Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq744 190 2e-43
>seq744
Length=38458
Score = 190 bits (210), Expect = 2e-43
Identities = 550/838 (66%), Gaps = 14/838 (2%)
Strand=Plus/Plus
Query 4259 TTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTC 4318
||| || || || || |||||||| ||||| || || ||||||| | || || | ||
Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603
Query 4319 CATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAA 4378
|||||| ||||| ||||| || || ||||| || ||| | ||||| || | |
Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663
Query 4379 TCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCT 4438
|| ||||| || ||||| || || |||| ||| | | | || || || || |
Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723
Query 4439 CACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATC 4498
|| || || || | |||||||| || ||||| || | || ||||| ||| |||||
Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783
Query 4499 TTTTATTTTATCTTTAGATGGTTTATTTACTAAG-TATCCAAACAATAAACACGCAAAAT 4557
|| | |||| | | | |||| ||| | ||| || | ||| ||||| |
Sbjct 30784 CTTGACGCGTTCTTG-GCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAGT 30842
Query 4558 CACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTA 4617
|| ||| | ||||| || | | |||| ||| || || || || || ||||| |
Sbjct 30843 CAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCA 30902
Query 4618 AACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTA 4677
|||| | || || |||||||| || | ||||| || ||||| ||||| || ||||| |
Sbjct 30903 AACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCGA 30962
Query 4678 CGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTA 4737
| || ||||| || || | || | || || | | || |||||| || |
Sbjct 30963 CAGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCG---TTAGAGGAAATCCACTTGA 31019
Query 4738 ATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTAC 4797
| ||||| | ||| ||| | || | || || || |||| ||||| ||| | |
Sbjct 31020 AGGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCAT-- 31077
Query 4798 TTTTTTCAAATGGGT--CTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATG 4855
|| |||| ||| | ||| ||||||||||| || | || || || |||| | ||
Sbjct 31078 TTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTG 31137
Query 4856 TATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTA-CTTGAACTT 4914
|||||||| || || ||||| || || || ||| ||||||| | | |||| ||||
Sbjct 31138 AATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTG-ACTT 31196
Query 4915 CGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACG 4974
| | |||||| ||| || |||||||| || || || || || | ||||| || |
Sbjct 31197 CATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGG 31256
Query 4975 CCAAAACATGAGATATAAAGTACTGTTCG---TCAGGCTTAAGTTTTTTCCAGTGGGGCA 5031
| || || |||| |||||| | ||||| || | | | |||| ||| | | |
Sbjct 31257 CTAAGACGCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAA 31316
Query 5032 AATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTA 5089
|| || | ||||| | ||||||| | |||||||| || ||||| ||||| || ||
Sbjct 31317 GGTCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATA 31374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427045212465719
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |