Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq959 132 1e-25 seq528 107 4e-18 >seq959 Length=197118 Score = 132 bits (146), Expect = 1e-25 Identities = 121/153 (79%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 254201 CTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCA 254260 ||| ||||| | |||| | || |||||||||||||||||| ||||||| |||||||| Sbjct 135839 CTGCCCGCCGTACAAGATTGTCGTCCTGGACGAGGCGGACAGCATGACGCAGGACGCGCA 135780 Query 254261 GTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTG 254320 | ||| |||||| | |||||||||||| |||| | ||||| || ||||||||||| Sbjct 135779 GAGCGCGCTCCGCAGGACGATGGAGACGTACTCGAAGATCACGCGCTTCTGCCTGGTGTG 135720 Query 254321 CAACTACGTGTCGAAGATCATCGCCCCGCTGGC 254353 |||||||| || ||||||| ||||||||| Sbjct 135719 TAACTACGTCACGCGCATCATCGACCCGCTGGC 135687 >seq528 Length=15300 Score = 107 bits (118), Expect = 4e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 254201 CTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCA 254260 ||||||||| | |||| | || | || || |||||||| | ||||||| || ||||| Sbjct 10729 CTGTCCGCCGTACAAGATTGTCGTGCTCGATGAGGCGGATAGCATGACGCAGGATGCGCA 10670 Query 254261 GTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTG 254320 | || |||||| | |||||||||||| |||| | ||||| || || |||||||| Sbjct 10669 GAGTGCGCTCCGCAGGACGATGGAGACGTACTCGAAGATCACGCGCTTCTGTCTGGTGTG 10610 Query 254321 CAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 ||| ||||| || ||||||| ||||||||| ||||| ||||| || |||| Sbjct 10609 CAATTACGTCACGCGCATCATCGACCCGCTGGCGAGCAGGTGCAGTAAGTTCCGGTTCA 10551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073753206430912