||||| ||| | || ||||| ||||| Sbjct 211787 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGCGAGATGTTGTCCATG 211846 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCA--AATGGGTGGCACCCCAACTTGTTTGAGGAGAC 122488 ||||| || || || | ||||| | | | || || || || || | Sbjct 211847 AAGTCGAAGGGGTTTGTGGCGTTGTAGTACTTCTTGTTGCC--AAGAGAGACCAGCAGGC 211904 Query 122489 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 122548 | || | || |||| ||||||| | |||| || ||||||||||| | |||| | Sbjct 211905 GGTCGGCAACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATACCAAGGAGGGCAA 211964 Query 122549 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 122608 ||||| |||||| | |||| | | |||||| || || || || | ||| | Sbjct 211965 CGGGGAGGGCGTCCGTCAGGAACTCCTGCTCAATGTCGACGGCATCAACGATGATCTTCT 212024 Query 122609 GGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCT 122668 || | || | | ||| | || || ||| ||| || || || Sbjct 212025 CGACAACCTCAGGTGAGGGGCGGTTGTTCAGGTGGGAGAACAGCAGACAAGCGAAGTCGG 212084 Query 122669 GGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGAC 122728 ||| ||||||||||| || || || || || || |||||| ||||| |||||||| | Sbjct 212085 TGTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGGC 212144 Query 122729 CCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 122788 | |||||||||| ||| | |||| | ||| || || ||||||||||||||||| ||| Sbjct 212145 CACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCAACAG 212204 Query 122789 ACGCAAACGCAAAAAGGCGTTCGGCGAA 122816 || || |||| | ||| | |||||| Sbjct 212205 CAGCGAAGGCAACCAAGCGCTGGGCGAA 212232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628025382112800