Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq578 233 2e-56 seq657 120 3e-22 >seq578 Length=440600 Score = 233 bits (258), Expect = 2e-56 Identities = 413/602 (69%), Gaps = 0/602 (0%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 |||||| || | | ||||| || |||||||| ||||| || || |||||| | || Sbjct 115397 CCTCAGCACATGATTATGCGTGTTGCGGTCGGAATCCACGGTGATGACCTCGAGAAGGTT 115456 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 |||||| ||| | |||||| |||||| | |||||| ||||| ||||||| || ||| Sbjct 115457 ATCGAGACCTACAATCTGATGTCCCAGAAATACTTCACTCACGCCTCGCCGACTCTGTTC 115516 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 ||||||||||| | |||||| || | ||| ||||| | | ||||||||| ||| Sbjct 115517 AACGCCGGTACTCCTCAGCCGCAGCTGGCCTCCTGCTTCCTTATCGATATGAAGGAGGAC 115576 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 ||||||||||| ||||| || || | ||| || || ||||||||| | || Sbjct 115577 AGCATTGAGGGTATCTATGACACCTTGAAGACTTGTGCCATGATCTCCAAGACTGCGGGT 115636 Query 19343 GGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAAC 19402 ||||| || || || | |||||| | | ||| | ||| ||| || ||| Sbjct 115637 GGTATTGGTCTCAACGTCCACCGTATCCGTGCTACAGGTTCTTACATCGGTGGTACTAAC 115696 Query 19403 GGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTC 19462 ||| || |||| | ||||| ||||| || || ||||||||||| || || ||||| Sbjct 115697 GGAACTTCCAACGGGCTTGTCCCTATGCTTCGAGTGTTCAACAACACTGCAAGATACGTT 115756 Query 19463 AACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCG 19522 ||||||| || ||| ||| || | ||||| |||||||| ||||| |||||| | Sbjct 115757 GACCAGGGCGGGAACAAGCGCCCTGGTGCTTTCGCTATCTACCTGGAGCCCTGGCACTCC 115816 Query 19523 GACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGC 19582 ||| || | || ||| | || || ||| |||||| ||| | || ||| | | || Sbjct 115817 GACATCTTTGAGTTCTTGGACCTTCGCAAGAACCACGGTAAGGAAGAGGTCAGAGCACGT 115876 Query 19583 GACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAA 19642 ||||||||| ||| | |||| ||| || || |||||| || |||||| ||| Sbjct 115877 GACCTCTTCTATGCCCTCTGGACTCCCGATCTCTTCATGAAGCGTGTTGAGTCTAACGGT 115936 Query 19643 GAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCG 19702 || ||| ||| | ||||| | || || || || | || ||||| ||||| | | Sbjct 115937 GACTGGACCCTATTCTGCCCAAATGAGGCTCCCGGTCTTTCTGATGTCTATGGCGATGAG 115996 Query 19703 TT 19704 || Sbjct 115997 TT 115998 Score = 226 bits (250), Expect = 3e-54 Identities = 401/583 (69%), Gaps = 4/583 (1%) Strand=Plus/Minus Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 || ||||||||||| | || || || ||| | ||||| | ||| |||||| || Sbjct 115992 TCGCCATAGACATCAGAAAGACCGGGAGCCTCATTTGGGCAGAATAGGGTCCAGTCACCG 115933 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | |||||| || ||||||||| || || |||| ||||| ||||||||| || Sbjct 115932 TTAGACTCAACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGCATAGAAGAGGTCACGT 115873 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 | | ||| || | || |||||| || || || | || || | |||||||| | Sbjct 115872 GCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAGATGTCGGAG 115813 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||| |||||||| ||||| ||||| | ||| ||||||| |||||||||| ||| Sbjct 115812 TGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGCCCTGGTCAACG 115753 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTC 79605 || | || ||||||||||| ||||| ||||| || || | |||| || ||||| Sbjct 115752 TATCTTGCAGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGGAAGTTCCGTTA 115693 Query 79606 GTCCCGTTGATTCGTGTACCGCTCGCCCGAAT--GTTCGAGCAGTGGATTCCGATGCCCC 79663 || || ||| | ||| | || || || | | || || || || || || | Sbjct 115692 GTACCACCGATGTAAGAACCTGTAGCACGGATACGGTGGA--CGTTGAGACCAATACCAC 115635 Query 79664 CGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGT 79723 | | ||||||||| || || ||| | || || ||||| ||||| || || Sbjct 115634 CCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACCCTCAATGCTGT 115575 Query 79724 CGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGA 79783 | ||||||||| ||| ||||||||| | || ||| || | ||||||||||||| Sbjct 115574 CCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGTACCGGCGTTGA 115515 Query 79784 AGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGA 79843 | || ||||||| ||||| |||||| | || ||| |||||||| ||| ||||| | | Sbjct 115514 ACAGAGTCGGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTAGGTCTCGATAA 115455 Query 79844 CGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886 | | |||||| || |||||||| |||||||| || ||||| Sbjct 115454 CCTTCTCGAGGTCATCACCGTGGATTCCGACCGCAACACGCAT 115412 Score = 149 bits (164), Expect = 7e-31 Identities = 677/1059 (64%), Gaps = 31/1059 (3%) Strand=Plus/Minus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 ||||||||||| ||||| |||||| |||||||||| | ||||||||| | | |||| Sbjct 117169 TAGTACATGCCGGTCTTCAGACCCATCTTCCATCCAGCGAAGTGCATACTGGTGATCTTG 117110 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 ||| | | || | | |||| |||||| || ||||| |||||||| |||||||| || Sbjct 117109 CCCATAGTAGGCTCCCTCATGTGGATGTTAAGGGACTGAGACTGGTCAATGTACGCGCCA 117050 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378 ||||| || ||||| | | || | || | || ||||| | ||| ||| | Sbjct 117049 CGGTCTGCAGCCATCTGAAGGATGGTACGCTGAGAGATTTCCCACACAGTCTTGTACAGA 116990 Query 78379 GCCTTCAGCTCTTCCTGGATGTCCAG--CGCT-TGTACGCTCCCACCGGCTCGCACAAT- 78434 ||||| | || | | |||| | | | || ||| || || |||| |||| Sbjct 116989 GCCTTGATGTCGGCAGGAATGTTGGGGATGTTCTGGACGGAACCTCC--CTCG-GCAATG 116933 Query 78435 -TTC-ATTCTTAAT-TTG--AGGGTTCCAG-CGATTGATCTTCTGAAGATCCCGGACCAG 78488 | | ||||| || ||| || | || ||| | || | |||||| | ||| Sbjct 116932 ATACGGTTCTTCATGTTGTCAGACCACAAGCCGA--GGTCGAC--GAGATCCTTCAGCAG 116877 Query 78489 GTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGT 78548 |||||| | |||||| || || ||| || || ||||||||| | || Sbjct 116876 CCAAGGGTTAACGACCTGGAACTCTCCCGCAAGGACACGACGAGAGTAGATGTTCGAAGT 116817 Query 78549 GTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGG 78608 ||| || ||||| |||||| |||| |||||| ||| ||| || |||||||| Sbjct 116816 GTATGGTTCGAAGCATTCGTTGAAGCCCAGGATCTGACTGGTACTGGCCGTGGGCATGGG 116757 Query 78609 TGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAG------GCC 78662 || || || | || || | ||||||| | ||||| |||| || | Sbjct 116756 AGCAACGAGCAAGCTGTTGCGGACACCATGCTTGGCAATCTCCGCCTTCAGTGAACTCCA 116697 Query 78663 GTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGC 78722 |||||||| ||| | | | | |||||||||| |||||||| |||| || Sbjct 116696 GTCCCAAAGGTCAGTAGGGGTCTTGTCCCACATGTCGTACTGAAGGATGCCCTGAGAGAT 116637 Query 78723 CGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAG 78782 || || || | | | ||| | |||| ||||||||| |||||| || | Sbjct 116636 GGGAGAGCCTTCATAAGAGGAGTATGTGCCCTGCTCCTTGGCAAGTTCGACGGATGCAGT 116577 Query 78783 CAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTC 78842 || || ||||||| | | ||| ||||| ||||||||| |||| | Sbjct 116576 CAAAGCACCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGCTGCTTGGCCTCCGGAGA 116517 Query 78843 GTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGAT 78902 |||||||| || | ||| || |||| | || || || || | || || | || || Sbjct 116516 GTCGAACGGCAGACGGAGAGCCAGGAAGGCGTCAGCAAGACCGTTAACACCAACGGCAAT 116457 Query 78903 CGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGAT 78962 || |||||||||| ||||||||| |||| || ||||| |||| ||||| Sbjct 116456 GGGGCGGTGGCGCAAGTTGCTCTTCTTGGCCTCCGGAACGGGGTAGTAGTTGATGTCGAT 116397 Query 78963 GACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAA 79022 | ||||||||| || || ||| | || || || | || | || | || || | Sbjct 116396 AATCTTGTTCAGGTTGCGAACCACAACCTGGGTGACTTCATGCAGTCTGCCAAAGTCGTA 116337 Query 79023 ------ATGATTTCCTTTGATGAAAGTCGGTAG-GCACAGCGATGCCAGGTTGCACACGG 79075 | || | | | |||||| || || ||| || || |||| |||||| |||| Sbjct 116336 CTCGCCACGAGCAGCATCAACGAAAGTGGGCAGAGCA-AGAGAGGCCAAGTTGCAAACGG 116278 Query 79076 CCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGG 79135 | ||| || ||| || ||||||||| || ||||| | ||||| ||| | Sbjct 116277 CGACCTCATCGGGGGCAGTGTACTCGATGATCTCAGTGCAGAGGTTAGAGCTGCGGATAG 116218 Query 79136 TGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCG 79195 | || | |||||||||||||||||||| ||| || || |||||||| |||| | || Sbjct 116217 TACCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCACGCATCCTTGTACAGCATGAAGGGGT 116158 Query 79196 TCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGA 79234 | |||||||| ||| || ||||| | | | ||||| Sbjct 116157 TACCGGTCTCGGTCTGGGCCTCGAGAATGGCATACCAGA 116119 >seq657 Length=446211 Score = 120 bits (132), Expect = 3e-22 Identities = 291/431 (68%), Gaps = 30/431 (7%) Strand=Plus/Minus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 || || || ||||||||||||||||| ||| |||| |||||||| || ||||||||| Sbjct 212202 GTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATCTTCTGGCTGAAGAAGCGTGGC 212143 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAG 60122 |||||||| || |||| ||||| ||||||||||| || || || ||||| || || Sbjct 212142 CTCATGCCTGGTCTGACCTTCTCTAACGAGCTGATCTCTCGTGATGAGGGTCTGCACACC 212083 Query 60123 GAGTTTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAATGCCCTTCCAAGGATATTCA 60181 || || || || | ||| | || |||| || | || |||| || || || Sbjct 212082 GACTTCGC-TTGTCTGCTGTTCTCCCACC---TGAACAACCGCCCCTCACCTGAGGTTGT 212027 Query 60182 CAAGATTGTTCAGTGGGCTTG-TGAAGTGGA----GAGC--GAGTTCATCACAGAAGCGC 60234 | ||| | ||| | ||| || || || |||| |||||| | || || || | Sbjct 212026 CGAGA-AGATCATCG---TTGATGCCGTCGACATTGAGCAGGAGTTCCTGACGGACGCCC 211971 Query 60235 TTCC--ATGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGT 60292 | || ||| ||| | |||||| || | ||| |||||||| |||| || Sbjct 211970 TCCCCGTTGC--CCTCCTTGGTATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTCGT 211913 Query 60293 CGCGGACCGCCTCATGGCCCAGTTTGG-----AGAAGGACCAATTTACGGCGTGAATAAC 60347 || |||||||| ||| | |||| ||||| || ||| || | ||| Sbjct 211912 TGCCGACCGCCTGCTGGTCTCTCTTGGCAACAAGAAGTAC-----TACAACGCCACAAAC 211858 Query 60348 CCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGG 60407 || ||||||| ||||| | ||||||| | | || |||||||||||||| |||||||| Sbjct 211857 CCCTTCGACTTCATGGACAACATCTCGCTCGCTGGCAAGACCAACTTCTTCGAGAAGCGT 211798 Query 60408 GTCGGGGATTA 60418 ||||| || || Sbjct 211797 GTCGGTGACTA 211787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548519019919920