Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq812 86.0 4e-12
seq609 82.4 5e-11
>seq812
Length=913560
Score = 86.0 bits (94), Expect = 4e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| ||||| || | || || || || ||||| | || ||||| ||||
Sbjct 528751 ATGCAGATTTTTGTTAAGACTTTGACTGGCAAGACTATCACATTGGAGGTTGAATCCAGC 528692
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || || ||| ||||| |||||| | || || || ||
Sbjct 528691 GACACAATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAG 528632
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || ||||| || || || ||||| |||| || || || ||| ||||||
Sbjct 528631 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGTACCTTGTCCGACTACAAC 528572
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || || || ||
Sbjct 528571 ATCCAGAAGGAATCTAC 528555
Score = 86.0 bits (94), Expect = 4e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || || || || || || || ||||| ||||| || || |
Sbjct 528979 ATGCAGATTTTCGTCAAGACTCTGACCGGCAAGACTATTACTCTGGAAGTCGAATCGTCA 528920
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | || | | || || || || |||||||| | || || || ||
Sbjct 528919 GATACCATCGATAACGTCAAGAGCAAGATCCAAGATAAAGAAGGCATCCCTCCCGACCAG 528860
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || ||||| || || || ||||||| | ||||| || ||||||||||
Sbjct 528859 CAGCGTCTTATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGCACCTTGTCCGATTACAAC 528800
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||| ||
Sbjct 528799 ATTCAGAAGGAGTCTAC 528783
>seq609
Length=32548
Score = 82.4 bits (90), Expect = 5e-11
Identities = 108/150 (72%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || ||||| || || || |||||| | || || ||||||
Sbjct 20853 GACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCAA 20912
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| ||| | || || ||||| |||||||| ||||||| || || || | |||||||||
Sbjct 20913 CAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAAC 20972
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820
|| ||||| || || || | || || |||
Sbjct 20973 ATTCAAAAGGAATCTACCCTTCACTTGGTT 21002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338006127268244
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |