Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq720 116 4e-21 >seq720 Length=35757 Score = 116 bits (128), Expect = 4e-21 Identities = 460/719 (64%), Gaps = 6/719 (1%) Strand=Plus/Plus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| || | || || || ||||| ||||| || ||||| | || || || |||||| Sbjct 30468 TGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCTCCGAGGGAGATGTTCTCC 30527 Query 16736 ATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAAT 16795 ||||| || || || || || || | | || | || || || || ||| | Sbjct 30528 ATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTGGTGTTGCCAAGGGCGACGAGCAGG 30587 Query 16796 CTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGT 16855 | || || || || || || || |||||||| | | |||||| || | || || Sbjct 30588 CGGTCGGCGACGAACTCGATGTACTGGCACATGAGGGTGGCGTTCATGCCGAGCAG-CGC 30646 Query 16856 ACCGG-AAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACT 16914 || || ||| || || |||| || ||||| || || || || | || || || Sbjct 30647 ACAGGGAAGGGCGTCAGTCAGGAACTCCTGCTCGATCTTGACGGCCTCGGTGATGATGCT 30706 Query 16915 AGCAACTCGTTCCTCGGACGGTGTATGT--TTAAGATGTTTAAACATCAGACATGCGAAA 16972 | || | || ||| | | ||| || || || || | ||| || ||||| Sbjct 30707 CTCGACAAGG--CTGGGAGCGGGCTTGTGCTTGAGCTGGGAGAAGAGCAGGCAAGCGAAG 30764 Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032 ||| || | |||||||| | | ||| || ||||| || || |||| |||| ||| Sbjct 30765 TCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGCCATG 30824 Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092 || || ||||| ||||| || || | |||||| || || || ||||| |||||||| Sbjct 30825 AGACCACGCTTCTTCAACCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCA 30884 Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTC 17152 || | ||||| ||||| | || || | || | | | | | |||||| | Sbjct 30885 ACAGCGGCAAAGGCGATCAGACGGCAAGCAAAGGTGGACTTCTCATCGCTGATCCATCGC 30944 Query 17153 TGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTC 17212 | |||| || || || | ||||| || | || ||||| || || | | | Sbjct 30945 AGAGCCCAGTCAGCCTTCTTACGGATGCAGGGAATGTTGTCGATGGCGTTGAAGAGGTAC 31004 Query 17213 TCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGT 17272 | | | | |||| | || || || |||||||| ||| ||| | |||||||| Sbjct 31005 TGGCGCTGGCGGACGTCGCTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGG 31064 Query 17273 ATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 ||||||||||| ||||| || ||||| ||||| || ||||| | || || || || Sbjct 31065 ATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCTTCGGGGATCTGGACCTCA 31124 Query 17333 ACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 | ||| || || | || || ||||| || |||||||| |||||||| || || Sbjct 31125 GAGCTGAAGCGCTCGACAAGGTTCTCGTTGACAATGCCGTCAGAAGCGGCGAAGAAGGC 31183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517539395922120