Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq812 141 2e-28 seq810 89.7 1e-12 seq609 86.0 1e-11 >seq812 Length=913560 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| || ||||||||||| || || ||||||||||||| || || | ||||| Sbjct 528767 GAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATC 528826 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| | || || || |||||||| | ||||||||| | | ||| ||||| || || Sbjct 528827 TTCCAACTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATC 528886 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || ||||| | || | | | ||||| || ||||| ||||||||||| Sbjct 528887 TTGGATCTTGCTCTTGACGTTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGT 528946 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || |||||||| ||||| | |||||| Sbjct 528947 CTTGCCGGTCAGAGTCTTGACGAAAATCTGCAT 528979 Score = 114 bits (126), Expect = 3e-20 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || ||||| || ||||| || ||||||||||| |||| | || | ||||| Sbjct 528996 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCC 529055 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || |||||||| || | |||||||| | | ||| || ||||| | Sbjct 529056 TCAAGCTGCTTT--CCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGATACCCTCCTTAT 529113 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || || || ||||| | || | | |||| ||| ||| || || || || |||| Sbjct 529114 CCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATAG 529173 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || ||||||||||||| |||||| Sbjct 529174 TCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 529207 >seq810 Length=1034423 Score = 89.7 bits (98), Expect = 1e-12 Identities = 130/182 (71%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGA 151974 || ||||||||||| ||| | ||| | |||||||| || ||||| |||||||||| Sbjct 583009 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTT--CCGGCGAAGA 582952 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | || | ||||||||||| | || || ||||| || || || || ||||| | | Sbjct 582951 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 582892 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | |||| || ||| || || || ||||| || || ||||| || ||||| |||| Sbjct 582891 CGATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 582832 Query 152095 AG 152096 || Sbjct 582831 AG 582830 >seq609 Length=32548 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/154 (73%), Gaps = 1/154 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| ||||| || ||||| ||||||||||| || || | || ||||| | Sbjct 20999 CAAG-TGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCGA 20941 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| |||||||| || || | || || || | | ||| |||||||| ||||| | Sbjct 20940 GTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGGA 20881 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT 152050 | ||||| |||||| | || | | |||| || || Sbjct 20880 TCTTTTGCTTGACATTGTCAATGGTGTCAGAGCT 20847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153808337653653