Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq744 297 3e-75 seq723 183 4e-41 seq578 163 4e-35 >seq744 Length=38458 Score = 297 bits (328), Expect = 3e-75 Identities = 572/838 (68%), Gaps = 17/838 (2%) Strand=Plus/Plus Query 46341 TTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 46400 ||| || ||| ||||| || || || || || || ||||||| | || || | || Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603 Query 46401 CATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAG 46460 |||||| ||||| ||||| ||| | | ||||| || | |||||| | | || || Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663 Query 46461 TCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 46520 | ||| ||||||||||| || || ||||| || ||||||| || ||||| Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723 Query 46521 GACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATAT--TATC 46578 || || ||||| ||||| | ||| || |||||||| ||||||| ||| | || |||| Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783 Query 46579 GATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAA 46638 || || ||| | || || | | | ||| |||| | | ||| ||||| Sbjct 30784 CTTG--ACGCGTTCTTGGCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAG 30841 Query 46639 TCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATT 46698 ||| ||||||||||||||| | || || ||||| || ||||| | |||||||| Sbjct 30842 TCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATC 30901 Query 46699 AGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCT 46758 | ||||| || ||||||||||| || | || || || ||||| ||||| || ||||| Sbjct 30902 AAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCG 30961 Query 46759 ACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG---AATCCACCTT 46815 ||||| || || || ||||| | ||| | || | | | ||| ||||||| | Sbjct 30962 ACAGCAGCAAAGGCAACAAGACGCTCAGCAAAA---GAACCGTTAGAGGAAATCCAC--T 31016 Query 46816 TGA--GCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAA 46873 ||| ||||||||||||||| | || | |||||| || || || |||||| |||||| | Sbjct 31017 TGAAGGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCA 31076 Query 46874 AGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAAT 46933 | ||| || | ||||||| | ||| || || || |||||||| || |||||| | Sbjct 31077 TTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGT 31136 Query 46934 GAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCT 46993 |||| |||||||| || ||||| || || |||||| | ||||||| ||||| || | Sbjct 31137 GAATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTT 31196 Query 46994 CTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATG 47053 | |||||| || | ||| || ||||| || || ||||| | ||||||| || | Sbjct 31197 CATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGG 31256 Query 47054 CCAATACATGTTTAATAAAATA---TTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGA 47110 | || || | ||||| | || | ||||| || || | ||| |||| | Sbjct 31257 CTAAGACGCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAA 31316 Query 47111 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATA 47168 || || | ||| | ||||||||||||||| || || || || ||||| ||||| Sbjct 31317 GGTCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATA 31374 >seq723 Length=18298 Score = 183 bits (202), Expect = 4e-41 Identities = 475/717 (66%), Gaps = 9/717 (1%) Strand=Plus/Plus Query 75415 ATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTT 75474 ||||||||| ||||| |||| ||| |||| | || || ||||| || | ||| Sbjct 4430 ATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAATTT 4489 Query 75475 GGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCC 75534 | | | | || ||||| || | |||||| || ||| ||| ||||| |||||||| Sbjct 4490 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAGCTCC 4549 Query 75535 TCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAAC 75594 ||||||||| ||||| | ||||| || |||| | ||| ||||| | |||||| | | Sbjct 4550 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTTTTGTATAG 4609 Query 75595 TTGTTTGATATCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAAT 75651 | ||||| |||||| |||| | || ||| || ||||||| || || || Sbjct 4610 CTTTTTGAGATCATCAGGAACGCCGGGAATACGTTGGATACTACCGCCATGAGCAATCAT 4669 Query 75652 TGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGG 75711 | |||||||| | ||||||||| || | ||| | | | | | | ||| | Sbjct 4670 CATGTTCTTGATGTTATCATTCCATAAATCGAGCTCAATGAGGTCATTCAATAAATGCTG 4729 Query 75712 ATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGG 75771 || || ||||| ||||| ||| || | || || |||||||| || || || || Sbjct 4730 GTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAGG 4789 Query 75772 TTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCAC 75831 || | |||| || || ||||| |||||| ||| |||||| |||||||| || || Sbjct 4790 CTCGAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAAC 4849 Query 75832 CAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCA 75891 | | | || | || ||||| | | |||| || || | | | |||||||| Sbjct 4850 AAGAAGAGAGTTACGGACACCATATTTCTTGATATTGGCTCTCAAAGTATTCCAATCGAG 4909 Query 75892 AAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGA 75951 | | || || | |||| ||| | ||||| ||| ||||| || | || || ||| Sbjct 4910 ATGTTCCGAGCCTTTGACATTCCATAAATCGTGTTGAAGAATACCTTGACTTACAGGTGA 4969 Query 75952 TCCATTATATGTTTCGTA-AGTCCC-GTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAAC 76009 || | || || || || ||||| || |||| || || || || |||||||| Sbjct 4970 GCCTTCGTAGGTCTCATAGGGTCCCTGTTCTTT--CGCAAGCTCACACGAAGCCTCTAAA 5027 Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGC-GCTTCAAGACTATC 76068 ||| | |||||||| |||||||||| | | || | || || |||||| || ||| Sbjct 5028 GCAGCAAAATAAATTCTTTCGAAAATATCTCTGTTCA-ATTGAGCAGCTTCAGGAGAATC 5086 Query 76069 AAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAAT 76125 ||| |||||| | | | ||||||||||| || || || ||||| || | ||| || Sbjct 5087 AAACGGATAACGCATCAAGATAAATGCATCAGCAAGCCCTTGAACGCCGAGACCGAT 5143 Score = 165 bits (182), Expect = 1e-35 Identities = 350/516 (68%), Gaps = 6/516 (1%) Strand=Plus/Plus Query 76708 ATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTAT 76767 |||||| ||||||| ||| | || | ||| |||||| |||||| || | Sbjct 5942 ATGCCAAGGTTCTATATAGACAGCAAAGTTACCGTTGCGTTTACCACCTCCTTGTGTCAC 6001 Query 76768 ATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATT 76827 | | | ||||||| |||| | ||||| | ||||||||||||||| || || ||||| || Sbjct 6002 AAAGCGAGCAGTGTCATTAAAGACTCTGAGCATTGGAATAATGCCATTGGAGGTACCGTT 6061 Query 76828 TGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCC 76887 |||||| | |||||| ||| | ||||||| || | || | ||| | || || Sbjct 6062 TGTTCCTGCGATATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCC 6121 Query 76888 TGCCATTTTAGAGATTAGAGCACAGCGT-TTCAATGTGTCATAGATGCCCTCTATACTAT 76946 || || ||||| ||||||| ||| | | || || |||||||| || ||||| | Sbjct 6122 AGCAGACTTGGAGATACGAGCACA-CGTGGTGATAGTATCGTAGATGCCTTCGATACTGT 6180 Query 76947 CATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAA 77006 | || |||| | || ||| || || ||||||| |||| | | | || || || || | Sbjct 6181 CCTCTTTCATTTGAACAAGGAAGCAACTAGACAATTGAGGTTTAGGTGTACCAGCGTTGA 6240 Query 77007 ACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAA 77066 |||||||||| | |||||||| || |||| || | |||| || | ||| | Sbjct 6241 ACAATGTAGGTGTAGCATGAGTAAAGTATTTAGATGACATAAGATCATA-GGTTCTGAAG 6299 Query 77067 CTGCTTCTATATCCCATT--GATGAATTCCTACAGCGACACGCATCAACATATGCTGAGG 77124 |||| | || |||| ||||| || | ||| |||||||| | ||| | ||||| Sbjct 6300 GCGCTT-TCTAGGTCATTACCGTGAATGCCAATAGCAACACGCATGATCATGTATTGAGG 6358 Query 77125 TCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACC 77184 |||||| || | | ||||| || || |||||||| ||| || |||||||| || Sbjct 6359 TCGTTCAACGATTTCGTTATTGATCTTTAACAAGTAACTACGTTCTAACGTTTTAAAGCC 6418 Query 77185 AAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||| |||| | ||| ||||| |||| ||| || Sbjct 6419 AAAGAAGTTAAAATCAAAATCTCTATCGTGAATTAT 6454 >seq578 Length=440600 Score = 163 bits (180), Expect = 4e-35 Identities = 467/714 (65%), Gaps = 8/714 (1%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| ||||| || | |||||| | ||| ||| ||||| || || | | | | Sbjct 116001 TCAAACTCATCGCCATAGACATCAGAAAGACCGGGAGCCTCATTTGGGCAGAATAGGGTC 115942 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || ||||| | || ||| || ||||| |||||||| || |||| || ||| || Sbjct 115941 CAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGCATAGAAG 115882 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 || || || | ||| ||||| || || ||||| ||| || | |||||| | Sbjct 115881 AGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAG 115822 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 || || || ||||| || || || || || || | | |||| || || || || || ||| Sbjct 115821 ATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGCCC 115762 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | ||||| |||||||| || | |||| | ||| || | || ||||| || Sbjct 115761 TGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGGAA 115702 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 || || || || ||| || ||| || ||||| ||| | || || Sbjct 115701 GTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGATACGGTGGACGTTGAGACCA 115642 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || | || ||||| | ||||| ||||| ||||||||||| ||||| Sbjct 115641 ATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACCCTCA 115582 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 || || || ||| |||| | | ||| || ||| | || || | ||| ||| || Sbjct 115581 ATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGTACCG 115522 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 || || |||| || || || || |||||||| |||| | || | |||||||| || Sbjct 115521 GCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTAGGTC 115462 Query 77060 TCAATAACTGCTTCTATATCCCAT--TGATGAATTCCTACAGCGACACGCATCAACATAT 77117 || ||||| ||||| | ||| || ||||| || || |||||||| | ||| | Sbjct 115461 TCGATAAC--CTTCTCGAGGTCATCACCGTGGATTCCGACCGCAACACGCATAATCATGT 115404 Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177 ||||||| || || || ||| ||| || | || || ||| ||||| ||| | Sbjct 115403 GCTGAGGACGCTCAGCAACCTTTCCATTGATGCGGAGCAGATACGATCGTTCCAGAGTCT 115344 Query 77178 TAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACCGAATT 77229 | || || || || | ||| ||||| || | || |||| |||| | || || Sbjct 115343 TGAATCCGAAGTATTGGTAGTTGAAA--TCACGGTCATAAACAATAGCGGAGTT 115292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712926887453760