Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq578 125 9e-24
seq657 114 2e-20
seq347 109 7e-19
seq268 109 7e-19
seq744 100 4e-16
seq219 96.9 4e-15
>seq578
Length=440600
Score = 125 bits (138), Expect = 9e-24
Identities = 404/619 (65%), Gaps = 16/619 (3%)
Strand=Plus/Minus
Query 118942 TTGTG-TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT 119000
||||| || || || |||||||| || || | | || || || || || |||| || |
Sbjct 116016 TTGTGGTACAGAGCCTCAAACTCATCGCCATAGACATCAGAAAGACCGGGAGCCTCATTT 115957
Query 119001 GGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 119060
|||||||| || | ||| | ||| |||||| |||||||||||||| || || ||
Sbjct 115956 GGGCAGAATAGGGTCCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTC 115897
Query 119061 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 119120
||||| || ||||||| || || | | ||||| | || || || || |
Sbjct 115896 CAGAGGGCATAGAAGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAGG 115837
Query 119121 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTA 119180
||||| || || | ||| || | |||||| || |||||||| | |||| | || |
Sbjct 115836 TCCAAGAACTCAAAGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACC---A 115780
Query 119181 CGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATT 119234
| || || |||||| || || || |||||| ||| || || ||||||||
Sbjct 115779 GGGCGCTTGTTCCCGCCCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATA 115720
Query 119235 GGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGA 119292
|| | | || | ||| || || || || |||| || || || | || | ||
Sbjct 115719 GGGACAAGCCCGTTGGAAGTTCCGTTAGTACCACCGATGTAAGAACCT--GTAGCACGGA 115662
Query 119293 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 119352
| ||||| || | ||||||||| || || ||| ||||| || || | | |
Sbjct 115661 TACGGTGGACGTTGAGACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCA 115602
Query 119353 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACA 119412
|| | ||||| || || || ||| |||| | |||| ||||||||| | ||
Sbjct 115601 AGGTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCA 115542
Query 119413 TTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA-CATACCT 119471
|| ||| || ||||| |||||||| ||||| || | ||||| |||| || |
Sbjct 115541 GCTGCGGCTGAGGAGTACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTC- 115483
Query 119472 TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATC 119531
||||||||| | ||||||||| | || | ||| || ||||| || |||| |
Sbjct 115482 TGGGACATCAGATTGTAGGTCTCGATAACCTTCTCGAGGTCATCACCGTGGATTCCGACC 115423
Query 119532 GAGACCCGCATAAACATGT 119550
| || ||||||| |||||
Sbjct 115422 GCAACACGCATAATCATGT 115404
Score = 93.3 bits (102), Expect = 5e-14
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 118750 CAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTT 118809
|||||||||| || || || ||||| | ||| || || || || |||| |||||| |
Sbjct 116262 CAGTGTACTCGATGATCTCAGTGCAGAGGTTAGAGCTGCGGATAGTACCCAGGTTCTTCT 116203
Query 118810 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 118869
| || ||| |||| |||||||||||||| |||||| | || | || ||||| || |
Sbjct 116202 GGTTGCTCTTCTTGTTGCACGCATCCTTGTACAGCATGAAGGGGTTACCGGTCTCGGTCT 116143
Query 118870 GGGACTTGAGAATAGCCTTCCAGA 118893
||| || |||||| || | |||||
Sbjct 116142 GGGCCTCGAGAATGGCATACCAGA 116119
>seq657
Length=446211
Score = 114 bits (126), Expect = 2e-20
Identities = 104/131 (79%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086
||| |||||||| ||||| ||||| || || || |||||| |||||| |||||||| ||
Sbjct 212086 GTGCAGACCCTCATCACGAGAGATCAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGGCC 212145
Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146
|||||||||| |||||| || | || ||||||||||||||||| ||||| |||
Sbjct 212146 ACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCAACAGC 212205
Query 130147 CGCGAACGCAA 130157
||||| ||||
Sbjct 212206 AGCGAAGGCAA 212216
>seq347
Length=15602
Score = 109 bits (120), Expect = 7e-19
Identities = 218/323 (67%), Gaps = 0/323 (0%)
Strand=Plus/Minus
Query 179737 AGGAGCGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCA 179796
|| ||||| || | | | ||| ||| | |||| ||| |||||||| || |||||||||
Sbjct 5287 AGAAGCGAGGGGAACATGGAGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCA 5228
Query 179797 TCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGA 179856
|| | ||| ||| ||||| ||||| | |||||||| || | ||| |||| || |
Sbjct 5227 TCATGATCTTGATCTGTCATGATCATCAAACGACCATATCGTAACTCATCAACACTTTCA 5168
Query 179857 TAATCCTTACCTTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGAT 179916
|| | ||||| || |||||||| | || ||||| | |||| |||| ||
Sbjct 5167 TACTTTTTACCATGCTGAAGACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTC 5108
Query 179917 GTGAGTTGCGCCACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAACACA 179976
|||||| || ||| |||| || || || || ||||| | ||||| |||
Sbjct 5107 ATGAGTTCAGCATTAGAAACATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACA 5048
Query 179977 CCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCA 180036
|| |||| ||||||||||| || || | |||| | | || | ||| || ||||||
Sbjct 5047 CCATAGTAGTCACGACCAACTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCA 4988
Query 180037 CCCTCCGTCACGATGAGCGTACA 180059
|| || || | || || |||||
Sbjct 4987 CCTTCTGTGATTATCAGAGTACA 4965
>seq268
Length=14648
Score = 109 bits (120), Expect = 7e-19
Identities = 218/323 (67%), Gaps = 0/323 (0%)
Strand=Plus/Minus
Query 179737 AGGAGCGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCA 179796
|| ||||| || | | | ||| ||| | |||| ||| |||||||| || |||||||||
Sbjct 5329 AGAAGCGAGGGGAACATGGAGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCA 5270
Query 179797 TCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGA 179856
|| | ||| ||| ||||| ||||| | |||||||| || | ||| |||| || |
Sbjct 5269 TCATGATCTTGATCTGTCATGATCATCAAACGACCATATCGTAACTCATCAACACTTTCA 5210
Query 179857 TAATCCTTACCTTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGAT 179916
|| | ||||| || |||||||| | || ||||| | |||| |||| ||
Sbjct 5209 TACTTTTTACCATGCTGAAGACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTC 5150
Query 179917 GTGAGTTGCGCCACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAACACA 179976
|||||| || ||| |||| || || || || ||||| | ||||| |||
Sbjct 5149 ATGAGTTCAGCATTAGAAACATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACA 5090
Query 179977 CCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCA 180036
|| |||| ||||||||||| || || | |||| | | || | ||| || ||||||
Sbjct 5089 CCATAGTAGTCACGACCAACTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCA 5030
Query 180037 CCCTCCGTCACGATGAGCGTACA 180059
|| || || | || || |||||
Sbjct 5029 CCTTCTGTGATTATCAGAGTACA 5007
>seq744
Length=38458
Score = 100 bits (110), Expect = 4e-16
Identities = 181/262 (69%), Gaps = 7/262 (3%)
Strand=Plus/Plus
Query 130028 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 130087
|| || || || ||||| |||| | |||||| ||| || ||| ||||| | |||
Sbjct 30848 TGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAAACCA 30907
Query 130088 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 130147
|| ||||| | ||| ||||| | | ||| || ||||||||||| || || || |||
Sbjct 30908 CGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGACAGCA 30967
Query 130148 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCC 130207
|| || |||| |||||||||||||| || | | || | || |||||| | |||
Sbjct 30968 GCAAAGGCAACAAGACGCTCAGCAAAAGAACCG---TTAGAGGAAATCCACTTGAAGGCC 31024
Query 130208 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTT 130267
|| | |||||| | | |||||| |||| || | || || |||||| | || ||
Sbjct 31025 CAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAG--CATTTCTT 31082
Query 130268 TCTGATGG--ATCTTTGATGTA 130287
||| ||| ||||||||| ||
Sbjct 31083 TCTCTTGGTTATCTTTGATATA 31104
>seq219
Length=30711
Score = 96.9 bits (106), Expect = 4e-15
Identities = 261/398 (66%), Gaps = 6/398 (2%)
Strand=Plus/Plus
Query 11802 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 11861
|||||||| ||| |||| || | | ||||||||| ||| | || ||||| ||
Sbjct 12746 TATCAAGCTTCTACCTCTGAACTCTATGGTAAAGTAGTTGAAACACCCCAAAAGGAAACA 12805
Query 11862 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 11921
|| ||||||||||| || ||| ||||| || | ||| || | ||||| | |
Sbjct 12806 ACACCCTTCTATCCCCGTTCCCCTTATGGTGTAGCCAAGCTTTATGGTTATTGGATTACG 12865
Query 11922 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCTGGTATTCTCTTCAACCACGAG 11981
|| ||||| ||||| || | | ||||| || ||||||||| |||||||| ||
Sbjct 12866 GTCAACTACCGTGAATCATACAATATGTTTGCCTGTAATGGTATTCTATTCAACCATGAA 12925
Query 11982 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGATGGTATCAAACAAAT- 12040
||||| |||||||||| ||||| || ||||| || || | || | | ||
Sbjct 12926 TCACCTCGTCGTGGCCGTACCTTCGTTACCCGAAAGATTACTCGTGCTGTCGCAGATATC 12985
Query 12041 --CGTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGG 12098
| ||| || | |||| | || | | || || | | || || | || |||
Sbjct 12986 CACTTGGGACGTCA---AGAGTGCCTTTATCTCGGTAATATTGATGCTAAGCGTGATTGG 13042
Query 12099 GGACATGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGAC 12158
|||||||| || ||||| |||| ||||||||| | || || ||||| || | |
Sbjct 13043 GGACATGCTCGTGATTATGTCGAAGGTATGTGGCTCATGCTGCAGCAAGATCAGCCTCAA 13102
Query 12159 GAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAG 12196
|| | ||| | || || || || |||||| | |||||
Sbjct 13103 GATTTCGTCTTGGCTACTGGTGAAACACACACAGTCAG 13140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618428683239080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |