Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq744 140 4e-28
seq578 125 8e-24
seq657 123 3e-23
seq347 105 8e-18
seq268 105 8e-18
seq723 96.9 4e-15
>seq744
Length=38458
Score = 140 bits (154), Expect = 4e-28
Identities = 289/417 (69%), Gaps = 11/417 (3%)
Strand=Plus/Minus
Query 94531 GCATTCTTTGCTGGATCCGATGGAATTGTTTTTGAGAATATCAATAACAACTTTGCTGAT 94590
|| ||||||||||| || ||||| |||||| ||| || | | | |||||| ||||
Sbjct 31257 GCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAACTTTTGTGAT 31198
Query 94591 GAGGTGCA-ATCCTCTGAAGCGAGATCCTTCTATGCGTATCAGTGTCATAAT-GAAATGG 94648
|| || | || | ||||||| | || ||||||| | ||| |||| || ||||
Sbjct 31197 GAAGTCAAGATTC-CTGAAGCTAAATGTTTCTATGGCTTTCAAA-TCATGATTGAAAATA 31140
Query 94649 TGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGA 94708
| || | || || |||||| | || |||| ||||| || ||| |||||
Sbjct 31139 TTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGATAACCAAGAGAAAG 31080
Query 94709 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAG-CGGATTGGGCT 94767
| ||||||| || || | || | || ||||| |||||||||| | ||||||||
Sbjct 31079 AAATGCTCTTTTCTGCTATTGACACTATCCCTTGTAT-CAAAAGAAAGGCTGATTGGGCC 31021
Query 94768 ATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGT 94827
| |||||| || | || || |||| ||||||||||| || | || ||||| |
Sbjct 31020 TTCAAGTGGATTTCCTCTAA--CG-GTTCTTTTGCTGAGCGTCTTGTTGCCTTTGCTGCT 30964
Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGG 94886
|| || ||||| ||||||||||||||||| ||| | |||| |||||||||||| || ||
Sbjct 30963 GTCGAAGGTATTTTCTTCTCTGGTTCCTT-TGCTTCCATTTTTTGGCTCAAGAAACGTGG 30905
Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCA 94943
| | ||||| ||| | ||| ||| || | |||| |||||| || || || ||
Sbjct 30904 TTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGCCTTCA 30848
>seq578
Length=440600
Score = 125 bits (138), Expect = 8e-24
Identities = 408/626 (65%), Gaps = 16/626 (3%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| | ||||| || || |||| || || || || ||| | || ||
Sbjct 115397 CCTCAGCACATGATTATGCGTGTTGCGGTCGGAATCCACGGTGATGACCTCGAGAAGGTT 115456
Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| | ||||||||| | || |||| |||||| | || || || ||
Sbjct 115457 ATCGAGACCTACAATCTGATGTCCCA-GAAATACTTCACTCACGCCTCGCCGACTCTGTT 115515
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| || ||||| || || || || || ||||||||||||| | ||||||||
Sbjct 115516 CAACGCCGGTACTCCTCAGCCGCAGCTGGCCTCCTGCTTCCTTATCGATATGAAGGAGGA 115575
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| || | |||||||||| || | | | ||||| ||||| ||| || ||
Sbjct 115576 CAGCATTGAGGGTATCTATGACACCTTGAAGACTTGTGCCATGATCTCCAAGACTGCGGG 115635
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
|||||||| | || |||| | | | || | ||| || | || || ||
Sbjct 115636 TGGTATTGGTCTCAACGTCCACCGTATCCGTGCTACAGGTTCTTACATCGGTGGTACTAA 115695
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
|| || | || || | || |||||||| || || ||| ||| || | || ||
Sbjct 115696 CGGAACTTCCAACGGGCTTGTCCCTATGCTTCGAGTGTTCAACAACACTGCAAGATACGT 115755
Query 104581 AAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
| || ||||| | ||| || || |||| |||| || ||||| ||||
Sbjct 115756 TGACCA----GGGCGGGAACAAGCGCCCTGGTGCTTTCGCTATCTACCTGGAGCCCTGGC 115811
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
|| | || ||| | |||||| | || | || ||||| ||| | || |||| | |
Sbjct 115812 ACTCCGACATCTTTGAGTTCTTGGACCTTCGCAAGAACCACGGTAAGGAAGAGGT-CAGA 115870
Query 104694 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752
|| || || ||||||| || ||||||| ||| ||||||||||||||| | ||||||
Sbjct 115871 GCACGTGACCTCTTCTATGCCCTCTGGACTCCCGATCTCTTCATGAAGCGTGTTGAGTCT 115930
Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812
| || | ||| | || || || ||| | |||| || ||||| || |||| | ||
Sbjct 115931 AACGGTGACTGGACCCTATTCTGCCCAAATGAGGCTCCCGGTCTTTCTGATGTCTATGGC 115990
Query 104813 GAGGAGTTTGAAGCCCTTTA-CACAA 104837
|| |||||||| || || || |||||
Sbjct 115991 GATGAGTTTGAGGCTCTGTACCACAA 116016
>seq657
Length=446211
Score = 123 bits (136), Expect = 3e-23
Identities = 98/118 (83%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 94827 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGG 94886
|||||||||||||||||||||||| || ||| | |||| | ||||| |||||||| ||
Sbjct 212203 TGTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATCTTCTGGCTGAAGAAGCGTGG 212144
Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|||||||| ||||| |||||| |||||||| ||||||||||| ||||| || |||
Sbjct 212143 CCTCATGCCTGGTCTGACCTTCTCTAACGAGCTGATCTCTCGTGATGAGGGTCTGCAC 212086
>seq347
Length=15602
Score = 105 bits (116), Expect = 8e-18
Identities = 199/293 (68%), Gaps = 0/293 (0%)
Strand=Plus/Minus
Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219
|||| || ||||||||||| || ||||| || | ||| ||| ||||||||||| | |
Sbjct 5257 TTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCATGATCATCAAA 5198
Query 169220 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 169279
|||||||| || | ||| |||| || ||| | ||||| || |||||||| | ||
Sbjct 5197 CGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAAGACCAAGAATA 5138
Query 169280 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACA 169339
||||| | |||| |||| || |||| | | ||| |||| |||||
Sbjct 5137 GCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAACATCACGAACG 5078
Query 169340 TTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGA 169399
||| || ||||||| ||||| ||||| |||| ||||||||||| || || | |
Sbjct 5077 TTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAACTACTGACATA 5018
Query 169400 CCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452
|| | | || | ||| || || ||||| || |||| || || |||||
Sbjct 5017 CCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAGTACA 4965
>seq268
Length=14648
Score = 105 bits (116), Expect = 8e-18
Identities = 199/293 (68%), Gaps = 0/293 (0%)
Strand=Plus/Minus
Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219
|||| || ||||||||||| || ||||| || | ||| ||| ||||||||||| | |
Sbjct 5299 TTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCATGATCATCAAA 5240
Query 169220 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 169279
|||||||| || | ||| |||| || ||| | ||||| || |||||||| | ||
Sbjct 5239 CGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAAGACCAAGAATA 5180
Query 169280 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACA 169339
||||| | |||| |||| || |||| | | ||| |||| |||||
Sbjct 5179 GCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAACATCACGAACG 5120
Query 169340 TTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGA 169399
||| || ||||||| ||||| ||||| |||| ||||||||||| || || | |
Sbjct 5119 TTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAACTACTGACATA 5060
Query 169400 CCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452
|| | | || | ||| || || ||||| || |||| || || |||||
Sbjct 5059 CCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAGTACA 5007
>seq723
Length=18298
Score = 96.9 bits (106), Expect = 4e-15
Identities = 285/429 (66%), Gaps = 13/429 (3%)
Strand=Plus/Minus
Query 104320 TCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTT 104379
||| || ||||| || | ||||| ||||||||||| | ||| ||| |||| ||||||||
Sbjct 6260 TCATGCTACACCTACATTGTTCAACGCTGGTACACCTAAACCTCAATTGTCTAGTTGCTT 6201
Query 104380 CCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGC 104439
|||| | | || |||||| ||| | || ||||| | ||| | || ||||||
Sbjct 6200 CCTTGTTCAAATGAAAGAGGACAGTATCGAAGGCATCTACGATACTATCACCACGTGTGC 6141
Query 104440 GCAAATCTCAAAGTGGGCTGGGGGTATTGG-GATGCACATC-CATGATGTGAGAGCCAAT 104497
| ||||| |||| ||||| ||| |||| | ||| || | ||| | | || |
Sbjct 6140 TCGTATCTCCAAGTCTGCTGGCGGTGTTGGCGTTGCTGCTCAAAAGATTCGTG-GC---T 6085
Query 104498 AAATCTCGTAT-TCG-GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCG 104555
||| ||| ||| || ||||| ||| || |||| |||||||||||||| | |
Sbjct 6084 CTGGCTCTTATATCGCAGGAACAAACGGTACCTCCAATGGCATTATTCCAATGCTCAGAG 6025
Query 104556 TATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGT---CG-AAAGGGATCTATC 104611
| ||||| | ||| || |||| ||| | |||| || || || || || | || |
Sbjct 6024 TCTTTAATGACACTGCTCGCTTTGTGACACAAGGAGGTGGTAAACGCAACGGTAACT-TT 5966
Query 104612 GCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAAC 104671
|| |||||| | || || ||||| | || | | || ||| | || ||||| |||
Sbjct 5965 GCTGTCTATATAGAACCTTGGCATGTCGACGTATTCGAATTCTTGGACTTGCGCAAGAAC 5906
Query 104672 CAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTC 104731
| |||| ||||| ||| ||||| | |||| | | ||| | || |||||
Sbjct 5905 AATGGTGCTGAGGAAATGCGCGCACGCGACTTGTTCTTGGGATTATGGGTGCCTGATCTT 5846
Query 104732 TTCATGAAG 104740
|||||| ||
Sbjct 5845 TTCATGGAG 5837
Score = 93.3 bits (102), Expect = 5e-14
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 105044 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA 105103
||||| ||||| | || || ||||| | ||||||| ||| || ||| |||||||||
Sbjct 5378 GCTGTCTGTAATTTGGCTTCTCTCGCTTTACCCAAGTTTGTCAATAGAGAAACAAAGACA 5319
Query 105104 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTT 105163
||||||| |||||| || || ||||||| ||| || || || || |||| ||
Sbjct 5318 TTTGATTTTGAAAAGCTTCATCAAGTTACCAAAGTAGTGACACGCAATCTGAACAAGGTC 5259
Query 105164 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 105222
|||||| || | ||| || ||||| || ||||| |||||| ||||||||||
Sbjct 5258 ATTGATGTCAACTATTATCCAGTTGAAGAGGCACGTAACAGCAATATGCGACACCGTCC 5200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583254653889320
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