Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq812 159 4e-34 seq578 140 4e-28 seq810 116 4e-21 seq657 113 5e-20 seq799 107 2e-18 seq794 105 8e-18 seq723 102 9e-17 seq609 96.9 4e-15 >seq812 Length=913560 Score = 159 bits (176), Expect = 4e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| | || ||||||||||| || | |||||||| || | Sbjct 528751 ATGCAGATTTTTGTTAAGACTTTGACTGGCAAGACTATCACATTGGAGGTTGAATCCAGC 528692 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||| || ||||| |||||||| || || ||||| |||||| Sbjct 528691 GACACAATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAG 528632 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||||||||| || ||||| | ||||||| | | ||||| || Sbjct 528631 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGTACCTTGTCCGACTACAAC 528572 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| |||||||| || || || || || |||| || || |||||| Sbjct 528571 ATCCAGAAGGAATCTACCCTGCACCTGGTTCTGCGACTCCGTGGTGGA 528524 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| ||||| || |||||||| || || ||||||||||| Sbjct 529207 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 529148 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| || || ||||| |||||||| || ||||| |||||| Sbjct 529147 GACACCATCGACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCCGACCAG 529088 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || || ||||| ||||| || ||||||| || || || | ||||| || Sbjct 529087 CAACGTCTGATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACACTCTCCGACTACAAC 529028 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || ||||| || ||| |||| || || || || Sbjct 529027 ATCCAGAAGGAGTCGACCCTTCACCTCGTCCTGCGCCTCCGTGGAGG 528981 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || |||||||||||||||||||| || || || || Sbjct 528979 ATGCAGATTTTCGTCAAGACTCTGACCGGCAAGACTATTACTCTGGAAGTCGAATCGTCA 528920 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | ||| || || || || || || || || ||||| |||||| Sbjct 528919 GATACCATCGATAACGTCAAGAGCAAGATCCAAGATAAAGAAGGCATCCCTCCCGACCAG 528860 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||||||||| | || |||| || ||| | | || || || Sbjct 528859 CAGCGTCTTATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGCACCTTGTCCGATTACAAC 528800 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || ||||| || || ||| | || || || ||||| Sbjct 528799 ATTCAGAAGGAGTCTACTCTCCACCTTGTCCTCCGCCTGCGTGGTGG 528753 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || || ||||| || || || ||||| ||||| || | ||| | || | ||| Sbjct 529411 ACTGGAAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAGAGC 529352 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| || ||||| |||||||||||||| || || ||||| ||| Sbjct 529351 AAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTCATCTTCGCTGGAAAG 529292 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||| | ||| || || | ||||| || |||| ||||| ||||| || || Sbjct 529291 CAGCTTGAGGACGGTCGCACGCTCTCTGACTACAACATCCAGAAGGAGTCCACCCTGCAC 529232 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || | |||||||| || || Sbjct 529231 CTGGTGCTCCGTCTTCGTGGAGG 529209 >seq578 Length=440600 Score = 140 bits (154), Expect = 4e-28 Identities = 269/393 (68%), Gaps = 8/393 (2%) Strand=Plus/Minus Query 80715 CATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA 80774 || ||| ||||||| || || | ||| || | ||| || |||||||||||| ||| | Sbjct 116495 CAGGAAGGCGTCAGCAAGACCGTTAACACCAACGGCAATGGGGCGGTGGCGCAAGTT-GC 116437 Query 80775 TCG-CTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTG 80833 || || ||||||||||| ||||| |||| | ||||| | |||||||||||| Sbjct 116436 TCTTCTTGGCCTCCGGAACGGGGTAGTAGTTGATGTCGATAATCTTGTTCAGGTTGCGAA 116377 Query 80834 TAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCC-----CTTCA- 80887 |||||| | || || ||||| ||| | ||||||| | | | | | ||| Sbjct 116376 CCACAACCTGGGTGACTTCATGCAGTCTGCCAAAGTCGTACTCGCCACGAGCAGCATCAA 116317 Query 80888 CAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAA 80947 | || | || || || || |||| ||||| ||||| ||||| || | | || Sbjct 116316 CGAAAGTGGGCAGAGCAAGAGAGGCCAAGTTGCAAACGGCGACCTCATCGGGGGCAGTGT 116257 Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 |||||| ||| || ||||| | ||||| || ||||||||||| |||||||| Sbjct 116256 ACTCGATGATCTCAGTGCAGAGGTTAGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGC 116197 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 ||| |||||| || |||||||| |||| | ||| ||||||||||| ||| | || Sbjct 116196 TCTTCTTGTTGCACGCATCCTTGTACAGCATGAAGGGGTTACCGGTCTCGGTCTGGGCCT 116137 Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCCTTGA 81100 ||| ||||| | ||| | || | ||||||| Sbjct 116136 CGAGAATGGCATACCAGAGCTTCTGAGCCTTGA 116104 >seq810 Length=1034423 Score = 116 bits (128), Expect = 4e-21 Identities = 139/186 (75%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || || ||||| ||||| || || || ||||| || | || Sbjct 582830 CTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGTCCGACACGAT 582889 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | || | ||||| || || |||||||||||||| ||||| || |||||||||||||| Sbjct 582890 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCT 582949 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 || || || || ||||| ||||| |||| || || || ||| ||||| || |||| | Sbjct 582950 GATCTTCGCCGGAAAGCAGCTCGAAGATGGCCGCACTCTGAGC-GACTACAACATCCAGA 583008 Query 27593 AGGAAT 27598 ||| || Sbjct 583009 AGGTAT 583014 >seq657 Length=446211 Score = 113 bits (124), Expect = 5e-20 Identities = 329/499 (66%), Gaps = 11/499 (2%) Strand=Plus/Minus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGATGAAT--CGTGG-GTCGTCGTTTGGTCAGCGT 64719 || ||||| || |||||||| || ||||| | | || ||| | || | ||||| Sbjct 212280 AAGAAGGCCGACTGGGCCATTCGCTGGATCCAGGACAAGGAGTCCACTTTCGCCCAGCGC 212221 Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779 | | || || || ||| || || || ||||| ||||| || ||| ||||| ||| Sbjct 212220 TTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATCTTC 212161 Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839 ||||| || ||||| ||||| ||||| |||||| | || || ||||||||||||||||| Sbjct 212160 TGGCTGAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCTAACGAGCTGATCTCTCGT 212101 Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAGGACAAACCA 64899 || ||||| || ||| || || || | |||||| |||||| || || || Sbjct 212100 GATGAGGGTCTGCACACCGACTTCGCTTGTCTGCTGTTCTCCCACCTGAACAACCGCCCC 212041 Query 64900 TCACATGGGACTAT--AATTGAT-ATAGTAAAATCGGCTGTAGAAATTGAAAAGGAATTC 64956 |||| || | | | | ||| || || | || || || ||||| |||| ||| Sbjct 212040 TCACCTGAGGTTGTCGAGAAGATCATCGTTGA---TGCCGTCGACATTGAGCAGGAGTTC 211984 Query 64957 ATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAGTAT 65016 | || | ||| || || | ||| | || ||| | || | ||| ||||| Sbjct 211983 CTGACGGACGCCCTCCCCGTTGCCCTCCTTGGTATGAACTCCAAGCTCATGTGCCAGTAC 211924 Query 65017 ATCGAATTTGTAGCAGATCGCCTGCT-TACTCAGTTTGGTATTAAGCCCTACTGGAATTC 65075 ||||| || || || || |||||||| ||| |||| | ||| |||| || | Sbjct 211923 ATCGAGTTCGTTGCCGACCGCCTGCTGGTCTC-TCTTGGCAACAAGAAGTACTACAACGC 211865 Query 65076 TTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTTGA 65135 |||| || || |||| ||||| | ||| || | || ||||| ||||| || || Sbjct 211864 CACAAACCCCTTCGACTTCATGGACAACATCTCGCTCGCTGGCAAGACCAACTTCTTCGA 211805 Query 65136 AAAGAGGGTAGGTGATTAC 65154 ||| | || ||||| ||| Sbjct 211804 GAAGCGTGTCGGTGACTAC 211786 >seq799 Length=343686 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| || || || |||||||||||||| || || ||||||||||| |||||| Sbjct 28898 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAG 28839 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | ||| || || | ||||| || |||| ||||| || || ||||| || || | Sbjct 28838 GACGGTCGCACTCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 28779 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 28778 CGCCTGCGTGGTGG 28765 >seq794 Length=240852 Score = 105 bits (116), Expect = 8e-18 Identities = 227/334 (68%), Gaps = 4/334 (1%) Strand=Plus/Minus Query 31207 CCGAAGCTCGACGACGCCAACTGGGCCGGTACCCACAAGTCGCACGAGTGCACGCTTATT 31266 || |||||| || || ||| |||||| ||| | | ||| | || || || || Sbjct 20654 CCCAAGCTCACTGATGCTAACAAGGCCGGAACCAAGGAAGGACACCACTGTACACTGATC 20595 Query 31267 ATTACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGGCTTGAG-TGTTGTGGGGCG 31325 | || || ||||| || || |||| || ||||| || || | ||| ||| || |||| Sbjct 20594 CTGACGGAAGGTGATTCTGCCAAGGGTCTGGCTATGGCCGG-TAGAGCTGTCGTCGGGCC 20536 Query 31326 CAATGCGTTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGTGACGCCTCCGT 31385 || |||||| || || || || |||| || | || || ||||| || |||||| | Sbjct 20535 TGATCTGTTCGGTGTATTCCCCCTGAGAGGAAAACTGCTCAATGTTCGCGATGCCTCCAT 20476 Query 31386 TAAACAGGTTACGGATAATGAAGAGTTTTCCAACCTGAAAAAGATCCTCGGGCTTCAGCA 31445 | | ||| || | | || | ||| || || | || || |||| || || ||||| Sbjct 20475 TGACCAGATTTCCAAGAACGCGGAGATTCAGAATATTAAGAACTTCCTTGGTCTCCAGCA 20416 Query 31446 TGGCAAGGTATATAATT-CACTGAGAGAATTGCGGTACGGTCGCCTCATGATTATGACCG 31504 |||| ||||| |||| || | | || || |||| |||||||||||||||| Sbjct 20415 CAAAAAGGAATATACCGACACT-AGGGGTCTCCGCTATGGTCATCTCATGATTATGACCG 20357 Query 31505 ACGCAGATCTCGACGGCAGTCACATCAAGGGTCT 31538 | ||||| |||||| ||||||||||| ||||| Sbjct 20356 ATCAAGATCACGACGGTAGTCACATCAAAGGTCT 20323 >seq723 Length=18298 Score = 102 bits (112), Expect = 9e-17 Identities = 129/175 (74%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 80043 CAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAG 80102 || |||||||||||| ||||| | |||||||||||| | || | ||||||||| | | Sbjct 4427 CAAATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAA 4486 Query 80103 CTTCGCAAGTGTGGGGTTCTCCA-TGAAGATGTTCAGAGACTGAGACTGACAGATGAAAG 80161 || ||| || ||||| || | || | |||| ||| ||||| || ||| |||| Sbjct 4487 TTTGCCAAA-GTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAG 4545 Query 80162 CCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGT 80216 | || | ||| || ||||| |||||||| | |||||| ||| ||||||||||| Sbjct 4546 CTCCTCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGT 4600 >seq609 Length=32548 Score = 96.9 bits (106), Expect = 4e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||||| ||| | ||| || || || || ||||| || || ||||| || || Sbjct 20852 TGACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCA 20911 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||||| ||||| || ||||| |||||||| || | ||||||| | || || || Sbjct 20912 ACAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAA 20971 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||| || ||||| | || | |||||||| ||||| Sbjct 20972 CATTCAAAAGGAATCTACCCTTCACTTGGTTCTCCGTCTTCGTGGTGG 21019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570304390354160