Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq795 107 2e-18 >seq795 Length=187477 Score = 107 bits (118), Expect = 2e-18 Identities = 275/407 (68%), Gaps = 20/407 (5%) Strand=Plus/Plus Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 |||||||| || || | || |||||||| | |||||| ||||| ||| Sbjct 30904 ACGTAGAACTGTGCGAACATATGACACGGGGGCAATGCCATCTTCTTCAGATCGGCGGGG 30963 Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847 |||||||||| ||| | ||||| | |||| |||||| | ||||| ||| ||||| Sbjct 30964 TTCCACGCGCTCATGATGATCCGGCGATCATAAGGGTTATGTTTCAACTTGTGAATCACA 31023 Query 6848 TACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCG 6905 | |||| ||||| || | |||| || | ||| || | |||||| | ||| || | Sbjct 31024 T-CTGCTAGCTGATCGACACCCTTGCCGGTATAATCTGTCTTCGCATCTAT-ATATTCGG 31081 Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG 6965 | |||||||| | ||||||||| ||||| || || |||| || || | || ||| | Sbjct 31082 CACCAAAGTGACGCCACTGGAAGCCGTATACGGGACCCAGATCTCCAACTTCACGATGCG 31141 Query 6966 GGAACCCC-CGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024 || ||| |||| ||| || || ||||| ||||| | | ||||||||||| | || Sbjct 31142 ACAAGCCCACGCT-GTCGAGGAACTCTCGTGACCCATTGCCATCCCAGATCTTGATGCC- 31199 Query 7025 CGGGACGAGAGCTCCTTGGTGTT-----CGTGGCCCCCCTCACGAACCACAGCAGCTCCT 7079 || | ||| ||| || |||| || |||||||| ||||| |||| Sbjct 31200 --GGCC--TCACTCAATGGGATTGAAGACGTGCTTCCAGCAACGAACCAGAGCAGTTCCT 31255 Query 7080 CGACCACGCCCTTCCAGT--ACACACGTTTCGTCGTCAGCAGCGGAA 7124 | | ||||| || ||| | ||||||||||| || || ||||||| Sbjct 31256 CAATGACGCC--TCGAGTAAAAACACGTTTCGTTGTGAGGAGCGGAA 31300 Score = 107 bits (118), Expect = 2e-18 Identities = 275/407 (68%), Gaps = 20/407 (5%) Strand=Plus/Minus Query 34221 TTCCGCTGCTGACGACGAAACGTGTGT--ACTGGAAGGGCGTGGTCGAGGAGCTGCTGTG 34278 ||||||| || || ||||||||||| | ||| || ||||| | ||||| ||||| || Sbjct 31300 TTCCGCTCCTCACAACGAAACGTGTTTTTACTCGA--GGCGTCATTGAGGAACTGCTCTG 31243 Query 34279 GTTCGTGAGGGGGGCCACG-----AACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATC 34333 |||||| || |||| || ||| ||| | || || | |||||| Sbjct 31242 GTTCGTTGCTGGAAGCACGTCTTCAATCCCATTGAGTGA--GGCC---GGCATCAAGATC 31188 Query 34334 TGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCG-GGGGTTCCCATCTCGGGAGGA 34392 ||||| | | ||||| ||||| || || ||| |||| ||| || | ||| || | Sbjct 31187 TGGGATGGCAATGGGTCACGAGAGTTCCTCGAC-AGCGTGGGCTTGTCGCATCGTGAAGT 31129 Query 34393 GGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGG 34452 || || |||| || || ||||| ||||||||| | |||||||| || || ||| | Sbjct 31128 TGGAGATCTGGGTCCCGTATACGGCTTCCAGTGGCGTCACTTTGGTGCCGAATAT-ATAG 31070 Query 34453 GAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAGTACGTGATCGACACC 34510 |||||| | || ||| | || |||| | || ||||| |||| | ||||| ||| Sbjct 31069 ATGCGAAGACAGATTATACCGGCAAGGGTGTCGATCAGCTAGCAG-ATGTGATTCACAAG 31011 Query 34511 TTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTC 34570 ||||| | |||||| |||| | ||||| | ||| ||||||||||||| ||||| Sbjct 31010 TTGAAACATAACCCTTATGATCGCCGGATCATCATGAGCGCGTGGAACCCCGCCGATCTG 30951 Query 34571 CCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT 34617 |||||| | |||||||| || | || || |||||||| Sbjct 30950 AAGAAGATGGCATTGCCCCCGTGTCATATGTTCGCACAGTTCTACGT 30904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448257676434960