Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq812 172 1e-37 seq609 132 1e-25 seq810 120 7e-22 seq578 98.7 2e-15 >seq812 Length=913560 Score = 172 bits (190), Expect = 1e-37 Identities = 173/225 (77%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | ||||| |||||||| || ||||| || |||||||| || || | || Sbjct 528983 TCCACGGAGGCGCAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAG 529042 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||||| || |||||||| || |||||||| || ||||| ||||| ||||| | Sbjct 529043 TGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGAT 529102 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || ||||| ||||||||||| || ||||| ||||||||||| || |||||||| Sbjct 529103 ACCCTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTC 529162 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| ||||| |||||||| || || ||||| || || | |||||| Sbjct 529163 GAGGGTGATAGTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 529207 Score = 159 bits (176), Expect = 8e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||| | || || ||||| || |||||||| || |||||||| || || | || Sbjct 529211 TCCACGAAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAG 529270 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | || || || |||||||| || |||||||| || || || ||||||||||| | Sbjct 529271 CGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGAT 529330 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || ||||||||||||||||| || ||||| ||||||||||| ||| || ||||| Sbjct 529331 ACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTC 529390 Query 211070 GAGAGTGATCGTCTTTCCCGTGA 211092 ||| ||||| |||||||| |||| Sbjct 529391 GAGGGTGATGGTCTTTCCAGTGA 529413 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| ||||| ||||| || || ||||| ||||| | | ||| | |||||| Sbjct 528768 AGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCT 528827 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||| || || |||||||| || || ||||| ||||| | ||||| || || Sbjct 528828 TCCAACTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCT 528887 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||| || || ||| || || ||||| || ||| Sbjct 528888 TGGATCTTGCTCTTGACGTTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGTC 528947 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| || || | |||||| Sbjct 528948 TTGCCGGTCAGAGTCTTGACGAAAATCTGCAT 528979 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| |||| || || ||||| || || || || || |||||||| || || | | ||| Sbjct 528530 ACGGAGTCGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACAAGGT 528589 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || ||||||||||| || || ||||| ||||| || ||||||||||| | || Sbjct 528590 ACGACCGTCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACC 528649 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||| || ||||| |||||||| || || ||||| | ||||||||| | Sbjct 528650 TTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATTGTGTCGCTGGATTCAACCTCCAA 528709 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || | |||||| ||||| | |||||| Sbjct 528710 TGTGATAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751 >seq609 Length=32548 Score = 132 bits (146), Expect = 1e-25 Identities = 143/187 (76%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 210875 GGGTTAGCTAATATTTCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGAT 210934 ||||| | ||||| | |||||| | || || | |||||| || || || ||||| || Sbjct 21032 GGGTTCGATAATACCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAAT 20973 Query 210935 GTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTT 210993 ||| ||||| | ||||| | | || ||||| || || || || ||||| || || |||| Sbjct 20972 GTTGTAATCACTCAAGG-TACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTT 20914 Query 210994 GTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGT 211053 |||| |||||||| | |||||||| || ||||||||||| || || || || ||||||| Sbjct 20913 GTTGATCAGGAGGGATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCAATGGTGT 20854 Query 211054 CAGAGCT 211060 ||||||| Sbjct 20853 CAGAGCT 20847 >seq810 Length=1034423 Score = 120 bits (132), Expect = 7e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || || || | |||||||| |||||||| || |||||||| Sbjct 583009 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATC 582950 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || ||||| || |||| || ||||||||||||||||| || ||||| ||| Sbjct 582949 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 582890 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| || || || ||||| || || ||||| ||||| || ||||| || || Sbjct 582889 ATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 582831 >seq578 Length=440600 Score = 98.7 bits (108), Expect = 2e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 178229 TACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATCGAGACCGGGAGCCTCA 178288 ||||| | ||| || |||| || || |||||||||||| ||||||||||||||| Sbjct 116019 TACTTGTGGTACAGAGCCTCAAACTCATCGCCATAGACATCAGAAAGACCGGGAGCCTCA 115960 Query 178289 TTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTTCATGAAGAGGTCAGAG 178348 || |||||||| || |||| | ||||| || || || ||||||||||| || | Sbjct 115959 TTTGGGCAGAATAGGGTCCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGA 115900 Query 178349 GTCCAGATGGCATAGAA 178365 ||||||| ||||||||| Sbjct 115899 GTCCAGAGGGCATAGAA 115883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159139480071695