Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq744 295 9e-75 seq723 187 3e-42 seq578 154 2e-32 >seq744 Length=38458 Score = 295 bits (326), Expect = 9e-75 Identities = 574/839 (68%), Gaps = 19/839 (2%) Strand=Plus/Plus Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911 |||||| ||| ||||| || || || || || || ||||||| | || || | || Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603 Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAG 47971 |||||| ||||||||||| || | ||||| || | |||||| | | || || Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663 Query 47972 TCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTT 48031 | ||| ||||||||||| || ||| ||||| || ||||||| || || || Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723 Query 48032 AACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTAT--TATC 48089 ||| || ||||| ||||| | ||| || ||||| || ||||||| |||| || |||| Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783 Query 48090 GATGTTACCGTTTCCTCACTTGG-TGGATACAACAAATGTTTAAACATTAAACATGCAAA 48148 || || ||| | || || | ||| | | ||| |||| | | ||| ||||| Sbjct 30784 CTTG--ACGCGTTCTTGGCTAGGACGCTTACGA-AGATGGGTAAATAAAAGACAAGCAAA 30840 Query 48149 ATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCAT 48208 ||| |||||| |||||||| | || || ||||| || ||||| | ||| ||||| Sbjct 30841 GTCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCAT 30900 Query 48209 TAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 48268 | |||||||| ||||||||||| || | || || || ||||| ||||| || ||||| Sbjct 30901 CAAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTC 30960 Query 48269 TACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTT---GTGTATCCACCG 48325 || || ||||| || ||| | ||| | || | |||| | |||||| Sbjct 30961 GACAGCAGCAAAGGCAACAAGACGCTCAGCAAAA---GAACCGTTAGAGGAAATCCAC-- 31015 Query 48326 TTG--TGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 48383 ||| |||||||||||||| | || | |||||| || || || |||||| |||||| Sbjct 31016 TTGAAGGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGC 31075 Query 48384 AAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAG 48443 | | ||| || | | ||||||| | ||||| || || |||||||| || |||| | | Sbjct 31076 ATTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCG 31135 Query 48444 TGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACC 48503 |||||||||||||| || ||||| || || |||||| | ||||| | |||| || Sbjct 31136 TGAATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACT 31195 Query 48504 TCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAAT 48563 || |||||| || | |||| || ||||| || || ||||| | ||||||| || Sbjct 31196 TCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAG 31255 Query 48564 GCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATT---CCAGTCATTG 48620 ||||| || | ||||| | |||||| |||| || || ||| |||| Sbjct 31256 GCTAAGACGCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGA 31315 Query 48621 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATA 48679 | || || | ||| | |||||||||||||||||| || || || ||||| ||||| Sbjct 31316 AGGTCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATA 31374 >seq723 Length=18298 Score = 187 bits (206), Expect = 3e-42 Identities = 470/714 (66%), Gaps = 3/714 (0%) Strand=Plus/Plus Query 76820 ATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTT 76879 ||||||||| ||||| |||| ||| |||| | || || ||||| |||| ||| Sbjct 4430 ATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAATTT 4489 Query 76880 GGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCC 76939 | | | | || ||||| || | |||||| || ||| ||| ||||| |||||||| Sbjct 4490 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAGCTCC 4549 Query 76940 TCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAAC 76999 ||||||||| ||||| | ||||| || |||| | ||| ||||| | |||||| | | Sbjct 4550 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTTTTGTATAG 4609 Query 77000 TTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCTGATATAAT 77056 | ||||| |||||| |||| | | || ||| || ||| |||| | || || Sbjct 4610 CTTTTTGAGATCATCAGGAACGCCGGGAATACGTTGGATACTACCGCCATGAGCAATCAT 4669 Query 77057 TGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGG 77116 | ||||| || | ||||||||| || | ||| | | | | | | ||| | Sbjct 4670 CATGTTCTTGATGTTATCATTCCATAAATCGAGCTCAATGAGGTCATTCAATAAATGCTG 4729 Query 77117 ATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGG 77176 || |||||||| ||||| ||| || | ||| || |||||||| || || || || Sbjct 4730 GTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAGG 4789 Query 77177 TTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCAC 77236 || | |||| || || ||||| |||||| ||| |||||| |||||||| || || Sbjct 4790 CTCGAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAAC 4849 Query 77237 CAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCA 77296 | | | || | || ||||| | | |||| || || | | | |||||||| Sbjct 4850 AAGAAGAGAGTTACGGACACCATATTTCTTGATATTGGCTCTCAAAGTATTCCAATCGAG 4909 Query 77297 AAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGA 77356 | | || || | |||| ||| | ||||| ||| ||||| || | ||| || ||| Sbjct 4910 ATGTTCCGAGCCTTTGACATTCCATAAATCGTGTTGAAGAATACCTTGACTTACAGGTGA 4969 Query 77357 TCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGC 77416 || | || || ||||| ||||| | | || || || ||||| || || || || Sbjct 4970 GCCTTCGTAGGTCTCATAGGGTCCCTGTTCTTTCGCAAGCTCACACGAAGCCTCTAAAGC 5029 Query 77417 TCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAA 77476 | |||||||| |||||||||| | | || | | |||||| | |||||| Sbjct 5030 AGCAAAATAAATTCTTTCGAAAATATCTCTGTTCAATTGAGCAGCTTCAGGAGAATCAAA 5089 Query 77477 CGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAAT 77530 ||||||| | | | ||||| ||||| || | || ||||| || | ||| || Sbjct 5090 CGGATAACGCATCAAGATAAATGCATCAGCAAGCCCTTGAACGCCGAGACCGAT 5143 Score = 134 bits (148), Expect = 2e-26 Identities = 581/904 (64%), Gaps = 16/904 (2%) Strand=Plus/Plus Query 78113 ATGCCATGGTTCTAGATATATTGCCATAACTCCAGGT-CGTTTATTACCTCCCTGATCTA 78171 |||||| ||||||| ||| | || | | | | | | |||||| |||||| || | Sbjct 5942 ATGCCAAGGTTCTATATAGACAGCAA-AGTTACCGTTGCGTTTACCACCTCCTTGTGTCA 6000 Query 78172 TATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCAT 78231 | | | || |||| |||| | ||||| | |||||||||||| || || || || || | Sbjct 6001 CAAAGCGAGCAGTGTCATTAAAGACTCTGAGCATTGGAATAATGCCATTGGAGGTACCGT 6060 Query 78232 TTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTC 78291 ||||||| | |||||| ||| | ||||| || | | | || | || | Sbjct 6061 TTGTTCCTGCGATATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGC 6120 Query 78292 CTGCCATCTTAGATATTAGAGCGCAACGTTTCAAT-GTATCGTAGATACCCTCTATACTG 78350 | || ||| || || |||| || ||| || ||||||||||| || || |||||| Sbjct 6121 CAGCAGACTTGGAGATACGAGCACA-CGTGGTGATAGTATCGTAGATGCCTTCGATACTG 6179 Query 78351 TCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTA 78410 || || |||| | || ||| || || ||||||| |||| | | | || || || || Sbjct 6180 TCCTCTTTCATTTGAACAAGGAAGCAACTAGACAATTGAGGTTTAGGTGTACCAGCGTTG 6239 Query 78411 AATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATA 78470 || ||||| || | ||||| ||||| |||| || | |||| || ||| | Sbjct 6240 AACAATGTAGGTGTAGCATGAGTAAAGTATTTAGATGACATAAGATCATAGGTTCTGAAG 6299 Query 78471 GCTGATTCTATGTCCCATT--GATGAATTCCTACCGCTACACGCATCAACATATGCTGAG 78528 || ||||| || |||| ||||| || | || |||||||| | ||| | |||| Sbjct 6300 GCGCTTTCTAGGT--CATTACCGTGAATGCCAATAGCAACACGCATGATCATGTATTGAG 6357 Query 78529 GTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAAC 78588 ||| |||||| | | ||||| || || |||||||| ||| || |||||||| | Sbjct 6358 GTCGTTCAACGATTTCGTTATTGATCTTTAACAAGTAACTACGTTCTAACGTTTTAAAGC 6417 Query 78589 CAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGT 78648 |||| |||| | ||| ||||| |||| ||| || ||| | | ||||| || Sbjct 6418 CAAAGAAGTTAAAATCAAAATCTCTATCGTGAATTATGGCAGCGTCAATCTTATCGGCGT 6477 Query 78649 ATTTGGTAACAATATCCATGACAGTAGTT-GAAATAATAGGAGATCGTACACCATT--TT 78705 | |||| || ||| | | || |||| || || ||| | | || || Sbjct 6478 TAGCCATGACAACAT-CATAAAGTTCCTTGGAAACAAGAG--GATTGGGTTGCTTTAGTT 6534 Query 78706 TAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCT 78765 | |||| ||| | | | | | || ||| |||||| | | ||||||| Sbjct 6535 TGGGATGTTCATGATGGTACAGTTTATGGATGACAGAACTAAACTTATCATCGGTTTCCT 6594 Query 78766 TGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAG 78825 | || || || |||| ||| || | ||||| || || ||| |||||||||| | || | Sbjct 6595 TTTGAAGGTTTGATATAGCAATGCGAGCAGCAAGGATGGCAAAATCAGGATGGTTCGTTG 6654 Query 78826 TACAAGT-GGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTA 78884 | || || || || | || || | | | |||||| || | || || | || | | Sbjct 6655 T-CATGTACGCAGCCGTCTCGGCGGTGAGATTATCTAGTTCAACCGTAGTAATGCCTTGA 6713 Query 78885 TATAGTCCTTGAATAACTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAAT 78944 || | || | ||| || || ||||| ||||| | ||||| || ||||| Sbjct 6714 TAAACACCAGACACAACCTTTTGAGCAATTTTAGCAGGAACAACAAAGTCTTCGTTCAGA 6773 Query 78945 CCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCAT 79004 || || || | ||| ||||| || || || |||||||| |||||||| || || | | Sbjct 6774 CCGTAGCAAAGCTTTGATATACGCGAGGTTATCTTATCAAACATAACATTTTCTTTTCTT 6833 Query 79005 CCAT 79008 |||| Sbjct 6834 CCAT 6837 >seq578 Length=440600 Score = 154 bits (170), Expect = 2e-32 Identities = 478/734 (65%), Gaps = 8/734 (1%) Strand=Plus/Minus Query 77913 GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGG 77972 ||| | |||| ||||| ||||| || | |||||| | || || ||||||||| Sbjct 116011 GTACAGAGCC--TCAAACTCATCGCCATAGACATCAGAAAGACCGGGAGCCTCATTTGGG 115954 Query 77973 CACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCAT 78032 || | | | ||||||||| | || ||| || ||||| |||||||| || |||| Sbjct 115953 CAGAATAGGGTCCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTCCAG 115894 Query 78033 AGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCG 78092 || ||| || || || || | ||| ||||| || || ||||| ||| || Sbjct 115893 AGGGCATAGAAGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCC 115834 Query 78093 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGT 78152 | ||||| | || || || ||||| || || || || || || | | | ||||| || Sbjct 115833 AAGAACTCAAAGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGC 115774 Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 || || || ||||| || | ||||| || ||||| || | |||| | ||| || | | Sbjct 115773 TTGTTCCCGCCCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATAGGGACA 115714 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 | ||||| || ||||| || || ||| || ||| || | || || ||| Sbjct 115713 AGCCCGTTGGAAGTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGATACGGTGG 115654 Query 78273 ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG 78332 | | | || || || || || |||| || || | || ||| ||||| || || Sbjct 115653 ACGTTGAGACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCA 115594 Query 78333 TAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 78392 ||||||||||| || ||||| ||| |||| | | ||| || ||| | || || | Sbjct 115593 TAGATACCCTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGCTGCGGC 115534 Query 78393 TGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGT 78452 ||| ||| || || || || | ||||| || || || || || |||| | || | Sbjct 115533 TGAGGAGTACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTCTGGGACATC 115474 Query 78453 AGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACG 78511 |||||||| || || ||| | || | ||| || | || ||||| ||||| ||||| Sbjct 115473 AGATTGTAGGTCTCGATAACCTTCTCGAGGTCATCACCG-TGGATTCCGACCGCAACACG 115415 Query 78512 CATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTT 78571 ||| | ||| |||||||| | ||| | ||| ||| || | || || ||| Sbjct 115414 CATAATCATGTGCTGAGGACGCTCAGCAACCTTTCCATTGATGCGGAGCAGATACGATCG 115355 Query 78572 TTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTCTCGTAAATAATAACA 78629 ||||| ||| || || || || || | ||| ||||| || | || |||| |||| | Sbjct 115354 TTCCAGAGTCTTGAATCCGAAGTATTGGTAGTTGAAA--TCACGGTCATAAACAATAGCG 115297 Query 78630 GAATTTAGTTTATC 78643 || || | || ||| Sbjct 115296 GAGTTCAATTCATC 115283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694661479927520