Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq795 107 2e-18
>seq795
Length=187477
Score = 107 bits (118), Expect = 2e-18
Identities = 275/407 (68%), Gaps = 20/407 (5%)
Strand=Plus/Plus
Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787
|||||||| || || | || |||||||| | |||||| ||||| |||
Sbjct 30904 ACGTAGAACTGTGCGAACATATGACACGGGGGCAATGCCATCTTCTTCAGATCGGCGGGG 30963
Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847
|||||||||| ||| | ||||| | |||| |||||| | ||||| ||| |||||
Sbjct 30964 TTCCACGCGCTCATGATGATCCGGCGATCATAAGGGTTATGTTTCAACTTGTGAATCACA 31023
Query 6848 TACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCG 6905
| |||| ||||| || | |||| || | ||| || | |||||| | ||| || |
Sbjct 31024 T-CTGCTAGCTGATCGACACCCTTGCCGGTATAATCTGTCTTCGCATCTAT-ATATTCGG 31081
Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG 6965
| |||||||| | ||||||||| ||||| || || |||| || || | || ||| |
Sbjct 31082 CACCAAAGTGACGCCACTGGAAGCCGTATACGGGACCCAGATCTCCAACTTCACGATGCG 31141
Query 6966 GGAACCCC-CGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024
|| ||| |||| ||| || || ||||| ||||| | | ||||||||||| | ||
Sbjct 31142 ACAAGCCCACGCT-GTCGAGGAACTCTCGTGACCCATTGCCATCCCAGATCTTGATGCC- 31199
Query 7025 CGGGACGAGAGCTCCTTGGTGTT-----CGTGGCCCCCCTCACGAACCACAGCAGCTCCT 7079
|| | ||| ||| || |||| || |||||||| ||||| ||||
Sbjct 31200 --GGCC--TCACTCAATGGGATTGAAGACGTGCTTCCAGCAACGAACCAGAGCAGTTCCT 31255
Query 7080 CGACCACGCCCTTCCAGT--ACACACGTTTCGTCGTCAGCAGCGGAA 7124
| | ||||| || ||| | ||||||||||| || || |||||||
Sbjct 31256 CAATGACGCC--TCGAGTAAAAACACGTTTCGTTGTGAGGAGCGGAA 31300
Score = 107 bits (118), Expect = 2e-18
Identities = 275/407 (68%), Gaps = 20/407 (5%)
Strand=Plus/Minus
Query 34221 TTCCGCTGCTGACGACGAAACGTGTGT--ACTGGAAGGGCGTGGTCGAGGAGCTGCTGTG 34278
||||||| || || ||||||||||| | ||| || ||||| | ||||| ||||| ||
Sbjct 31300 TTCCGCTCCTCACAACGAAACGTGTTTTTACTCGA--GGCGTCATTGAGGAACTGCTCTG 31243
Query 34279 GTTCGTGAGGGGGGCCACG-----AACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATC 34333
|||||| || |||| || ||| ||| | || || | ||||||
Sbjct 31242 GTTCGTTGCTGGAAGCACGTCTTCAATCCCATTGAGTGA--GGCC---GGCATCAAGATC 31188
Query 34334 TGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCG-GGGGTTCCCATCTCGGGAGGA 34392
||||| | | ||||| ||||| || || ||| |||| ||| || | ||| || |
Sbjct 31187 TGGGATGGCAATGGGTCACGAGAGTTCCTCGAC-AGCGTGGGCTTGTCGCATCGTGAAGT 31129
Query 34393 GGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGG 34452
|| || |||| || || ||||| ||||||||| | |||||||| || || ||| |
Sbjct 31128 TGGAGATCTGGGTCCCGTATACGGCTTCCAGTGGCGTCACTTTGGTGCCGAATAT-ATAG 31070
Query 34453 GAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAGTACGTGATCGACACC 34510
|||||| | || ||| | || |||| | || ||||| |||| | ||||| |||
Sbjct 31069 ATGCGAAGACAGATTATACCGGCAAGGGTGTCGATCAGCTAGCAG-ATGTGATTCACAAG 31011
Query 34511 TTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTC 34570
||||| | |||||| |||| | ||||| | ||| ||||||||||||| |||||
Sbjct 31010 TTGAAACATAACCCTTATGATCGCCGGATCATCATGAGCGCGTGGAACCCCGCCGATCTG 30951
Query 34571 CCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT 34617
|||||| | |||||||| || | || || ||||||||
Sbjct 30950 AAGAAGATGGCATTGCCCCCGTGTCATATGTTCGCACAGTTCTACGT 30904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448257676434960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |