Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq720 361 6e-95 seq737 349 4e-91 seq886 167 2e-36 seq207 154 2e-32 seq959 132 5e-26 seq360 132 5e-26 seq900 113 5e-20 >seq720 Length=35757 Score = 361 bits (400), Expect = 6e-95 Identities = 576/807 (71%), Gaps = 21/807 (3%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| |||||| | |||||| Sbjct 31312 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCAGAGGAGATCGACCTG 31253 Query 116696 TCCAAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | |||| | | |||| | |||||| ||||| Sbjct 31252 TCCAAGGACCTTCACGACTGGAACAAGCGCCTCACCGACGATGAGCGCTTCTTCATTTCC 31193 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || ||||| |||||||| |||||||| ||||||||||| || |||||||| Sbjct 31192 CACGTTCTCGCCTTCTTCGCCGCTTCTGACGGCATTGTCAACGAGAACCTTGTCGAGCGC 31133 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| |||| | |||| ||| | |||| || || ||||||||||| || |||||| || Sbjct 31132 TTCAGCTCTG-AGGTCCAGATCCCCGAAGCTCGTTGCTTCTACGGTTTCCAGATCATGAT 31074 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCTCTTCG 116929 ||||||| | ||||| || | || || |||||||||||| ||| | ||| | || Sbjct 31073 GGAGAACATCCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAGCGACGTCCG 31014 Query 116930 -GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 || || || | || ||||||||||| | || || ||| || ||||||| Sbjct 31013 CCAGCGCCAGTACC---TCTTCAACGCCATCGACAACATTCCCTGCATCCGTAAGAAGGC 30957 Query 116989 CGAGTGGGCGCTGCGCTGGATC-GCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGG 117047 || ||||| ||||| |||||| || ||| || || |||| | || ||| | | Sbjct 30956 TGACTGGGCTCTGCGATGGATCAGCGATGAGA-AGTCCACCTTTGCTTGCCGTCTGATCG 30898 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 |||| || || || ||||| ||||||| || ||| |||||| |||| || ||| | | Sbjct 30897 CCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGTTGA 30838 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||| || || |||||| |||||||||| ||| |||||||||||||||| | ||||||| Sbjct 30837 AGAAGCGTGGTCTCATGGCCGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAGG 30778 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCA-GCGACCGAGCGCG 117226 | |||| |||||| || || |||| ||| || | ||| | ||| | | Sbjct 30777 GCATGCACACCGACTTCGCTTGCCTGCTCTTCTCCCAGCTCAAGCACAAGCCCGCTCCCA 30718 Query 117227 GCGCGCGTCAGGGAG-ATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGA 117285 || | ||| | ||| ||| ||||||| || ||| ||||||||| ||||| || || Sbjct 30717 GC-CTTGTC-GAGAGCATCATCACCGAGGCCGTCAAGATCGAGCAGGAGTTCCTGACTGA 30660 Query 117286 AGCGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAG 117343 || | | || ||||| ||||| || | || || | | |||| || ||||||||| Sbjct 30659 CGCCCTTCCCTGTGCG-CTGCTCGGCATGAA-CGCCACCCTCATGTGCCAGTACATCGAG 30602 Query 117344 TTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAAC 117403 |||||||||||| | ||||| ||| || | | | ||||| ||||||| | ||||| Sbjct 30601 TTCGTCGCCGACCGCCTGCTCGTCGCCCTTGGCAACACCAAGTTCTACAACGCCACCAAC 30542 Query 117404 CCGCTGGACTTTATGAACCTCATCTCC 117430 || | ||||| ||| | ||||||| Sbjct 30541 CCCTTCGACTTCATGGAGAACATCTCC 30515 >seq737 Length=90910 Score = 349 bits (386), Expect = 4e-91 Identities = 575/810 (71%), Gaps = 27/810 (3%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| |||||| | || ||| Sbjct 88380 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCAGAGGAGATCGATCTG 88439 Query 116696 TCCAAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | |||| | | |||| | |||||| ||||| Sbjct 88440 TCCAAGGACCTTCACGACTGGAACAAGCGCCTCACCGACGATGAGCGCTTCTTCATTTCC 88499 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || ||||| || || ||| |||||||| ||||||||||| || |||||||| Sbjct 88500 CACGTTCTCGCCTTCTTTGCTGCCTCTGACGGCATTGTCAACGAGAACCTCGTCGAGCGC 88559 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| |||| ||||| ||| | ||||||| || ||||||||||| || |||||| || Sbjct 88560 TTCAGCTC-TGAGGTTCAGATCCCCGAGGCTCGCTGCTTCTACGGTTTCCAGATCATGAT 88618 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCG--CTCTT 116927 ||||||| | ||||| || | || || |||||||||||| ||| | ||| || Sbjct 88619 GGAGAACATCCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATTAGCGACGTCCG 88678 Query 116928 CGGAGG--AGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAA 116985 | | | || | ||| || ||||||||||| | || || ||| || |||| Sbjct 88679 CCAACGCCAGTACCTC------TTCAACGCCATCGACAACATCCCCTGCATCCGTAAGAA 88732 Query 116986 GGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCG-CCTTCGGCGAGCGCCTGG 117044 ||| || ||||| ||||| |||||| | | |||| | || |||| | || ||| Sbjct 88733 GGCTGACTGGGCTCTGCGGTGGATCAGC-GATGAGAAGTCGACCTTTGCTTGCCGTCTGA 88791 Query 117045 TGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGC 117104 | |||||||| || || ||||| ||||||| || ||| |||||| |||| || ||| Sbjct 88792 TCGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGT 88851 Query 117105 TCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACG 117164 | ||||| || || |||||| | |||||||| ||| ||||||||||||||| | |||| Sbjct 88852 TGAAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCTCGTGACG 88911 Query 117165 AGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCA-GCGACCGAGC 117223 |||| |||| |||||| ||||| |||| ||| || | ||| | ||| | Sbjct 88912 AGGGCATGCACACCGACTTCGCCTGCCTGCTCTTCTCCCAGCTCAAGCACAAGCCCGCTC 88971 Query 117224 GCGGCGCGCGTCAGGGAG-ATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCAC 117282 | || | ||| | ||| ||| ||||||| || ||| ||||||||| ||||| || Sbjct 88972 CCAGC-CTTGTC-GAGAGCATCATCACCGAAGCCGTCAAGATCGAGCAGGAGTTCCTGAC 89029 Query 117283 CGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATC 117340 || || || || |||| ||||| || | || || | | |||| || |||||| Sbjct 89030 TGACGCCCTTCC-CTGCGCCCTGCTCGGCATGAA-CGCCACCCTCATGTGCCAGTACATC 89087 Query 117341 GAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCC 117400 ||||||||||||||| | ||||| ||| || | | | ||||| ||||||| | || Sbjct 89088 GAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACACCAAGTTCTACAACGCCACC 89147 Query 117401 AACCCGCTGGACTTTATGAACCTCATCTCC 117430 ||||| | ||||| ||| | ||||||| Sbjct 89148 AACCCCTTCGACTTCATGGAGAACATCTCC 89177 >seq886 Length=122240 Score = 167 bits (184), Expect = 2e-36 Identities = 176/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| |||||||||||||| |||| || ||| || | Sbjct 45657 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACACTCGAAGTTGAATCCTCA 45716 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| ||||| ||||| ||||| | ||||| Sbjct 45717 GACACCATCGACAACG-TCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCACCTGACCA 45775 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||||| || |||| ||||| ||| |||||||| Sbjct 45776 GCAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCGGACTACAA 45835 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| |||| ||||| | ||| |||| || | |||||| Sbjct 45836 CATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGTGGCGGC 45884 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||| |||||||| | || ||||| | || Sbjct 45429 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCTTCC 45488 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || || | ||||| ||||||||||| | ||||| Sbjct 45489 GACACTATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCA 45547 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| || || ||||| || |||| ||||| || ||||||||| Sbjct 45548 GCAGCGCTTGATCTTCGCTGGTAAGCAGCTTGAAGACGGTCGCACTCTGTCCGACTACAA 45607 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||| || | || || || || || Sbjct 45608 CATTCAGAAAGAATCGACTCTCCACCTGGT 45637 Score = 98.7 bits (108), Expect = 1e-15 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771 |||| || || || |||||| | || || || || |||||| | | | | | ||| Sbjct 45223 TCACCGGTAAGACTATCACCCTTGAGGTGGAGTCCTCCGACACCATCGACAATGTGAAGA 45282 Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831 || || | ||||| |||||||| || | |||||||| || || |||| ||| |||| Sbjct 45283 GCAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAGCGTCTTATCTTCGCCGGCA 45342 Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891 | || || || |||| || |||||| ||| |||||||||||||||||| ||| || | Sbjct 45343 AGCAACTCGAGGACGGCCGTACCCTCTCCGATTACAACATCCAGAAGGAGAGCACCCTTC 45402 Query 40892 ATCTAGT 40898 | || || Sbjct 45403 ACCTCGT 45409 >seq207 Length=38899 Score = 154 bits (170), Expect = 2e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| ||||| ||||| |||||||| |||| || ||| | | Sbjct 301 ATGCAAATCTTCGTCAAAACTCTCACCGGCAAGACCATCACACTCGAAGTTGAATCGTCA 360 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| ||||| ||||| ||||| | ||||| Sbjct 361 GACACCATCGACAACG-TCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCA 419 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||||| || |||| ||||| || |||||||| Sbjct 420 GCAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGTCGGACTACAA 479 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| | || ||||| | ||| |||| || | |||||| Sbjct 480 CATCCAGAAGGAGTCGACTCTGCACTTGGTGCTGCGTCTGCGTGGCGGC 528 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||| |||||||| | || ||||| | || Sbjct 73 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCTTCC 132 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || || | ||||| ||||||||||| | ||||| Sbjct 133 GACACTATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCA 191 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| || || ||||| || || | ||||| || ||||||||| Sbjct 192 GCAGCGTTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACTCTTTCCGACTACAA 251 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| || |||||| | || || || || || Sbjct 252 CATTCAAAAGGAGTCTACTCTTCACCTGGT 281 >seq959 Length=197118 Score = 132 bits (146), Expect = 5e-26 Identities = 138/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| |||| ||||| || | |||| | | Sbjct 40895 TTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGACACCATC 40954 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | | ||| || || | ||||| |||||||| ||| | |||||||| || || Sbjct 40955 GACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGTCTG 41014 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| ||||| || |||| ||||||||| ||||||||||||||||||| Sbjct 41015 ATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAG 41074 Query 40879 G 40879 | Sbjct 41075 G 41075 >seq360 Length=83424 Score = 132 bits (146), Expect = 5e-26 Identities = 138/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| |||| ||||| || | |||| | | Sbjct 40 TTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGACACCATC 99 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | | ||| || || | ||||| |||||||| ||| | |||||||| || || Sbjct 100 GACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGTCTG 159 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| ||||| || |||| ||||||||| ||||||||||||||||||| Sbjct 160 ATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAG 219 Query 40879 G 40879 | Sbjct 220 G 220 >seq900 Length=35157 Score = 113 bits (124), Expect = 5e-20 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||| ||| | |||||||| || || |||| ||| ||||| ||||| || Sbjct 26383 GACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 26442 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||| ||||||||| |||||||||||||||||||||| ||| || || || ||| Sbjct 26443 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGAGCACCCTCCACCTCGTG 26499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515213023809840