Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20cladosporioides_20[genbank_20GCA_5F001931875.2_202017
-02-15] 843 sequences; 47,573,060 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq810 127 2e-24
seq812 116 3e-21
seq799 105 6e-18
>seq810
Length=1034423
Score = 127 bits (140), Expect = 2e-24
Identities = 139/182 (76%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||| || ||||| | || ||||||||||| |||||||| |
Sbjct 583011 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGA 582952
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
|||| ||||| ||||||| ||||| || |||||||||| || | || || | ||| |
Sbjct 582951 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTG 582893
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | |||||| |||||| || || | || || || ||||||||||| ||||| |||
Sbjct 582892 TCGATCGTGTCGGACGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 582833
Query 41852 AA 41853
||
Sbjct 582832 AA 582831
>seq812
Length=913560
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| ||||| || |||||||| ||||| ||||||||
Sbjct 528525 CCACCACGGAGTCGCAGAACCAGGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAC 528584
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| ||| || |||| || |||||||| || || || ||||||||||| ||||| | ||
Sbjct 528585 AAGGTACGACCGTCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGG 528644
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||| || || |||| ||| | | | |||||||| || || ||
Sbjct 528645 ATACCTTCCTTGTCTTGAATCTTGCTCTTC-ACGTTGTCAATTGTGTCGCTGGATTCAAC 528703
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || || || || || |||| ||||| || |||||||||||
Sbjct 528704 CTCCAATGTGATAGTCTTGCCAGTCAAAGTCTTAACAAAAATCTGCAT 528751
Score = 107 bits (118), Expect = 2e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730
||||||||| ||||| ||||||||||| ||||| | || || |||||||| || |||||
Sbjct 529016 CTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAA 529075
Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790
||||| || || ||||| | || | | |||||| ||| ||| || ||| |||
Sbjct 529076 GATCAGACGTTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGATCTTGCTCTT-GACGT 529134
Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849
| | | |||||| ||||| ||||| | || || || || || || || ||||| |
Sbjct 529135 TGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATAGTCTTTCCAGTAAGGGTCTTCA 529194
Query 41850 CGAAAATCTGCAT 41862
|||| ||||||||
Sbjct 529195 CGAAGATCTGCAT 529207
>seq799
Length=343686
Score = 105 bits (116), Expect = 6e-18
Identities = 106/138 (77%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || || || | ||| || || || || ||||||||| ||||| |||||
Sbjct 28761 ACCACCACCACGCAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTC 28820
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
||||| ||||| |||| ||||||||||| || ||||| ||||| ||||| ||||| |
Sbjct 28821 CGAGAGAGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGG 28880
Query 41752 GGGAACGCTCTCCTTGTC 41769
||| | | |||||||||
Sbjct 28881 GGGGATACCCTCCTTGTC 28898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462299128471600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |