Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq812 172 1e-37
seq609 132 1e-25
seq810 120 7e-22
seq578 98.7 2e-15
>seq812
Length=913560
Score = 172 bits (190), Expect = 1e-37
Identities = 173/225 (77%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| || | ||||| |||||||| || ||||| || |||||||| || || | ||
Sbjct 528983 TCCACGGAGGCGCAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAG 529042
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
|| | ||||| || |||||||| || |||||||| || ||||| ||||| ||||| |
Sbjct 529043 TGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGAT 529102
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
|| ||||| ||||||||||| || ||||| ||||||||||| || ||||||||
Sbjct 529103 ACCCTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTC 529162
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| ||||| |||||||| || || ||||| || || | ||||||
Sbjct 529163 GAGGGTGATAGTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 529207
Score = 159 bits (176), Expect = 8e-34
Identities = 157/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| |||||| | || || ||||| || |||||||| || |||||||| || || | ||
Sbjct 529211 TCCACGAAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAG 529270
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
|| | || || || |||||||| || |||||||| || || || ||||||||||| |
Sbjct 529271 CGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGAT 529330
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
|| ||||||||||||||||| || ||||| ||||||||||| ||| || |||||
Sbjct 529331 ACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTC 529390
Query 211070 GAGAGTGATCGTCTTTCCCGTGA 211092
||| ||||| |||||||| ||||
Sbjct 529391 GAGGGTGATGGTCTTTCCAGTGA 529413
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| ||||| ||||| || || ||||| ||||| | | ||| | ||||||
Sbjct 528768 AGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCT 528827
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| |||||| || || |||||||| || || ||||| ||||| | ||||| || ||
Sbjct 528828 TCCAACTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCT 528887
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| |||||||| || || ||| || || ||||| || |||
Sbjct 528888 TGGATCTTGCTCTTGACGTTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGTC 528947
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| || || | ||||||
Sbjct 528948 TTGCCGGTCAGAGTCTTGACGAAAATCTGCAT 528979
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| |||| || || ||||| || || || || || |||||||| || || | | |||
Sbjct 528530 ACGGAGTCGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACAAGGT 528589
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || ||||||||||| || || ||||| ||||| || ||||||||||| | ||
Sbjct 528590 ACGACCGTCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACC 528649
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||| || ||||| |||||||| || || ||||| | ||||||||| |
Sbjct 528650 TTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATTGTGTCGCTGGATTCAACCTCCAA 528709
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || | |||||| ||||| | ||||||
Sbjct 528710 TGTGATAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751
>seq609
Length=32548
Score = 132 bits (146), Expect = 1e-25
Identities = 143/187 (76%), Gaps = 2/187 (1%)
Strand=Plus/Minus
Query 210875 GGGTTAGCTAATATTTCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGAT 210934
||||| | ||||| | |||||| | || || | |||||| || || || ||||| ||
Sbjct 21032 GGGTTCGATAATACCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAAT 20973
Query 210935 GTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTT 210993
||| ||||| | ||||| | | || ||||| || || || || ||||| || || ||||
Sbjct 20972 GTTGTAATCACTCAAGG-TACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTT 20914
Query 210994 GTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGT 211053
|||| |||||||| | |||||||| || ||||||||||| || || || || |||||||
Sbjct 20913 GTTGATCAGGAGGGATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCAATGGTGT 20854
Query 211054 CAGAGCT 211060
|||||||
Sbjct 20853 CAGAGCT 20847
>seq810
Length=1034423
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || || || | |||||||| |||||||| || ||||||||
Sbjct 583009 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATC 582950
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || ||||| || |||| || ||||||||||||||||| || ||||| |||
Sbjct 582949 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 582890
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| || || || ||||| || || ||||| ||||| || ||||| || ||
Sbjct 582889 ATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 582831
>seq578
Length=440600
Score = 98.7 bits (108), Expect = 2e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 178229 TACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATCGAGACCGGGAGCCTCA 178288
||||| | ||| || |||| || || |||||||||||| |||||||||||||||
Sbjct 116019 TACTTGTGGTACAGAGCCTCAAACTCATCGCCATAGACATCAGAAAGACCGGGAGCCTCA 115960
Query 178289 TTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTTCATGAAGAGGTCAGAG 178348
|| |||||||| || |||| | ||||| || || || ||||||||||| || |
Sbjct 115959 TTTGGGCAGAATAGGGTCCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGA 115900
Query 178349 GTCCAGATGGCATAGAA 178365
||||||| |||||||||
Sbjct 115899 GTCCAGAGGGCATAGAA 115883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159139480071695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |