Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq812 149 5e-31 seq609 118 9e-22 >seq812 Length=913560 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||||||| |||||||||| ||||| ||| |||| Sbjct 528979 ATGCAGATTTTCGTCAAGACTCTGACCGGCAAGACTATTACTCTGGAAGTCGAATCGTCA 528920 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| || || ||||| ||||||||||| || ||||| || Sbjct 528919 GATACCATCGATAACGTCAAGAGCAAGATCCAAGATAAAGAAGGCATCCCTCCCGACCAG 528860 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || || || |||||||| | ||| | |||||||||||| Sbjct 528859 CAGCGTCTTATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGCACCTTGTCCGATTACAAC 528800 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| || | || | || | || |||| ||||| || Sbjct 528799 ATTCAGAAGGAGTCTACTCTCCACCTTGTCCTCCGCCTGCGTGGTGGTAT 528750 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||| |||| |||||| |||| || | || || ||| | | Sbjct 528751 ATGCAGATTTTTGTTAAGACTTTGACTGGCAAGACTATCACATTGGAGGTTGAATCCAGC 528692 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || ||||||||||| ||||| || || || || || Sbjct 528691 GACACAATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAG 528632 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || || || || |||| ||| || ||| | ||||| |||||| Sbjct 528631 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGTACCTTGTCCGACTACAAC 528572 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||| || ||| | || ||||| |||| | || ||||| Sbjct 528571 ATCCAGAAGGAATCTACCCTGCACCTGGTTCTGCGACTCCGTGGTGG 528525 >seq609 Length=32548 Score = 118 bits (130), Expect = 9e-22 Identities = 130/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 || ||| | ||||| | ||||| ||||| || ||||| || ||||| || || || ||| Sbjct 20850 TCTGACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGAT 20909 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 ||||| ||| | || | |||||| |||||| | |||||| || ||| | |||||| Sbjct 20910 CAACAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTAC 20969 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||| || ||| | || |||||| | ||| | || ||||| || Sbjct 20970 AACATTCAAAAGGAATCTACCCTTCACTTGGTTCTCCGTCTTCGTGGTGGTAT 21022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434913817047360