Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq578 188 8e-43 seq794 114 1e-20 seq744 105 7e-18 seq723 105 7e-18 seq657 89.7 6e-13 >seq578 Length=440600 Score = 188 bits (208), Expect = 8e-43 Identities = 397/590 (67%), Gaps = 4/590 (1%) Strand=Plus/Plus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||||| || || | || ||||||||||| ||| | | || ||||| ||| | Sbjct 115412 ATGCGTGTTGCGGTCGGAATCCACGGTGATGACCTCGAGAAGGTTATCGAGACCTACAAT 115471 Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314 | ||| ||| || ||||| || |||||| |||| || ||||||||||| ||||| | Sbjct 115472 CTGATGTCCCAGAAATACTTCACTCACGCCTCGCCGACTCTGTTCAACGCCGGTACTCCT 115531 Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374 || || ||| || | ||||||||| | | |||||||| ||| || || || ||| Sbjct 115532 CAGCCGCAGCTGGCCTCCTGCTTCCTTATCGATATGAAGGAGGACAGCATTGAGGGTATC 115591 Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 || || || | ||| |||||| ||||||||| |||||||||| ||| || || Sbjct 115592 TATGACACCTTGAAGACTTGTGCCATGATCTCCAAGACTGCGGGTGGTATTGGTCTCAAC 115651 Query 53435 TGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 || | ||| |||||| | || | ||| || || ||||| || | | Sbjct 115652 G--TCCACCGTATCCGTGCTACAGGTTCTTACATCGGTGGTACTAACGGAACTTCCAACG 115709 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 | | || |||||||| || || ||||||||||| || | ||||| ||||||| || Sbjct 115710 GGCTTGTCCCTATGCTTCGAGTGTTCAACAACACTGCAAGATACGTTGACCAGGGCGGGA 115769 Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612 |||||| || | ||||| |||||||| ||||| |||||| ||||||| | |||| Sbjct 115770 ACAAGCGCCCTGGTGCTTTCGCTATCTACCTGGAGCCCTGGCACTCCGACATCTTTGAGT 115829 Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAG 53672 | | || || || ||| || ||| | |||||| | | |||||||| || | Sbjct 115830 TCTTGGACCTTCGCAAGAACCACGGTAAGGAAGAGGTCAGAGCACGTGACCTCTTCTATG 115889 Query 53673 CTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGA 53732 | || |||| ||| || ||||||||| | || ||| ||| || ||| ||| Sbjct 115890 CCCTCTGGACTCCCGATCTCTTCATGAAGCGTGTTGAGTCTAACGGTGACTGGACCCTAT 115949 Query 53733 TGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTT 53782 | ||||| || ||| ||||| || | |||||| || || |||||| Sbjct 115950 TCTGCCCAAATGAGGCTCCCGGTCTTTCTGATGTCTATGGCGATGAGTTT 115999 >seq794 Length=240852 Score = 114 bits (126), Expect = 1e-20 Identities = 294/445 (66%), Gaps = 2/445 (0%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 ||||| |||||||| || ||||| || || |||||||||||||||||||| ||||||| | Sbjct 19420 CCAGTACCGATACCATCCGCACCGTTGATGAGAATCATCGGCACGACAGGCACGTAGATC 19479 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || ||||| | || | |||||||| | ||| | || | | | ||| | Sbjct 19480 TCGGGCTCGATCTTCTTGCCGTCGTCAACGTTGTATGTCAGAAGTGGTTCATCAGCGGTG 19539 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 | |||||| | ||| |||| | | ||| || | || ||||||| || ||| Sbjct 19540 TGGAATATCCGCCTGGCAAACGGGGACAAGCGTGTATAGATATAACGAGCACTAGCACAG 19599 Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391 || ||||| |||||| |||| || | ||||| || |||| | ||| | ||| Sbjct 19600 TCGGCACCACCTTGAAGACGACTACCAAAGTTACCACTGGGTTCCAGGCAGTTGATGTTA 19659 Query 117392 TTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCA 117451 |||| || || ||| | || || | |||||| || ||| ||| || ||||| Sbjct 19660 TTGGATCCGACGAAGGTCTGTGCGAGACCGACAATAGTCTGTTGCAGGGACGTATCACCG 19719 Query 117452 TGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGT-CTGA 117510 || || || | ||| | | |||| || ||||| | | | ||||| || | || Sbjct 19720 TGCTGGTATCCAGTCATTCCAGAAACGTGACCAGCCAGTTCAACGACCTTGATATCCTTG 19779 Query 117511 CGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATC 117570 || | ||| | || | |||| || | ||||||||||||| ||| |||||||| || Sbjct 19780 CGGATGTTTCGT-TTAAAACAGGTGTACAGGACCTTGCGCTGACCTGGTTTCAGACCGTC 19838 Query 117571 CGCCACGTGAGGGATCGAACGCTTG 117595 | | || ||| || || ||| || Sbjct 19839 CACAACAGAAGGAATGGATCGCATG 19863 Score = 109 bits (120), Expect = 6e-19 Identities = 294/447 (66%), Gaps = 2/447 (0%) Strand=Plus/Plus Query 151874 ATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAA 151933 |||| |||||||| || || |||||||||| |||||||||||||| | ||| |||| | Sbjct 19418 ATCCAGTACCGATACCATCCGCACCGTTGATGAGAATCATCGGCACGACAGGCACGTAGA 19477 Query 151934 ACTCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCG 151993 ||| ||||| | || | ||||| || | |||| ||| || | | ||||| | Sbjct 19478 TCTCGGGCTCGATCTTCTTGCCGTCGTCAACGTTGTATGTCAGAAGTGGTTCATCAGCGG 19537 Query 151994 GATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCG 152053 | ||||||||| | | | || ||| || || |||| || || | || || Sbjct 19538 TGTGGAATATCCGCCTGGCAAACGGGGACAAGCGTGTATAGATATAACGAGCACTAGCAC 19597 Query 152054 CATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGT 152113 || |||||| || || | ||||| | ||| ||| || ||| ||||| || Sbjct 19598 AGTCGGCACCACCTTGAAGACGACTACCAAAGTTACCACTGGGTTCCAGGCAGTTGATGT 19657 Query 152114 TGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCAC 152173 | |||| || ||||| |||| || | | ||||| || ||||| || |||| Sbjct 19658 TATTGGATCCGACGAAGGTCTGTGCGAGACCGACAATAGTCTGTTGCAGGGACGTATCAC 19717 Query 152174 CGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCG 152233 |||| || || | ||| | | | || || |||| | | ||||| || ||| Sbjct 19718 CGTGCTGGTATCCAGTCATTCCAGAAACGTGACCAGCCAGTTCAACGACCTTGATATCCT 19777 Query 152234 T-CGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCG 152292 | || | ||| | || | ||||| ||| | ||||||||||| |||||||| |||| Sbjct 19778 TGCGGATGTTTCGT-TTAAAACAGGTGTACAGGACCTTGCGCTGACCTGGTTTCAGACCG 19836 Query 152293 TCCACCACGTGAGGAATCGAACGCTTG 152319 ||||| || |||||| || ||| || Sbjct 19837 TCCACAACAGAAGGAATGGATCGCATG 19863 >seq744 Length=38458 Score = 105 bits (116), Expect = 7e-18 Identities = 196/288 (68%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||||||||| | | ||||||||||| || | | |||||||| | ||||| || Sbjct 30853 GCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAAACCACGTTT 30912 Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 ||| | |||||| |||| | ||||||||| |||||| || ||||||||| ||||| Sbjct 30913 CTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGACAGCAGCAAA 30972 Query 74888 GGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTCATCCAAGTCTGAGCCCATTCAGC 74947 ||| ||||| || | || || | | | || | ||||| | ||||| ||||| Sbjct 30973 GGCAACAAGACGCTCAGCAAAAGAACCGTTAGAGGAAATCCACTTGAAGGCCCAATCAGC 31032 Query 74948 TTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGG 75007 |||| ||||| ||||| ||| || || || ||||| || | ||||||| | Sbjct 31033 CTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCTTTCTCTTGGTT 31092 Query 75008 ATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAAT 75055 ||| |||| ||||||||| ||| ||| || || | ||||| Sbjct 31093 ATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAAT 31140 >seq723 Length=18298 Score = 105 bits (116), Expect = 7e-18 Identities = 266/402 (66%), Gaps = 2/402 (0%) Strand=Plus/Minus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 || |||||||| || || || || || |||||||||||||||| | | ||||| || Sbjct 6271 AAATACTTTACTCATGCTACACCTACATTGTTCAACGCTGGTACACCTAAACCTCAATTG 6212 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 || || |||||||| || ||||| || ||| ||||| ||||||||||| || || Sbjct 6211 TCTAGTTGCTTCCTTGTTCAAATGAAAGAGGACAGTATCGAAGGCATCTACGATACTATC 6152 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACG-T 53445 | |||||| | |||||||||| | || ||| | || | |||||| || | | Sbjct 6151 ACCACGTGTGCTCGTATCTCCAAGTCTGCTGGCGGTGTTGGCGT-TGCTGCTCAAAAGAT 6093 Query 53446 CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTAT 53505 |||| ||| | ||| || || ||||| | || |||| || | || || Sbjct 6092 TCGTGGCTCTGGCTCTTATATCGCAGGAACAAACGGTACCTCCAATGGCATTATTCCAAT 6033 Query 53506 GCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGG 53565 |||| | ||||| || |||| || || | || | || || ||||| || ||||| || Sbjct 6032 GCTCAGAGTCTTTAATGACACTGCTCGCTTTGTGACACAAGGAGGTGGTAAACGCAACGG 5973 Query 53566 GTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCG 53625 || || |||| | || || ||||| | |||| | | || || | || |||| Sbjct 5972 TAACTTTGCTGTCTATATAGAACCTTGGCATGTCGACGTATTCGAATTCTTGGACTTGCG 5913 Query 53626 TCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT 53667 ||| | |||| || || |||||| || ||| |||| Sbjct 5912 CAAGAACAATGGTGCTGAGGAAATGCGCGCACGCGACTTGTT 5871 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 55726 TCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAG 55785 |||||| || | ||| || || ||||||||| |||| | | | | ||||||||| Sbjct 4619 TCTCAAAAAGCTATACAAAACAGTATGGGAGATTTCACAAAGAACTATTATTGACATGGC 4560 Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCA-TGGAGAATC 55844 |||||| | || || | |||||||| || || ||| |||| | || | || ||| | Sbjct 4559 CGCTGATAGAGGAGCTTTTATCGACCAATCTCAATCTATGAATTTGTTTACTGCCGAACC 4500 Query 55845 CTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGG 55904 | |||| || |||| ||| ||||||||||| | |||||||||||| | ||||| | Sbjct 4499 AAACTTTGGCAAA-TTGACCTCTATGCACTTTTATGCCTGGAAGAAGGGATTAAAGACTG 4441 Query 55905 GTATGTACTATCTG 55918 | ||||||||| || Sbjct 4440 GCATGTACTATTTG 4427 >seq657 Length=446211 Score = 89.7 bits (98), Expect = 6e-13 Identities = 181/266 (68%), Gaps = 7/266 (3%) Strand=Plus/Plus Query 75005 GGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTT 75064 ||| ||||||| | |||| || | ||| ||||| ||||| || || || ||| | Sbjct 212391 GGGCTCCTTGATGTAGGTGTCGATGAGAAGGGAGTATGTCTCGGAGTGGATGTTCTCCAT 212450 Query 75065 GAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATC--CTTTGAAAAA 75122 | |||| | ||||||| | || ||||| | | ||| || || | ||||| Sbjct 212451 CATGATCTGGAAACCGTAGAAGCAACGAGCCTCAGGGACCTGGACCTCGCCACTGAAACG 212510 Query 75123 TTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATT 75182 || | ||| ||||| ||||||||||||| || |||||||| |||||||| || Sbjct 212511 CTC--GACGAGGTTCTCGTTGACGATGCCGTCAGACGCGGCGAAGAAAGCCAGGACATGG 212568 Query 75183 TTGATAAAGTGGCGCTCATCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGCC 75239 ||| |||| |||||| || | ||| | |||| ||| || | ||||||| | | Sbjct 212569 GAGATGAAGTAGCGCTCGTCATTGTTGAGGCGGTTGTTCCAGTCGTGCAGGTCCTTGGAC 212628 Query 75240 AAATCAATCTCCTCGACCGTCCAGAA 75265 | ||| |||||||| | |||||||| Sbjct 212629 AGATCGATCTCCTCAGCAGTCCAGAA 212654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547210233711400