Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq886 136 5e-27
seq207 136 5e-27
seq959 86.0 7e-12
seq360 86.0 7e-12
>seq886
Length=122240
Score = 136 bits (150), Expect = 5e-27
Identities = 164/218 (75%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| |||||| |||| ||| |||||| || || ||||| || | || || || |
Sbjct 45872 ACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACC 45813
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
||| || ||||||||||||||||| ||||| ||||||||||| | || | | ||||||
Sbjct 45812 GTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGGGATACCCTCCTT 45753
Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 43145
|| | ||| | || | |||| ||| | | | ||||| ||||| || |||| |||
Sbjct 45752 GT-CTTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCTGAGGATTCAACTTCGAGTGTG 45695
Query 43146 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||||||||| || || ||||| || |||||||||||
Sbjct 45694 ATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 45657
Score = 123 bits (136), Expect = 3e-23
Identities = 144/192 (75%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|| || ||||| ||||| || | |||||| || |||| || |||||||||||||||||
Sbjct 45619 TCTTTCTGAATGTTGTAGTCGGACAGAGTGCGACCGTCTTCAAGCTGCTTACCAGCGAAG 45560
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| | ||||||||||| | ||| | || |||||||||| ||| || |||| |||
Sbjct 45559 ATCAAGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTT 45501
Query 43113 GCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | | |||||| || || || || | |||||||| ||||| || || ||||| ||
Sbjct 45500 GTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 45441
Query 43172 AAAGATTTGCAT 43183
|||||||||||
Sbjct 45440 GAAGATTTGCAT 45429
Score = 82.4 bits (90), Expect = 9e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046
||||||||||| || || |||||||| | || || || |||| || || ||||| ||
Sbjct 45397 GTGCTCTCCTTCTGGATGTTGTAATCGGAGAGGGTACGGCCGTCCTCGAGTTGCTTGCCG 45338
Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099
||||| || || ||||||||||| | || | || |||||||||| ||| ||
Sbjct 45337 GCGAAGATAAGACGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTT 45285
>seq207
Length=38899
Score = 136 bits (150), Expect = 5e-27
Identities = 164/218 (75%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| |||||| |||| || |||||| || || ||||| || | ||| || || |
Sbjct 516 ACGCAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGACC 457
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
||| || ||||||||||||||||| ||||| ||||||||||| | ||| | | ||||||
Sbjct 456 GTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTT 397
Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 43145
|| | ||| | || | |||| ||| | | | ||||| |||||| || |||| |||
Sbjct 396 GT-CTTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCTGACGATTCAACTTCGAGTGTG 339
Query 43146 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||| ||||| || || || || || |||||||||||
Sbjct 338 ATGGTCTTGCCGGTGAGAGTTTTGACGAAGATTTGCAT 301
Score = 125 bits (138), Expect = 8e-24
Identities = 145/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||||||||| ||||| || | ||||| || | || || |||||||||||||||||
Sbjct 264 CTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAA 205
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| | ||||||||||| | ||| | || |||||||||| ||| || |||| |||
Sbjct 204 GATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 146
Query 43112 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | |||||| || || || || | |||||||| ||||| || || ||||| |
Sbjct 145 TGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGA 86
Query 43171 CAAAGATTTGCAT 43183
| |||||||||||
Sbjct 85 CGAAGATTTGCAT 73
>seq959
Length=197118
Score = 86.0 bits (94), Expect = 7e-12
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| || || ||||| || | || || || |||| || |||||||| || ||||| |
Sbjct 41075 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 41016
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||||||||| | || | || |||||||||| ||| || || | |
Sbjct 41015 TCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGT 40956
Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173
| | ||||| || || || |||| |||||||| |||||||| || ||||| || |
Sbjct 40955 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGA 40896
Query 43174 AG 43175
||
Sbjct 40895 AG 40894
>seq360
Length=83424
Score = 86.0 bits (94), Expect = 7e-12
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| || || ||||| || | || || || |||| || |||||||| || ||||| |
Sbjct 220 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 161
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||||||||| | || | || |||||||||| ||| || || | |
Sbjct 160 TCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGT 101
Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173
| | ||||| || || || |||| |||||||| |||||||| || ||||| || |
Sbjct 100 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGA 41
Query 43174 AG 43175
||
Sbjct 40 AG 39
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571810745336520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |