Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq744 295 9e-75
seq723 187 3e-42
seq578 154 2e-32
>seq744
Length=38458
Score = 295 bits (326), Expect = 9e-75
Identities = 574/839 (68%), Gaps = 19/839 (2%)
Strand=Plus/Plus
Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911
|||||| ||| ||||| || || || || || || ||||||| | || || | ||
Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603
Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAG 47971
|||||| ||||||||||| || | ||||| || | |||||| | | || ||
Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663
Query 47972 TCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTT 48031
| ||| ||||||||||| || ||| ||||| || ||||||| || || ||
Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723
Query 48032 AACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTAT--TATC 48089
||| || ||||| ||||| | ||| || ||||| || ||||||| |||| || ||||
Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783
Query 48090 GATGTTACCGTTTCCTCACTTGG-TGGATACAACAAATGTTTAAACATTAAACATGCAAA 48148
|| || ||| | || || | ||| | | ||| |||| | | ||| |||||
Sbjct 30784 CTTG--ACGCGTTCTTGGCTAGGACGCTTACGA-AGATGGGTAAATAAAAGACAAGCAAA 30840
Query 48149 ATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCAT 48208
||| |||||| |||||||| | || || ||||| || ||||| | ||| |||||
Sbjct 30841 GTCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCAT 30900
Query 48209 TAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 48268
| |||||||| ||||||||||| || | || || || ||||| ||||| || |||||
Sbjct 30901 CAAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTC 30960
Query 48269 TACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTT---GTGTATCCACCG 48325
|| || ||||| || ||| | ||| | || | |||| | ||||||
Sbjct 30961 GACAGCAGCAAAGGCAACAAGACGCTCAGCAAAA---GAACCGTTAGAGGAAATCCAC-- 31015
Query 48326 TTG--TGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 48383
||| |||||||||||||| | || | |||||| || || || |||||| ||||||
Sbjct 31016 TTGAAGGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGC 31075
Query 48384 AAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAG 48443
| | ||| || | | ||||||| | ||||| || || |||||||| || |||| | |
Sbjct 31076 ATTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCG 31135
Query 48444 TGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACC 48503
|||||||||||||| || ||||| || || |||||| | ||||| | |||| ||
Sbjct 31136 TGAATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACT 31195
Query 48504 TCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAAT 48563
|| |||||| || | |||| || ||||| || || ||||| | ||||||| ||
Sbjct 31196 TCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAG 31255
Query 48564 GCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATT---CCAGTCATTG 48620
||||| || | ||||| | |||||| |||| || || ||| ||||
Sbjct 31256 GCTAAGACGCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGA 31315
Query 48621 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATA 48679
| || || | ||| | |||||||||||||||||| || || || ||||| |||||
Sbjct 31316 AGGTCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATA 31374
>seq723
Length=18298
Score = 187 bits (206), Expect = 3e-42
Identities = 470/714 (66%), Gaps = 3/714 (0%)
Strand=Plus/Plus
Query 76820 ATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTT 76879
||||||||| ||||| |||| ||| |||| | || || ||||| |||| |||
Sbjct 4430 ATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAATTT 4489
Query 76880 GGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCC 76939
| | | | || ||||| || | |||||| || ||| ||| ||||| ||||||||
Sbjct 4490 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAGCTCC 4549
Query 76940 TCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAAC 76999
||||||||| ||||| | ||||| || |||| | ||| ||||| | |||||| | |
Sbjct 4550 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTTTTGTATAG 4609
Query 77000 TTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCTGATATAAT 77056
| ||||| |||||| |||| | | || ||| || ||| |||| | || ||
Sbjct 4610 CTTTTTGAGATCATCAGGAACGCCGGGAATACGTTGGATACTACCGCCATGAGCAATCAT 4669
Query 77057 TGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGG 77116
| ||||| || | ||||||||| || | ||| | | | | | | ||| |
Sbjct 4670 CATGTTCTTGATGTTATCATTCCATAAATCGAGCTCAATGAGGTCATTCAATAAATGCTG 4729
Query 77117 ATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGG 77176
|| |||||||| ||||| ||| || | ||| || |||||||| || || || ||
Sbjct 4730 GTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAGG 4789
Query 77177 TTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCAC 77236
|| | |||| || || ||||| |||||| ||| |||||| |||||||| || ||
Sbjct 4790 CTCGAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAAC 4849
Query 77237 CAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCA 77296
| | | || | || ||||| | | |||| || || | | | ||||||||
Sbjct 4850 AAGAAGAGAGTTACGGACACCATATTTCTTGATATTGGCTCTCAAAGTATTCCAATCGAG 4909
Query 77297 AAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGA 77356
| | || || | |||| ||| | ||||| ||| ||||| || | ||| || |||
Sbjct 4910 ATGTTCCGAGCCTTTGACATTCCATAAATCGTGTTGAAGAATACCTTGACTTACAGGTGA 4969
Query 77357 TCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGC 77416
|| | || || ||||| ||||| | | || || || ||||| || || || ||
Sbjct 4970 GCCTTCGTAGGTCTCATAGGGTCCCTGTTCTTTCGCAAGCTCACACGAAGCCTCTAAAGC 5029
Query 77417 TCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAA 77476
| |||||||| |||||||||| | | || | | |||||| | ||||||
Sbjct 5030 AGCAAAATAAATTCTTTCGAAAATATCTCTGTTCAATTGAGCAGCTTCAGGAGAATCAAA 5089
Query 77477 CGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAAT 77530
||||||| | | | ||||| ||||| || | || ||||| || | ||| ||
Sbjct 5090 CGGATAACGCATCAAGATAAATGCATCAGCAAGCCCTTGAACGCCGAGACCGAT 5143
Score = 134 bits (148), Expect = 2e-26
Identities = 581/904 (64%), Gaps = 16/904 (2%)
Strand=Plus/Plus
Query 78113 ATGCCATGGTTCTAGATATATTGCCATAACTCCAGGT-CGTTTATTACCTCCCTGATCTA 78171
|||||| ||||||| ||| | || | | | | | | |||||| |||||| || |
Sbjct 5942 ATGCCAAGGTTCTATATAGACAGCAA-AGTTACCGTTGCGTTTACCACCTCCTTGTGTCA 6000
Query 78172 TATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCAT 78231
| | | || |||| |||| | ||||| | |||||||||||| || || || || || |
Sbjct 6001 CAAAGCGAGCAGTGTCATTAAAGACTCTGAGCATTGGAATAATGCCATTGGAGGTACCGT 6060
Query 78232 TTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTC 78291
||||||| | |||||| ||| | ||||| || | | | || | || |
Sbjct 6061 TTGTTCCTGCGATATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGC 6120
Query 78292 CTGCCATCTTAGATATTAGAGCGCAACGTTTCAAT-GTATCGTAGATACCCTCTATACTG 78350
| || ||| || || |||| || ||| || ||||||||||| || || ||||||
Sbjct 6121 CAGCAGACTTGGAGATACGAGCACA-CGTGGTGATAGTATCGTAGATGCCTTCGATACTG 6179
Query 78351 TCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTA 78410
|| || |||| | || ||| || || ||||||| |||| | | | || || || ||
Sbjct 6180 TCCTCTTTCATTTGAACAAGGAAGCAACTAGACAATTGAGGTTTAGGTGTACCAGCGTTG 6239
Query 78411 AATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATA 78470
|| ||||| || | ||||| ||||| |||| || | |||| || ||| |
Sbjct 6240 AACAATGTAGGTGTAGCATGAGTAAAGTATTTAGATGACATAAGATCATAGGTTCTGAAG 6299
Query 78471 GCTGATTCTATGTCCCATT--GATGAATTCCTACCGCTACACGCATCAACATATGCTGAG 78528
|| ||||| || |||| ||||| || | || |||||||| | ||| | ||||
Sbjct 6300 GCGCTTTCTAGGT--CATTACCGTGAATGCCAATAGCAACACGCATGATCATGTATTGAG 6357
Query 78529 GTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAAC 78588
||| |||||| | | ||||| || || |||||||| ||| || |||||||| |
Sbjct 6358 GTCGTTCAACGATTTCGTTATTGATCTTTAACAAGTAACTACGTTCTAACGTTTTAAAGC 6417
Query 78589 CAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGT 78648
|||| |||| | ||| ||||| |||| ||| || ||| | | ||||| ||
Sbjct 6418 CAAAGAAGTTAAAATCAAAATCTCTATCGTGAATTATGGCAGCGTCAATCTTATCGGCGT 6477
Query 78649 ATTTGGTAACAATATCCATGACAGTAGTT-GAAATAATAGGAGATCGTACACCATT--TT 78705
| |||| || ||| | | || |||| || || ||| | | || ||
Sbjct 6478 TAGCCATGACAACAT-CATAAAGTTCCTTGGAAACAAGAG--GATTGGGTTGCTTTAGTT 6534
Query 78706 TAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCT 78765
| |||| ||| | | | | | || ||| |||||| | | |||||||
Sbjct 6535 TGGGATGTTCATGATGGTACAGTTTATGGATGACAGAACTAAACTTATCATCGGTTTCCT 6594
Query 78766 TGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAG 78825
| || || || |||| ||| || | ||||| || || ||| |||||||||| | || |
Sbjct 6595 TTTGAAGGTTTGATATAGCAATGCGAGCAGCAAGGATGGCAAAATCAGGATGGTTCGTTG 6654
Query 78826 TACAAGT-GGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTA 78884
| || || || || | || || | | | |||||| || | || || | || | |
Sbjct 6655 T-CATGTACGCAGCCGTCTCGGCGGTGAGATTATCTAGTTCAACCGTAGTAATGCCTTGA 6713
Query 78885 TATAGTCCTTGAATAACTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAAT 78944
|| | || | ||| || || ||||| ||||| | ||||| || |||||
Sbjct 6714 TAAACACCAGACACAACCTTTTGAGCAATTTTAGCAGGAACAACAAAGTCTTCGTTCAGA 6773
Query 78945 CCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCAT 79004
|| || || | ||| ||||| || || || |||||||| |||||||| || || | |
Sbjct 6774 CCGTAGCAAAGCTTTGATATACGCGAGGTTATCTTATCAAACATAACATTTTCTTTTCTT 6833
Query 79005 CCAT 79008
||||
Sbjct 6834 CCAT 6837
>seq578
Length=440600
Score = 154 bits (170), Expect = 2e-32
Identities = 478/734 (65%), Gaps = 8/734 (1%)
Strand=Plus/Minus
Query 77913 GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGG 77972
||| | |||| ||||| ||||| || | |||||| | || || |||||||||
Sbjct 116011 GTACAGAGCC--TCAAACTCATCGCCATAGACATCAGAAAGACCGGGAGCCTCATTTGGG 115954
Query 77973 CACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCAT 78032
|| | | | ||||||||| | || ||| || ||||| |||||||| || ||||
Sbjct 115953 CAGAATAGGGTCCAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTCCAG 115894
Query 78033 AGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCG 78092
|| ||| || || || || | ||| ||||| || || ||||| ||| ||
Sbjct 115893 AGGGCATAGAAGAGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCC 115834
Query 78093 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGT 78152
| ||||| | || || || ||||| || || || || || || | | | ||||| ||
Sbjct 115833 AAGAACTCAAAGATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGC 115774
Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212
|| || || ||||| || | ||||| || ||||| || | |||| | ||| || | |
Sbjct 115773 TTGTTCCCGCCCTGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATAGGGACA 115714
Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272
| ||||| || ||||| || || ||| || ||| || | || || |||
Sbjct 115713 AGCCCGTTGGAAGTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGATACGGTGG 115654
Query 78273 ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG 78332
| | | || || || || || |||| || || | || ||| ||||| || ||
Sbjct 115653 ACGTTGAGACCAATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCA 115594
Query 78333 TAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 78392
||||||||||| || ||||| ||| |||| | | ||| || ||| | || || |
Sbjct 115593 TAGATACCCTCAATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGCTGCGGC 115534
Query 78393 TGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGT 78452
||| ||| || || || || | ||||| || || || || || |||| | || |
Sbjct 115533 TGAGGAGTACCGGCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTCTGGGACATC 115474
Query 78453 AGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACG 78511
|||||||| || || ||| | || | ||| || | || ||||| ||||| |||||
Sbjct 115473 AGATTGTAGGTCTCGATAACCTTCTCGAGGTCATCACCG-TGGATTCCGACCGCAACACG 115415
Query 78512 CATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTT 78571
||| | ||| |||||||| | ||| | ||| ||| || | || || |||
Sbjct 115414 CATAATCATGTGCTGAGGACGCTCAGCAACCTTTCCATTGATGCGGAGCAGATACGATCG 115355
Query 78572 TTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTCTCGTAAATAATAACA 78629
||||| ||| || || || || || | ||| ||||| || | || |||| |||| |
Sbjct 115354 TTCCAGAGTCTTGAATCCGAAGTATTGGTAGTTGAAA--TCACGGTCATAAACAATAGCG 115297
Query 78630 GAATTTAGTTTATC 78643
|| || | || |||
Sbjct 115296 GAGTTCAATTCATC 115283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694661479927520
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