Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq609 89.7 3e-13
seq812 86.0 4e-12
>seq609
Length=32548
Score = 89.7 bits (98), Expect = 3e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | ||||| || || || |||||||||||||| |||||
Sbjct 21019 CCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTC 20960
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || ||||||| |||||||||||||| || || | ||| ||||| || || ||
Sbjct 20959 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGG 20900
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTT 34628
| || ||||| ||| ||||||||| ||
Sbjct 20899 ATACCTTCCTTATCTTGGATCTTTTGCTT 20871
>seq812
Length=913560
Score = 86.0 bits (94), Expect = 4e-12
Identities = 145/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|||||||| |||||| |||||||| ||||| || | || || | ||||| | ||
Sbjct 528777 TGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCTTCCAACTGC 528836
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
||||| ||||| || | |||||| ||||| || || | || || || ||| ||||||
Sbjct 528837 TTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTGGATCTTG 528896
Query 34624 TGTTTTAACGATAAA-ATTGTGTCTT-CGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681
| || ||| || || || ||| || | || ||||||| || || || || ||||
Sbjct 528897 C-TCTTGACGTTATCGATGGTATCTGACGAT-TCGACTTCCAGAGTAATAGTCTTGCCGG 528954
Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706
| | || || || |||||||||||
Sbjct 528955 TCAGAGTCTTGACGAAAATCTGCAT 528979
Score = 82.4 bits (90), Expect = 5e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | ||||| || || ||| |||||| || ||||| || || ||
Sbjct 529209 CCTCCACGAAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 529268
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || |||| ||||| || || || || || || | |||||| ||||| || ||
Sbjct 529269 AGCGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 529328
Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622
| ||||||||||| ||||||
Sbjct 529329 ATACCCTCCTTGTCCTGGATCTT 529351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314726366448419
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |