Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq812 159 4e-34
seq578 140 4e-28
seq810 116 4e-21
seq657 113 5e-20
seq799 107 2e-18
seq794 105 8e-18
seq723 102 9e-17
seq609 96.9 4e-15
>seq812
Length=913560
Score = 159 bits (176), Expect = 4e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| | || ||||||||||| || | |||||||| || |
Sbjct 528751 ATGCAGATTTTTGTTAAGACTTTGACTGGCAAGACTATCACATTGGAGGTTGAATCCAGC 528692
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || ||||| || ||||| |||||||| || || ||||| ||||||
Sbjct 528691 GACACAATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAG 528632
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || |||||||||||||| || ||||| | ||||||| | | ||||| ||
Sbjct 528631 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGTACCTTGTCCGACTACAAC 528572
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||| |||||||| || || || || || |||| || || ||||||
Sbjct 528571 ATCCAGAAGGAATCTACCCTGCACCTGGTTCTGCGACTCCGTGGTGGA 528524
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| ||||| || |||||||| || || |||||||||||
Sbjct 529207 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 529148
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| || || ||||| |||||||| || ||||| ||||||
Sbjct 529147 GACACCATCGACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCCGACCAG 529088
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| || || ||||| ||||| || ||||||| || || || | ||||| ||
Sbjct 529087 CAACGTCTGATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACACTCTCCGACTACAAC 529028
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || ||||| || ||| |||| || || || ||
Sbjct 529027 ATCCAGAAGGAGTCGACCCTTCACCTCGTCCTGCGCCTCCGTGGAGG 528981
Score = 134 bits (148), Expect = 2e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || |||||||||||||||||||| || || || ||
Sbjct 528979 ATGCAGATTTTCGTCAAGACTCTGACCGGCAAGACTATTACTCTGGAAGTCGAATCGTCA 528920
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | ||| || || || || || || || || ||||| ||||||
Sbjct 528919 GATACCATCGATAACGTCAAGAGCAAGATCCAAGATAAAGAAGGCATCCCTCCCGACCAG 528860
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || |||||||||||||| | || |||| || ||| | | || || ||
Sbjct 528859 CAGCGTCTTATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGCACCTTGTCCGATTACAAC 528800
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || ||||| || || ||| | || || || |||||
Sbjct 528799 ATTCAGAAGGAGTCTACTCTCCACCTTGTCCTCCGCCTGCGTGGTGG 528753
Score = 123 bits (136), Expect = 3e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| || ||||| || || || ||||| ||||| || | ||| | || | |||
Sbjct 529411 ACTGGAAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAGAGC 529352
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || |||||||||||||| || ||||| |||||||||||||| || || ||||| |||
Sbjct 529351 AAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTCATCTTCGCTGGAAAG 529292
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || ||||| | ||| || || | ||||| || |||| ||||| ||||| || ||
Sbjct 529291 CAGCTTGAGGACGGTCGCACGCTCTCTGACTACAACATCCAGAAGGAGTCCACCCTGCAC 529232
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| || | |||||||| || ||
Sbjct 529231 CTGGTGCTCCGTCTTCGTGGAGG 529209
>seq578
Length=440600
Score = 140 bits (154), Expect = 4e-28
Identities = 269/393 (68%), Gaps = 8/393 (2%)
Strand=Plus/Minus
Query 80715 CATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA 80774
|| ||| ||||||| || || | ||| || | ||| || |||||||||||| ||| |
Sbjct 116495 CAGGAAGGCGTCAGCAAGACCGTTAACACCAACGGCAATGGGGCGGTGGCGCAAGTT-GC 116437
Query 80775 TCG-CTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTG 80833
|| || ||||||||||| ||||| |||| | ||||| | ||||||||||||
Sbjct 116436 TCTTCTTGGCCTCCGGAACGGGGTAGTAGTTGATGTCGATAATCTTGTTCAGGTTGCGAA 116377
Query 80834 TAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCC-----CTTCA- 80887
|||||| | || || ||||| ||| | ||||||| | | | | | |||
Sbjct 116376 CCACAACCTGGGTGACTTCATGCAGTCTGCCAAAGTCGTACTCGCCACGAGCAGCATCAA 116317
Query 80888 CAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAA 80947
| || | || || || || |||| ||||| ||||| ||||| || | | ||
Sbjct 116316 CGAAAGTGGGCAGAGCAAGAGAGGCCAAGTTGCAAACGGCGACCTCATCGGGGGCAGTGT 116257
Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007
|||||| ||| || ||||| | ||||| || ||||||||||| ||||||||
Sbjct 116256 ACTCGATGATCTCAGTGCAGAGGTTAGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGC 116197
Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067
||| |||||| || |||||||| |||| | ||| ||||||||||| ||| | ||
Sbjct 116196 TCTTCTTGTTGCACGCATCCTTGTACAGCATGAAGGGGTTACCGGTCTCGGTCTGGGCCT 116137
Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCCTTGA 81100
||| ||||| | ||| | || | |||||||
Sbjct 116136 CGAGAATGGCATACCAGAGCTTCTGAGCCTTGA 116104
>seq810
Length=1034423
Score = 116 bits (128), Expect = 4e-21
Identities = 139/186 (75%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| |||||||| || || || ||||| ||||| || || || ||||| || | ||
Sbjct 582830 CTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGTCCGACACGAT 582889
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| || | ||||| || || |||||||||||||| ||||| || ||||||||||||||
Sbjct 582890 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCT 582949
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592
|| || || || ||||| ||||| |||| || || || ||| ||||| || |||| |
Sbjct 582950 GATCTTCGCCGGAAAGCAGCTCGAAGATGGCCGCACTCTGAGC-GACTACAACATCCAGA 583008
Query 27593 AGGAAT 27598
||| ||
Sbjct 583009 AGGTAT 583014
>seq657
Length=446211
Score = 113 bits (124), Expect = 5e-20
Identities = 329/499 (66%), Gaps = 11/499 (2%)
Strand=Plus/Minus
Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGATGAAT--CGTGG-GTCGTCGTTTGGTCAGCGT 64719
|| ||||| || |||||||| || ||||| | | || ||| | || | |||||
Sbjct 212280 AAGAAGGCCGACTGGGCCATTCGCTGGATCCAGGACAAGGAGTCCACTTTCGCCCAGCGC 212221
Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779
| | || || || ||| || || || ||||| ||||| || ||| ||||| |||
Sbjct 212220 TTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATCTTC 212161
Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839
||||| || ||||| ||||| ||||| |||||| | || || |||||||||||||||||
Sbjct 212160 TGGCTGAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCTAACGAGCTGATCTCTCGT 212101
Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAGGACAAACCA 64899
|| ||||| || ||| || || || | |||||| |||||| || || ||
Sbjct 212100 GATGAGGGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTCCCACCTGAACAACCGCCCC 212041
Query 64900 TCACATGGGACTAT--AATTGAT-ATAGTAAAATCGGCTGTAGAAATTGAAAAGGAATTC 64956
|||| || | | | | ||| || || | || || || ||||| |||| |||
Sbjct 212040 TCACCTGAGGTTGTCGAGAAGATCATCGTTGA---TGCCGTCGACATTGAGCAGGAGTTC 211984
Query 64957 ATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAGTAT 65016
| || | ||| || || | ||| | || ||| | || | ||| |||||
Sbjct 211983 CTGACGGACGCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCAAGCTCATGTGCCAGTAC 211924
Query 65017 ATCGAATTTGTAGCAGATCGCCTGCT-TACTCAGTTTGGTATTAAGCCCTACTGGAATTC 65075
||||| || || || || |||||||| ||| |||| | ||| |||| || |
Sbjct 211923 ATCGAGTTCGTTGCCGACCGCCTGCTGGTCTC-TCTTGGCAACAAGAAGTACTACAACGC 211865
Query 65076 TTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTTGA 65135
|||| || || |||| ||||| | ||| || | || ||||| ||||| || ||
Sbjct 211864 CACAAACCCCTTCGACTTCATGGACAACATCTCGCTCGCTGGCAAGACCAACTTCTTCGA 211805
Query 65136 AAAGAGGGTAGGTGATTAC 65154
||| | || ||||| |||
Sbjct 211804 GAAGCGTGTCGGTGACTAC 211786
>seq799
Length=343686
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| || || || |||||||||||||| || || ||||||||||| ||||||
Sbjct 28898 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAG 28839
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | ||| || || | ||||| || |||| ||||| || || ||||| || || |
Sbjct 28838 GACGGTCGCACTCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 28779
Query 27619 CGTCTTCGCGGTGG 27632
|| || || |||||
Sbjct 28778 CGCCTGCGTGGTGG 28765
>seq794
Length=240852
Score = 105 bits (116), Expect = 8e-18
Identities = 227/334 (68%), Gaps = 4/334 (1%)
Strand=Plus/Minus
Query 31207 CCGAAGCTCGACGACGCCAACTGGGCCGGTACCCACAAGTCGCACGAGTGCACGCTTATT 31266
|| |||||| || || ||| |||||| ||| | | ||| | || || || ||
Sbjct 20654 CCCAAGCTCACTGATGCTAACAAGGCCGGAACCAAGGAAGGACACCACTGTACACTGATC 20595
Query 31267 ATTACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGGCTTGAG-TGTTGTGGGGCG 31325
| || || ||||| || || |||| || ||||| || || | ||| ||| || ||||
Sbjct 20594 CTGACGGAAGGTGATTCTGCCAAGGGTCTGGCTATGGCCGG-TAGAGCTGTCGTCGGGCC 20536
Query 31326 CAATGCGTTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGTGACGCCTCCGT 31385
|| |||||| || || || || |||| || | || || ||||| || |||||| |
Sbjct 20535 TGATCTGTTCGGTGTATTCCCCCTGAGAGGAAAACTGCTCAATGTTCGCGATGCCTCCAT 20476
Query 31386 TAAACAGGTTACGGATAATGAAGAGTTTTCCAACCTGAAAAAGATCCTCGGGCTTCAGCA 31445
| | ||| || | | || | ||| || || | || || |||| || || |||||
Sbjct 20475 TGACCAGATTTCCAAGAACGCGGAGATTCAGAATATTAAGAACTTCCTTGGTCTCCAGCA 20416
Query 31446 TGGCAAGGTATATAATT-CACTGAGAGAATTGCGGTACGGTCGCCTCATGATTATGACCG 31504
|||| ||||| |||| || | | || || |||| ||||||||||||||||
Sbjct 20415 CAAAAAGGAATATACCGACACT-AGGGGTCTCCGCTATGGTCATCTCATGATTATGACCG 20357
Query 31505 ACGCAGATCTCGACGGCAGTCACATCAAGGGTCT 31538
| ||||| |||||| ||||||||||| |||||
Sbjct 20356 ATCAAGATCACGACGGTAGTCACATCAAAGGTCT 20323
>seq723
Length=18298
Score = 102 bits (112), Expect = 9e-17
Identities = 129/175 (74%), Gaps = 2/175 (1%)
Strand=Plus/Plus
Query 80043 CAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAG 80102
|| |||||||||||| ||||| | |||||||||||| | || | ||||||||| | |
Sbjct 4427 CAAATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAA 4486
Query 80103 CTTCGCAAGTGTGGGGTTCTCCA-TGAAGATGTTCAGAGACTGAGACTGACAGATGAAAG 80161
|| ||| || ||||| || | || | |||| ||| ||||| || ||| ||||
Sbjct 4487 TTTGCCAAA-GTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAG 4545
Query 80162 CCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGT 80216
| || | ||| || ||||| |||||||| | |||||| ||| |||||||||||
Sbjct 4546 CTCCTCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGT 4600
>seq609
Length=32548
Score = 96.9 bits (106), Expect = 4e-15
Identities = 122/168 (73%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||||| ||| | ||| || || || || ||||| || || ||||| || ||
Sbjct 20852 TGACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCA 20911
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| ||||| ||||| || ||||| |||||||| || | ||||||| | || || ||
Sbjct 20912 ACAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAA 20971
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||||||||| || ||||| | || | |||||||| |||||
Sbjct 20972 CATTCAAAAGGAATCTACCCTTCACTTGGTTCTCCGTCTTCGTGGTGG 21019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570304390354160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |