Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq737 159 7e-34 seq720 145 2e-29 >seq737 Length=90910 Score = 159 bits (176), Expect = 7e-34 Identities = 303/441 (69%), Gaps = 4/441 (1%) Strand=Plus/Plus Query 230202 TGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGG 230261 |||||| ||||| | || ||||| ||| | ||||||| ||| || ||| || Sbjct 88805 TGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGTTGAAGAAGCGTGG 88864 Query 230262 TGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCA 230321 | | ||| ||||||| | || |||||| ||||| ||| |||||||| | || || Sbjct 88865 TCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGCATGCA-CA 88923 Query 230322 AC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAGACG-GTC 230379 | | |||| | || | | || ||||| || |||||| | | | || | ||| Sbjct 88924 CCGACTTCGCCTGCCTGCTCTTCTCCCAGCTCAAGCACAAGCCCGC-TCCCAGCCTTGTC 88982 Query 230380 AAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCA 230439 | ||||| || ||||| || | | ||| |||||||| | |||||| |||| Sbjct 88983 GAGAGCATCATCACCGAAGCCGTCAAGATCGAGCAGGAGTTCCTGACTGACGCCCTTCCC 89042 Query 230440 TGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGAC 230499 || ||| | ||||||||||| || ||| | ||||||||||| ||||| |||||| Sbjct 89043 TGCGCCCTGCTCGGCATGAACGCCACCCTCATGTGCCAGTACATCGAGTTCGTCGCCGAC 89102 Query 230500 CGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTT 230559 ||| | | || || || || || || | |||||| | | |||||||| | || Sbjct 89103 CGCCTGCTCGTCGCCCTCGGCAACACCAAGTTCTACAACGCCACCAACCCCTTCGACTTC 89162 Query 230560 ATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTAT 230619 |||||| ||| || || ||| ||||||||||||||||| ||||||||| ||||||| Sbjct 89163 ATGGAGAACATCTCCCTCGGAGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 89222 Query 230620 CAGAGGCCTGGTGTGATGAAG 230640 |||| | | ||||| ||| || Sbjct 89223 CAGAAGGCCGGTGTCATGGAG 89243 >seq720 Length=35757 Score = 145 bits (160), Expect = 2e-29 Identities = 300/441 (68%), Gaps = 4/441 (1%) Strand=Plus/Minus Query 230202 TGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGG 230261 |||||| ||||| | || ||||| ||| | ||||||| ||| || ||| || Sbjct 30887 TGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGTTGAAGAAGCGTGG 30828 Query 230262 TGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCA 230321 | | ||| | ||||| | || |||||| ||||| || |||||||| | || || Sbjct 30827 TCTCATGGCCGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCA-CA 30769 Query 230322 AC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAGACG-GTC 230379 | | |||| || | | || ||||| || |||||| | | | || | ||| Sbjct 30768 CCGACTTCGCTTGCCTGCTCTTCTCCCAGCTCAAGCACAAGCCCGC-TCCCAGCCTTGTC 30710 Query 230380 AAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCA 230439 | ||||| || || || || | | ||| |||||||| | |||||| |||| Sbjct 30709 GAGAGCATCATCACCGAGGCCGTCAAGATCGAGCAGGAGTTCCTGACTGACGCCCTTCCC 30650 Query 230440 TGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGAC 230499 ||| || | ||||||||||| || ||| | ||||||||||| ||||| |||||| Sbjct 30649 TGTGCGCTGCTCGGCATGAACGCCACCCTCATGTGCCAGTACATCGAGTTCGTCGCCGAC 30590 Query 230500 CGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTT 230559 ||| | | || || ||||| || || | |||||| | | |||||||| | || Sbjct 30589 CGCCTGCTCGTCGCCCTTGGCAACACCAAGTTCTACAACGCCACCAACCCCTTCGACTTC 30530 Query 230560 ATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTAT 230619 |||||| ||| || || ||| ||||||||||||||||| ||||||||| ||||||| Sbjct 30529 ATGGAGAACATCTCCCTCGGAGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 30470 Query 230620 CAGAGGCCTGGTGTGATGAAG 230640 |||| | | ||||| ||| || Sbjct 30469 CAGAAGGCCGGTGTCATGGAG 30449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057811002318170