Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017 -02-15] 843 sequences; 47,573,060 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq812 143 2e-29 seq810 98.7 7e-16 seq799 86.0 5e-12 >seq812 Length=913560 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| ||||||||||| |||| |||| ||| | || || Sbjct 528999 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCCTCA 529058 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||||| ||| ||||| || | ||| | ||| ||||| ||| Sbjct 529059 AGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGATACCCTCCTTATCCTGG 529118 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||||| || || ||||| | || || |||||| Sbjct 529119 ATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATAGTCTTT 529178 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||||||||||||||| ||||| Sbjct 529179 CCAGTAAGGGTCTTCACGAAGATCTGCAT 529207 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168 |||| || | |||| || |||||||| || || ||||| ||||||||||| |||| Sbjct 528523 TTCCACCACGGAGTCGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGG 528582 Query 44169 -CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | || | || |||| ||||||||||| || |||||||||| |||||||| || | | Sbjct 528583 ACAAGGT-ACGACCGTCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGA 528641 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCC 44287 || | ||||||||| || ||||| ||||| | | || |||||| |||||| Sbjct 528642 GGGATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATTGTGTCGCTGGATTCA 528701 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| || || ||||| || || | ||||| || || || ||||| Sbjct 528702 ACCTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751 Score = 114 bits (126), Expect = 9e-21 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| || ||| |||||| ||||||||||| || | ||| ||| |||| || Sbjct 529226 CACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCGTCCTC 529285 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || ||||| | ||||||||| || | ||| | ||| ||||| ||| Sbjct 529286 AAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTG 529345 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | |||||||| | ||| || ||||| | || || ||||| Sbjct 529346 GATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTT 529405 Query 44308 TCCCGTGA 44315 ||| |||| Sbjct 529406 TCCAGTGA 529413 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 || ||||| || || |||||| || ||||||||||||| | || | ||| | || || Sbjct 528771 ACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGT-GCGGCCATCTTC 528829 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| || |||||||| | ||||||||| || | ||| | ||||| || || Sbjct 528830 CAACTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTG 528889 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | ||||| || | ||||| || |||| ||||| ||||| Sbjct 528890 GATCTTGCTCTTGACGTTATCGATGGTATCTGACGATTCGACTTCCAGAGTAATAGTCTT 528949 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| ||||| || ||||| Sbjct 528950 GCCGGTCAGAGTCTTGACGAAAATCTGCAT 528979 >seq810 Length=1034423 Score = 98.7 bits (108), Expect = 7e-16 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| ||| || ||| | || || |||||||| ||||| |||| Sbjct 583011 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGA 582952 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 ||| ||||||||| || | || | || ||||| ||| ||||| ||| | | Sbjct 582951 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 582892 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | || ||||||| || || || || | ||||| ||||| ||||| |||||||| |||| Sbjct 582891 CGATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 582832 Query 44328 AG 44329 || Sbjct 582831 AG 582830 >seq799 Length=343686 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| |||||||| || |||||| ||||||||||| || | ||| ||| |||| || Sbjct 28782 CACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGACCGTCCTC 28841 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 |||||||| || || ||||||| ||||||||| || | || | ||| ||||| || Sbjct 28842 GAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTC 28898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359986701436131