Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq744 297 3e-75
seq723 183 4e-41
seq578 163 4e-35
>seq744
Length=38458
Score = 297 bits (328), Expect = 3e-75
Identities = 572/838 (68%), Gaps = 17/838 (2%)
Strand=Plus/Plus
Query 46341 TTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 46400
||| || ||| ||||| || || || || || || ||||||| | || || | ||
Sbjct 30544 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 30603
Query 46401 CATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAG 46460
|||||| ||||| ||||| ||| | | ||||| || | |||||| | | || ||
Sbjct 30604 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCAAATCCAAGAGCAACCATGAG 30663
Query 46461 TCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 46520
| ||| ||||||||||| || || ||||| || ||||||| || |||||
Sbjct 30664 ACGATCAGCAACGAATTCGATGTATTGGCACATCAAAGCAGAATTCATGCCGATGAGAGC 30723
Query 46521 GACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATAT--TATC 46578
|| || ||||| ||||| | ||| || |||||||| ||||||| ||| | || ||||
Sbjct 30724 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 30783
Query 46579 GATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAA 46638
|| || ||| | || || | | | ||| |||| | | ||| |||||
Sbjct 30784 CTTG--ACGCGTTCTTGGCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAG 30841
Query 46639 TCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATT 46698
||| ||||||||||||||| | || || ||||| || ||||| | ||||||||
Sbjct 30842 TCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATC 30901
Query 46699 AGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCT 46758
| ||||| || ||||||||||| || | || || || ||||| ||||| || |||||
Sbjct 30902 AAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAAATACCTTCG 30961
Query 46759 ACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG---AATCCACCTT 46815
||||| || || || ||||| | ||| | || | | | ||| ||||||| |
Sbjct 30962 ACAGCAGCAAAGGCAACAAGACGCTCAGCAAAA---GAACCGTTAGAGGAAATCCAC--T 31016
Query 46816 TGA--GCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAA 46873
||| ||||||||||||||| | || | |||||| || || || |||||| |||||| |
Sbjct 31017 TGAAGGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCA 31076
Query 46874 AGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAAT 46933
| ||| || | ||||||| | ||| || || || |||||||| || |||||| |
Sbjct 31077 TTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGT 31136
Query 46934 GAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCT 46993
|||| |||||||| || ||||| || || |||||| | ||||||| ||||| || |
Sbjct 31137 GAATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTT 31196
Query 46994 CTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATG 47053
| |||||| || | ||| || ||||| || || ||||| | ||||||| || |
Sbjct 31197 CATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGG 31256
Query 47054 CCAATACATGTTTAATAAAATA---TTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGA 47110
| || || | ||||| | || | ||||| || || | ||| |||| |
Sbjct 31257 CTAAGACGCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAA 31316
Query 47111 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATA 47168
|| || | ||| | ||||||||||||||| || || || || ||||| |||||
Sbjct 31317 GGTCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATA 31374
>seq723
Length=18298
Score = 183 bits (202), Expect = 4e-41
Identities = 475/717 (66%), Gaps = 9/717 (1%)
Strand=Plus/Plus
Query 75415 ATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTT 75474
||||||||| ||||| |||| ||| |||| | || || ||||| || | |||
Sbjct 4430 ATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAATTT 4489
Query 75475 GGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCC 75534
| | | | || ||||| || | |||||| || ||| ||| ||||| ||||||||
Sbjct 4490 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAGCTCC 4549
Query 75535 TCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAAC 75594
||||||||| ||||| | ||||| || |||| | ||| ||||| | |||||| | |
Sbjct 4550 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTTTTGTATAG 4609
Query 75595 TTGTTTGATATCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAAT 75651
| ||||| |||||| |||| | || ||| || ||||||| || || ||
Sbjct 4610 CTTTTTGAGATCATCAGGAACGCCGGGAATACGTTGGATACTACCGCCATGAGCAATCAT 4669
Query 75652 TGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGG 75711
| |||||||| | ||||||||| || | ||| | | | | | | ||| |
Sbjct 4670 CATGTTCTTGATGTTATCATTCCATAAATCGAGCTCAATGAGGTCATTCAATAAATGCTG 4729
Query 75712 ATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGG 75771
|| || ||||| ||||| ||| || | || || |||||||| || || || ||
Sbjct 4730 GTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAGG 4789
Query 75772 TTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCAC 75831
|| | |||| || || ||||| |||||| ||| |||||| |||||||| || ||
Sbjct 4790 CTCGAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAAC 4849
Query 75832 CAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCA 75891
| | | || | || ||||| | | |||| || || | | | ||||||||
Sbjct 4850 AAGAAGAGAGTTACGGACACCATATTTCTTGATATTGGCTCTCAAAGTATTCCAATCGAG 4909
Query 75892 AAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGA 75951
| | || || | |||| ||| | ||||| ||| ||||| || | || || |||
Sbjct 4910 ATGTTCCGAGCCTTTGACATTCCATAAATCGTGTTGAAGAATACCTTGACTTACAGGTGA 4969
Query 75952 TCCATTATATGTTTCGTA-AGTCCC-GTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAAC 76009
|| | || || || || ||||| || |||| || || || || ||||||||
Sbjct 4970 GCCTTCGTAGGTCTCATAGGGTCCCTGTTCTTT--CGCAAGCTCACACGAAGCCTCTAAA 5027
Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGC-GCTTCAAGACTATC 76068
||| | |||||||| |||||||||| | | || | || || |||||| || |||
Sbjct 5028 GCAGCAAAATAAATTCTTTCGAAAATATCTCTGTTCA-ATTGAGCAGCTTCAGGAGAATC 5086
Query 76069 AAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAAT 76125
||| |||||| | | | ||||||||||| || || || ||||| || | ||| ||
Sbjct 5087 AAACGGATAACGCATCAAGATAAATGCATCAGCAAGCCCTTGAACGCCGAGACCGAT 5143
Score = 165 bits (182), Expect = 1e-35
Identities = 350/516 (68%), Gaps = 6/516 (1%)
Strand=Plus/Plus
Query 76708 ATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTAT 76767
|||||| ||||||| ||| | || | ||| |||||| |||||| || |
Sbjct 5942 ATGCCAAGGTTCTATATAGACAGCAAAGTTACCGTTGCGTTTACCACCTCCTTGTGTCAC 6001
Query 76768 ATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATT 76827
| | | ||||||| |||| | ||||| | ||||||||||||||| || || ||||| ||
Sbjct 6002 AAAGCGAGCAGTGTCATTAAAGACTCTGAGCATTGGAATAATGCCATTGGAGGTACCGTT 6061
Query 76828 TGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCC 76887
|||||| | |||||| ||| | ||||||| || | || | ||| | || ||
Sbjct 6062 TGTTCCTGCGATATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCC 6121
Query 76888 TGCCATTTTAGAGATTAGAGCACAGCGT-TTCAATGTGTCATAGATGCCCTCTATACTAT 76946
|| || ||||| ||||||| ||| | | || || |||||||| || ||||| |
Sbjct 6122 AGCAGACTTGGAGATACGAGCACA-CGTGGTGATAGTATCGTAGATGCCTTCGATACTGT 6180
Query 76947 CATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAA 77006
| || |||| | || ||| || || ||||||| |||| | | | || || || || |
Sbjct 6181 CCTCTTTCATTTGAACAAGGAAGCAACTAGACAATTGAGGTTTAGGTGTACCAGCGTTGA 6240
Query 77007 ACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAA 77066
|||||||||| | |||||||| || |||| || | |||| || | ||| |
Sbjct 6241 ACAATGTAGGTGTAGCATGAGTAAAGTATTTAGATGACATAAGATCATA-GGTTCTGAAG 6299
Query 77067 CTGCTTCTATATCCCATT--GATGAATTCCTACAGCGACACGCATCAACATATGCTGAGG 77124
|||| | || |||| ||||| || | ||| |||||||| | ||| | |||||
Sbjct 6300 GCGCTT-TCTAGGTCATTACCGTGAATGCCAATAGCAACACGCATGATCATGTATTGAGG 6358
Query 77125 TCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACC 77184
|||||| || | | ||||| || || |||||||| ||| || |||||||| ||
Sbjct 6359 TCGTTCAACGATTTCGTTATTGATCTTTAACAAGTAACTACGTTCTAACGTTTTAAAGCC 6418
Query 77185 AAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220
||| |||| | ||| ||||| |||| ||| ||
Sbjct 6419 AAAGAAGTTAAAATCAAAATCTCTATCGTGAATTAT 6454
>seq578
Length=440600
Score = 163 bits (180), Expect = 4e-35
Identities = 467/714 (65%), Gaps = 8/714 (1%)
Strand=Plus/Minus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
||||| ||||| || | |||||| | ||| ||| ||||| || || | | | |
Sbjct 116001 TCAAACTCATCGCCATAGACATCAGAAAGACCGGGAGCCTCATTTGGGCAGAATAGGGTC 115942
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
|| ||||| | || ||| || ||||| |||||||| || |||| || ||| ||
Sbjct 115941 CAGTCACCGTTAGACTCAACACGCTTCATGAAGAGATCGGGAGTCCAGAGGGCATAGAAG 115882
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699
|| || || | ||| ||||| || || ||||| ||| || | |||||| |
Sbjct 115881 AGGTCACGTGCTCTGACCTCTTCCTTACCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAG 115822
Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759
|| || || ||||| || || || || || || | | |||| || || || || || |||
Sbjct 115821 ATGTCGGAGTGCCAGGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTCCCGCCC 115762
Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819
|| || | ||||| |||||||| || | |||| | ||| || | || ||||| ||
Sbjct 115761 TGGTCAACGTATCTTGCAGTGTTGTTGAACACTCGAAGCATAGGGACAAGCCCGTTGGAA 115702
Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879
|| || || || ||| || ||| || ||||| ||| | || ||
Sbjct 115701 GTTCCGTTAGTACCACCGATGTAAGAACCTGTAGCACGGATACGGTGGACGTTGAGACCA 115642
Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939
|| || || || | || ||||| | ||||| ||||| ||||||||||| |||||
Sbjct 115641 ATACCACCCGCAGTCTTGGAGATCATGGCACAAGTCTTCAAGGTGTCATAGATACCCTCA 115582
Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999
|| || || ||| |||| | | ||| || ||| | || || | ||| ||| ||
Sbjct 115581 ATGCTGTCCTCCTTCATATCGATAAGGAAGCAGGAGGCCAGCTGCGGCTGAGGAGTACCG 115522
Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059
|| || |||| || || || || |||||||| |||| | || | |||||||| ||
Sbjct 115521 GCGTTGAACAGAGTCGGCGAGGCGTGAGTGAAGTATTTCTGGGACATCAGATTGTAGGTC 115462
Query 77060 TCAATAACTGCTTCTATATCCCAT--TGATGAATTCCTACAGCGACACGCATCAACATAT 77117
|| ||||| ||||| | ||| || ||||| || || |||||||| | ||| |
Sbjct 115461 TCGATAAC--CTTCTCGAGGTCATCACCGTGGATTCCGACCGCAACACGCATAATCATGT 115404
Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177
||||||| || || || ||| ||| || | || || ||| ||||| ||| |
Sbjct 115403 GCTGAGGACGCTCAGCAACCTTTCCATTGATGCGGAGCAGATACGATCGTTCCAGAGTCT 115344
Query 77178 TAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACCGAATT 77229
| || || || || | ||| ||||| || | || |||| |||| | || ||
Sbjct 115343 TGAATCCGAAGTATTGGTAGTTGAAA--TCACGGTCATAAACAATAGCGGAGTT 115292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712926887453760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |